RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
RAB43-204ENST00000393307 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
RAB43-204ENST00000393307 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
RAB43-204ENST00000393307 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
RAB43-204ENST00000393307 ABCC9O60706 1549 aa21.85■■□□□ 1.09
RAB43-204ENST00000393307 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
RAB43-204ENST00000393307 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
RAB43-204ENST00000393307 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
RAB43-204ENST00000393307 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
RAB43-204ENST00000393307 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
RAB43-204ENST00000393307 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
RAB43-204ENST00000393307 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
RAB43-204ENST00000393307 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
RAB43-204ENST00000393307 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
RAB43-204ENST00000393307 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
RAB43-204ENST00000393307 HRCP23327 699 aa20.46■□□□□ 0.87
RAB43-204ENST00000393307 NACADO15069 1562 aa20.45■□□□□ 0.87
RAB43-204ENST00000393307 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
RAB43-204ENST00000393307 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
RAB43-204ENST00000393307 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
RAB43-204ENST00000393307 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
RAB43-204ENST00000393307 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
RAB43-204ENST00000393307 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
RAB43-204ENST00000393307 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
RAB43-204ENST00000393307 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
RAB43-204ENST00000393307 APLP2Q06481 763 aa20.16■□□□□ 0.82
RAB43-204ENST00000393307 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
RAB43-204ENST00000393307 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
RAB43-204ENST00000393307 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
RAB43-204ENST00000393307 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
RAB43-204ENST00000393307 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
RAB43-204ENST00000393307 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
RAB43-204ENST00000393307 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
RAB43-204ENST00000393307 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
RAB43-204ENST00000393307 WIZO95785 1651 aa19.61■□□□□ 0.73
RAB43-204ENST00000393307 FBLN2P98095 1184 aa19.56■□□□□ 0.72
RAB43-204ENST00000393307 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
RAB43-204ENST00000393307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
RAB43-204ENST00000393307 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
RAB43-204ENST00000393307 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
RAB43-204ENST00000393307 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
RAB43-204ENST00000393307 ITGAEP38570 1179 aa19.51■□□□□ 0.71
RAB43-204ENST00000393307 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
RAB43-204ENST00000393307 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RAB43-204ENST00000393307 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
RAB43-204ENST00000393307 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
RAB43-204ENST00000393307 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
RAB43-204ENST00000393307 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
RAB43-204ENST00000393307 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
RAB43-204ENST00000393307 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
RAB43-204ENST00000393307 SOGA1O94964 1423 aa19.23■□□□□ 0.67
RAB43-204ENST00000393307 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
RAB43-204ENST00000393307 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
RAB43-204ENST00000393307 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.66
RAB43-204ENST00000393307 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
RAB43-204ENST00000393307 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
RAB43-204ENST00000393307 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
RAB43-204ENST00000393307 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
RAB43-204ENST00000393307 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
RAB43-204ENST00000393307 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
RAB43-204ENST00000393307 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
RAB43-204ENST00000393307 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
RAB43-204ENST00000393307 EEA1Q15075 1411 aa19.01■□□□□ 0.63
RAB43-204ENST00000393307 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
RAB43-204ENST00000393307 CLIP1P30622 1438 aa19■□□□□ 0.63
RAB43-204ENST00000393307 CUX2O14529 1486 aa19■□□□□ 0.63
RAB43-204ENST00000393307 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
RAB43-204ENST00000393307 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
RAB43-204ENST00000393307 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
RAB43-204ENST00000393307 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
RAB43-204ENST00000393307 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
RAB43-204ENST00000393307 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
RAB43-204ENST00000393307 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.62
RAB43-204ENST00000393307 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
RAB43-204ENST00000393307 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
RAB43-204ENST00000393307 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
RAB43-204ENST00000393307 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
RAB43-204ENST00000393307 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
RAB43-204ENST00000393307 NESP48681 1621 aa18.83■□□□□ 0.61
RAB43-204ENST00000393307 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.61
RAB43-204ENST00000393307 TRIM52Q96A61 297 aa18.79■□□□□ 0.6
RAB43-204ENST00000393307 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
RAB43-204ENST00000393307 MYT1Q01538 1121 aa18.76■□□□□ 0.59
RAB43-204ENST00000393307 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
RAB43-204ENST00000393307 CFTRP13569 1480 aa18.7■□□□□ 0.58
RAB43-204ENST00000393307 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
RAB43-204ENST00000393307 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
RAB43-204ENST00000393307 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
RAB43-204ENST00000393307 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
RAB43-204ENST00000393307 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
RAB43-204ENST00000393307 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
RAB43-204ENST00000393307 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
RAB43-204ENST00000393307 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
RAB43-204ENST00000393307 IGF1RP08069 1367 aa18.58■□□□□ 0.56
RAB43-204ENST00000393307 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
RAB43-204ENST00000393307 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
RAB43-204ENST00000393307 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
RAB43-204ENST00000393307 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
RAB43-204ENST00000393307 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
RAB43-204ENST00000393307 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms