RNA–Protein interactions for RNA: ENST00000585392.2

SNRPD2-203, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-203ENST00000585392 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
SNRPD2-203ENST00000585392 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
SNRPD2-203ENST00000585392 ABCC9O60706 1549 aa27.03■■□□□ 1.92
SNRPD2-203ENST00000585392 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
SNRPD2-203ENST00000585392 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
SNRPD2-203ENST00000585392 NACADO15069 1562 aa25.75■■□□□ 1.71
SNRPD2-203ENST00000585392 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
SNRPD2-203ENST00000585392 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
SNRPD2-203ENST00000585392 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
SNRPD2-203ENST00000585392 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
SNRPD2-203ENST00000585392 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
SNRPD2-203ENST00000585392 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
SNRPD2-203ENST00000585392 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
SNRPD2-203ENST00000585392 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
SNRPD2-203ENST00000585392 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
SNRPD2-203ENST00000585392 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
SNRPD2-203ENST00000585392 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
SNRPD2-203ENST00000585392 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
SNRPD2-203ENST00000585392 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
SNRPD2-203ENST00000585392 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
SNRPD2-203ENST00000585392 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
SNRPD2-203ENST00000585392 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
SNRPD2-203ENST00000585392 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
SNRPD2-203ENST00000585392 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
SNRPD2-203ENST00000585392 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
SNRPD2-203ENST00000585392 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
SNRPD2-203ENST00000585392 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
SNRPD2-203ENST00000585392 NESP48681 1621 aa23.32■■□□□ 1.32
SNRPD2-203ENST00000585392 WIZO95785 1651 aa23.28■■□□□ 1.32
SNRPD2-203ENST00000585392 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
SNRPD2-203ENST00000585392 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
SNRPD2-203ENST00000585392 LAMC3Q9Y6N6 1575 aa23.17■■□□□ 1.3
SNRPD2-203ENST00000585392 CUX2O14529 1486 aa23.17■■□□□ 1.3
SNRPD2-203ENST00000585392 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
SNRPD2-203ENST00000585392 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
SNRPD2-203ENST00000585392 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
SNRPD2-203ENST00000585392 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
SNRPD2-203ENST00000585392 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
SNRPD2-203ENST00000585392 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
SNRPD2-203ENST00000585392 CFTRP13569 1480 aa22.92■■□□□ 1.26
SNRPD2-203ENST00000585392 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
SNRPD2-203ENST00000585392 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
SNRPD2-203ENST00000585392 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
SNRPD2-203ENST00000585392 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
SNRPD2-203ENST00000585392 WDR62O43379 1518 aa22.73■■□□□ 1.23
SNRPD2-203ENST00000585392 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
SNRPD2-203ENST00000585392 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
SNRPD2-203ENST00000585392 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
SNRPD2-203ENST00000585392 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
SNRPD2-203ENST00000585392 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
SNRPD2-203ENST00000585392 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
SNRPD2-203ENST00000585392 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
SNRPD2-203ENST00000585392 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
SNRPD2-203ENST00000585392 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
SNRPD2-203ENST00000585392 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
SNRPD2-203ENST00000585392 SOGA1O94964 1423 aa22.17■■□□□ 1.14
SNRPD2-203ENST00000585392 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
SNRPD2-203ENST00000585392 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
SNRPD2-203ENST00000585392 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
SNRPD2-203ENST00000585392 CUX1P39880 1505 aa22.12■■□□□ 1.13
SNRPD2-203ENST00000585392 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
SNRPD2-203ENST00000585392 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
SNRPD2-203ENST00000585392 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
SNRPD2-203ENST00000585392 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
SNRPD2-203ENST00000585392 FBLN2P98095 1184 aa21.97■■□□□ 1.11
SNRPD2-203ENST00000585392 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
SNRPD2-203ENST00000585392 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
SNRPD2-203ENST00000585392 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
SNRPD2-203ENST00000585392 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
SNRPD2-203ENST00000585392 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
SNRPD2-203ENST00000585392 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
SNRPD2-203ENST00000585392 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
SNRPD2-203ENST00000585392 CHD1O14646 1710 aa21.84■■□□□ 1.09
SNRPD2-203ENST00000585392 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
SNRPD2-203ENST00000585392 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
SNRPD2-203ENST00000585392 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
SNRPD2-203ENST00000585392 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
SNRPD2-203ENST00000585392 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
SNRPD2-203ENST00000585392 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
SNRPD2-203ENST00000585392 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
SNRPD2-203ENST00000585392 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
SNRPD2-203ENST00000585392 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
SNRPD2-203ENST00000585392 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
SNRPD2-203ENST00000585392 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
SNRPD2-203ENST00000585392 PBRM1Q86U86 1689 aa21.7■■□□□ 1.06
SNRPD2-203ENST00000585392 CLASP1Q7Z460 1538 aa21.66■■□□□ 1.06
SNRPD2-203ENST00000585392 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
SNRPD2-203ENST00000585392 FHAD1B1AJZ9 1412 aa21.6■■□□□ 1.05
SNRPD2-203ENST00000585392 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
SNRPD2-203ENST00000585392 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
SNRPD2-203ENST00000585392 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
SNRPD2-203ENST00000585392 NUP160Q12769 1436 aa21.54■■□□□ 1.04
SNRPD2-203ENST00000585392 IGF1RP08069 1367 aa21.51■■□□□ 1.03
SNRPD2-203ENST00000585392 CEP170Q5SW79 1584 aa21.47■■□□□ 1.03
SNRPD2-203ENST00000585392 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
SNRPD2-203ENST00000585392 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
SNRPD2-203ENST00000585392 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
SNRPD2-203ENST00000585392 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
SNRPD2-203ENST00000585392 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
SNRPD2-203ENST00000585392 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms