Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.22e-17■■■□□ 18.2
LARP4Q71RC2 SDF4-206ENST00000478938 2591 ntTSL 221.09■□□□□ 0.972e-17■■■□□ 18.2
LARP4Q71RC2 SDF4-205ENST00000465727 2095 ntTSL 219.84■□□□□ 0.772e-17■■■□□ 18.2
LARP4Q71RC2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.332e-17■■■□□ 18.2
LARP4Q71RC2 SDF4-207ENST00000494748 3516 ntTSL 215.47■□□□□ 0.072e-17■■■□□ 18.2
LARP4Q71RC2 COPE-208ENST00000598969 1770 ntTSL 520.11■□□□□ 0.815e-12■■■□□ 18.2
LARP4Q71RC2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.295e-12■■■□□ 18.2
LARP4Q71RC2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.88■□□□□ 0.295e-12■■■□□ 18.2
LARP4Q71RC2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.28■□□□□ 0.25e-12■■■□□ 18.2
LARP4Q71RC2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.05□□□□□ -0.165e-12■■■□□ 18.2
LARP4Q71RC2 COPE-205ENST00000595984 434 ntTSL 311.3□□□□□ -0.65e-12■■■□□ 18.2
LARP4Q71RC2 COPE-210ENST00000600528 261 ntTSL 38.56□□□□□ -1.045e-12■■■□□ 18.2
LARP4Q71RC2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.292e-8■■■□□ 18.2
LARP4Q71RC2 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC11.31□□□□□ -0.62e-8■■■□□ 18.2
LARP4Q71RC2 SNRPD2-204ENST00000587367 596 ntTSL 3 BASIC10.09□□□□□ -0.792e-8■■■□□ 18.2
LARP4Q71RC2 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC9.43□□□□□ -0.92e-8■■■□□ 18.2
LARP4Q71RC2 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.942e-8■■■□□ 18.2
LARP4Q71RC2 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC8.64□□□□□ -1.032e-8■■■□□ 18.2
LARP4Q71RC2 AKR1B1-203ENST00000434222 1852 ntTSL 513.61□□□□□ -0.232e-7■■■□□ 18.2
LARP4Q71RC2 AKR1B1-205ENST00000465351 1930 ntTSL 1 (best)12.56□□□□□ -0.42e-7■■■□□ 18.2
LARP4Q71RC2 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.622e-7■■■□□ 18.2
LARP4Q71RC2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-8■■■□□ 18.2
LARP4Q71RC2 GABARAP-202ENST00000570856 583 ntTSL 212.97□□□□□ -0.332e-8■■■□□ 18.2
LARP4Q71RC2 AC120057.3-201ENST00000570760 776 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.552e-8■■■□□ 18.2
LARP4Q71RC2 GABARAP-206ENST00000577035 762 ntTSL 2 BASIC11.13□□□□□ -0.632e-8■■■□□ 18.2
LARP4Q71RC2 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC11.06□□□□□ -0.642e-8■■■□□ 18.2
LARP4Q71RC2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.068e-21■■■□□ 18.2
LARP4Q71RC2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.062e-6■■■□□ 18.2
LARP4Q71RC2 PRKACA-202ENST00000350356 3105 ntTSL 29.89□□□□□ -0.832e-6■■■□□ 18.2
LARP4Q71RC2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.133e-6■■■□□ 18.2
LARP4Q71RC2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.642e-7■■■□□ 18.2
LARP4Q71RC2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC8.68□□□□□ -1.022e-7■■■□□ 18.2
LARP4Q71RC2 NCSTN-212ENST00000469159 856 ntTSL 26.98□□□□□ -1.294e-9■■■□□ 18.2
LARP4Q71RC2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.119e-8■■■□□ 18.2
LARP4Q71RC2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.01□□□□□ -0.179e-8■■■□□ 18.2
LARP4Q71RC2 ARHGDIA-205ENST00000579121 637 ntTSL 314.44□□□□□ -0.14e-7■■■□□ 18.1
LARP4Q71RC2 DAPK1-206ENST00000469067 2499 ntTSL 216.77■□□□□ 0.272e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.5■□□□□ 0.232e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.162e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-217ENST00000496522 579 ntTSL 214.53□□□□□ -0.082e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-210ENST00000472344 548 ntTSL 513.47□□□□□ -0.252e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.462e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC11.7□□□□□ -0.542e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.622e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-15■■■□□ 18.1
LARP4Q71RC2 DAPK1-212ENST00000489291 4334 ntTSL 1 (best)9.51□□□□□ -0.892e-15■■■□□ 18.1
LARP4Q71RC2 AL161787.1-201ENST00000401543 174 ntBASIC7.53□□□□□ -1.22e-15■■■□□ 18.1
LARP4Q71RC2 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.79□□□□□ -1.165e-8■■■□□ 18.1
LARP4Q71RC2 IMP4-208ENST00000460766 2379 ntTSL 1 (best)20.49■□□□□ 0.876e-9■■■□□ 18.1
LARP4Q71RC2 IMP4-210ENST00000462392 1793 ntTSL 320.02■□□□□ 0.86e-9■■■□□ 18.1
LARP4Q71RC2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.3■□□□□ 0.366e-9■■■□□ 18.1
LARP4Q71RC2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.346e-9■■■□□ 18.1
LARP4Q71RC2 UBE2I-218ENST00000568288 501 ntTSL 516.51■□□□□ 0.238e-17■■■□□ 18.1
LARP4Q71RC2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.38■□□□□ 0.056e-9■■■□□ 18.1
LARP4Q71RC2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.026e-9■■■□□ 18.1
LARP4Q71RC2 IMP4-204ENST00000428740 924 ntTSL 313.71□□□□□ -0.216e-9■■■□□ 18.1
LARP4Q71RC2 IMP4-207ENST00000460100 721 ntTSL 313.36□□□□□ -0.276e-9■■■□□ 18.1
LARP4Q71RC2 UBE2I-219ENST00000568989 498 ntTSL 212.26□□□□□ -0.458e-17■■■□□ 18.1
LARP4Q71RC2 IMP4-205ENST00000452955 923 ntTSL 310.95□□□□□ -0.666e-9■■■□□ 18.1
LARP4Q71RC2 IMP4-214ENST00000475074 512 ntTSL 210.58□□□□□ -0.726e-9■■■□□ 18.1
LARP4Q71RC2 CKS1B-206ENST00000474215 739 ntTSL 310.22□□□□□ -0.776e-9■■■□□ 18.1
LARP4Q71RC2 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.96e-9■■■□□ 18.1
LARP4Q71RC2 TTC1-205ENST00000522793 1432 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.916e-9■■■□□ 18.1
LARP4Q71RC2 TXN2-203ENST00000411915 570 ntTSL 59.25□□□□□ -0.936e-9■■■□□ 18.1
LARP4Q71RC2 ALG8-220ENST00000532552 645 ntTSL 58.82□□□□□ -16e-9■■■□□ 18.1
LARP4Q71RC2 TTC1-202ENST00000518560 543 ntTSL 58.75□□□□□ -1.016e-9■■■□□ 18.1
LARP4Q71RC2 TTC1-204ENST00000522073 1119 ntTSL 26.91□□□□□ -1.36e-9■■■□□ 18.1
LARP4Q71RC2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.656e-9■■■□□ 18.1
LARP4Q71RC2 CKS1B-207ENST00000477676 602 ntTSL 34.69□□□□□ -1.666e-9■■■□□ 18.1
LARP4Q71RC2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.072e-7■■■□□ 18.1
LARP4Q71RC2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.542e-7■■■□□ 18.1
LARP4Q71RC2 HNRNPM-214ENST00000600806 2373 ntTSL 517.89■□□□□ 0.452e-7■■■□□ 18.1
LARP4Q71RC2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.352e-7■■■□□ 18.1
LARP4Q71RC2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.952e-9■■■□□ 18.1
LARP4Q71RC2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.412e-9■■■□□ 18.1
LARP4Q71RC2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-9■■■□□ 18.1
LARP4Q71RC2 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.353e-7■■■□□ 18.1
LARP4Q71RC2 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.633e-7■■■□□ 18.1
LARP4Q71RC2 USMG5-204ENST00000369815 626 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.843e-7■■■□□ 18.1
LARP4Q71RC2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.523e-7■■■□□ 18.1
LARP4Q71RC2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.523e-7■■■□□ 18.1
LARP4Q71RC2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.882e-6■■■□□ 18.1
LARP4Q71RC2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.032e-6■■■□□ 18.1
LARP4Q71RC2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.422e-7■■■□□ 18
LARP4Q71RC2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.412e-7■■■□□ 18
LARP4Q71RC2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-13■■■□□ 18
LARP4Q71RC2 UQCRC1-203ENST00000415995 1387 ntTSL 515.29■□□□□ 0.041e-13■■■□□ 18
LARP4Q71RC2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.44□□□□□ -0.262e-7■■■□□ 18
LARP4Q71RC2 UQCRC1-209ENST00000480561 1014 ntTSL 212.9□□□□□ -0.341e-13■■■□□ 18
LARP4Q71RC2 UQCRC1-207ENST00000471189 955 ntTSL 312.09□□□□□ -0.471e-13■■■□□ 18
LARP4Q71RC2 OAZ1-204ENST00000588673 780 ntTSL 318.75■□□□□ 0.594e-11■■■□□ 18
LARP4Q71RC2 OAZ1-205ENST00000589361 679 ntTSL 1 (best)14.87□□□□□ -0.032e-7■■■□□ 18
LARP4Q71RC2 CUTA-208ENST00000482684 837 ntTSL 1 (best)19.27■□□□□ 0.682e-9■■■□□ 18
LARP4Q71RC2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.122e-9■■■□□ 18
LARP4Q71RC2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.342e-9■■■□□ 18
LARP4Q71RC2 CUTA-201ENST00000374484 658 ntTSL 312.43□□□□□ -0.422e-9■■■□□ 18
LARP4Q71RC2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.43□□□□□ -0.422e-9■■■□□ 18
LARP4Q71RC2 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.512e-9■■■□□ 18
LARP4Q71RC2 CUTA-206ENST00000465956 961 ntTSL 211.04□□□□□ -0.642e-9■■■□□ 18
LARP4Q71RC2 CUTA-209ENST00000487637 1378 ntTSL 210.89□□□□□ -0.672e-9■■■□□ 18
Retrieved 100 of 15,922 protein–RNA pairs in 248.6 ms