RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
RAB43-204ENST00000393307 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
RAB43-204ENST00000393307 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
RAB43-204ENST00000393307 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
RAB43-204ENST00000393307 ABCC9O60706 1549 aa21.85■■□□□ 1.09
RAB43-204ENST00000393307 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
RAB43-204ENST00000393307 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
RAB43-204ENST00000393307 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
RAB43-204ENST00000393307 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
RAB43-204ENST00000393307 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
RAB43-204ENST00000393307 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
RAB43-204ENST00000393307 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
RAB43-204ENST00000393307 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
RAB43-204ENST00000393307 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
RAB43-204ENST00000393307 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
RAB43-204ENST00000393307 HRCP23327 699 aa20.46■□□□□ 0.87
RAB43-204ENST00000393307 NACADO15069 1562 aa20.45■□□□□ 0.87
RAB43-204ENST00000393307 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
RAB43-204ENST00000393307 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
RAB43-204ENST00000393307 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
RAB43-204ENST00000393307 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
RAB43-204ENST00000393307 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
RAB43-204ENST00000393307 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
RAB43-204ENST00000393307 PCGF6Q9BYE7 350 aa20.19■□□□□ 0.82
RAB43-204ENST00000393307 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
RAB43-204ENST00000393307 APLP2Q06481 763 aa20.16■□□□□ 0.82
RAB43-204ENST00000393307 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
RAB43-204ENST00000393307 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
RAB43-204ENST00000393307 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
RAB43-204ENST00000393307 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
RAB43-204ENST00000393307 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
RAB43-204ENST00000393307 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
RAB43-204ENST00000393307 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
RAB43-204ENST00000393307 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
RAB43-204ENST00000393307 WIZO95785 1651 aa19.61■□□□□ 0.73
RAB43-204ENST00000393307 FBLN2P98095 1184 aa19.56■□□□□ 0.72
RAB43-204ENST00000393307 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
RAB43-204ENST00000393307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
RAB43-204ENST00000393307 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
RAB43-204ENST00000393307 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
RAB43-204ENST00000393307 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
RAB43-204ENST00000393307 ITGAEP38570 1179 aa19.51■□□□□ 0.71
RAB43-204ENST00000393307 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
RAB43-204ENST00000393307 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RAB43-204ENST00000393307 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
RAB43-204ENST00000393307 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
RAB43-204ENST00000393307 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
RAB43-204ENST00000393307 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
RAB43-204ENST00000393307 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
RAB43-204ENST00000393307 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
RAB43-204ENST00000393307 SOGA1O94964 1423 aa19.23■□□□□ 0.67
RAB43-204ENST00000393307 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
RAB43-204ENST00000393307 EIF4G1Q04637 1599 aaKnown RBP19.16■□□□□ 0.66
RAB43-204ENST00000393307 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.66
RAB43-204ENST00000393307 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
RAB43-204ENST00000393307 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
RAB43-204ENST00000393307 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
RAB43-204ENST00000393307 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
RAB43-204ENST00000393307 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
RAB43-204ENST00000393307 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
RAB43-204ENST00000393307 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
RAB43-204ENST00000393307 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
RAB43-204ENST00000393307 EEA1Q15075 1411 aa19.01■□□□□ 0.63
RAB43-204ENST00000393307 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
RAB43-204ENST00000393307 CLIP1P30622 1438 aa19■□□□□ 0.63
RAB43-204ENST00000393307 CUX2O14529 1486 aa19■□□□□ 0.63
RAB43-204ENST00000393307 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
RAB43-204ENST00000393307 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
RAB43-204ENST00000393307 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
RAB43-204ENST00000393307 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
RAB43-204ENST00000393307 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
RAB43-204ENST00000393307 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
RAB43-204ENST00000393307 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.62
RAB43-204ENST00000393307 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
RAB43-204ENST00000393307 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
RAB43-204ENST00000393307 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
RAB43-204ENST00000393307 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
RAB43-204ENST00000393307 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
RAB43-204ENST00000393307 NESP48681 1621 aa18.83■□□□□ 0.61
RAB43-204ENST00000393307 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.61
RAB43-204ENST00000393307 TRIM52Q96A61 297 aa18.79■□□□□ 0.6
RAB43-204ENST00000393307 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
RAB43-204ENST00000393307 MYT1Q01538 1121 aa18.76■□□□□ 0.59
RAB43-204ENST00000393307 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
RAB43-204ENST00000393307 CFTRP13569 1480 aa18.7■□□□□ 0.58
RAB43-204ENST00000393307 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
RAB43-204ENST00000393307 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
RAB43-204ENST00000393307 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
RAB43-204ENST00000393307 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
RAB43-204ENST00000393307 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
RAB43-204ENST00000393307 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
RAB43-204ENST00000393307 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
RAB43-204ENST00000393307 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
RAB43-204ENST00000393307 IGF1RP08069 1367 aa18.58■□□□□ 0.56
RAB43-204ENST00000393307 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
RAB43-204ENST00000393307 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
RAB43-204ENST00000393307 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
RAB43-204ENST00000393307 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
RAB43-204ENST00000393307 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
RAB43-204ENST00000393307 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms