RNA–Protein interactions for RNA: ENST00000587367.5

SNRPD2-204, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-204ENST00000587367 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
SNRPD2-204ENST00000587367 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
SNRPD2-204ENST00000587367 ABCC9O60706 1549 aa23.53■■□□□ 1.36
SNRPD2-204ENST00000587367 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
SNRPD2-204ENST00000587367 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
SNRPD2-204ENST00000587367 NACADO15069 1562 aa22.46■■□□□ 1.19
SNRPD2-204ENST00000587367 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
SNRPD2-204ENST00000587367 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
SNRPD2-204ENST00000587367 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
SNRPD2-204ENST00000587367 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
SNRPD2-204ENST00000587367 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
SNRPD2-204ENST00000587367 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
SNRPD2-204ENST00000587367 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
SNRPD2-204ENST00000587367 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
SNRPD2-204ENST00000587367 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
SNRPD2-204ENST00000587367 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
SNRPD2-204ENST00000587367 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
SNRPD2-204ENST00000587367 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
SNRPD2-204ENST00000587367 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
SNRPD2-204ENST00000587367 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
SNRPD2-204ENST00000587367 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
SNRPD2-204ENST00000587367 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
SNRPD2-204ENST00000587367 NCAPD3P42695 1498 aa20.67■□□□□ 0.9
SNRPD2-204ENST00000587367 HMGXB3Q12766 1538 aa20.6■□□□□ 0.89
SNRPD2-204ENST00000587367 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
SNRPD2-204ENST00000587367 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
SNRPD2-204ENST00000587367 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
SNRPD2-204ENST00000587367 WIZO95785 1651 aa20.42■□□□□ 0.86
SNRPD2-204ENST00000587367 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
SNRPD2-204ENST00000587367 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
SNRPD2-204ENST00000587367 NESP48681 1621 aa20.27■□□□□ 0.84
SNRPD2-204ENST00000587367 LAMC3Q9Y6N6 1575 aa20.22■□□□□ 0.83
SNRPD2-204ENST00000587367 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
SNRPD2-204ENST00000587367 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
SNRPD2-204ENST00000587367 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
SNRPD2-204ENST00000587367 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
SNRPD2-204ENST00000587367 CUX2O14529 1486 aa20.09■□□□□ 0.81
SNRPD2-204ENST00000587367 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
SNRPD2-204ENST00000587367 CFTRP13569 1480 aa19.92■□□□□ 0.78
SNRPD2-204ENST00000587367 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
SNRPD2-204ENST00000587367 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
SNRPD2-204ENST00000587367 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
SNRPD2-204ENST00000587367 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
SNRPD2-204ENST00000587367 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
SNRPD2-204ENST00000587367 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
SNRPD2-204ENST00000587367 WDR62O43379 1518 aa19.81■□□□□ 0.76
SNRPD2-204ENST00000587367 URB2Q14146 1524 aaKnown RBP19.67■□□□□ 0.74
SNRPD2-204ENST00000587367 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
SNRPD2-204ENST00000587367 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
SNRPD2-204ENST00000587367 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
SNRPD2-204ENST00000587367 DNMBPQ6XZF7 1577 aa19.54■□□□□ 0.72
SNRPD2-204ENST00000587367 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
SNRPD2-204ENST00000587367 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
SNRPD2-204ENST00000587367 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
SNRPD2-204ENST00000587367 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
SNRPD2-204ENST00000587367 CUX1P39880 1505 aa19.34■□□□□ 0.69
SNRPD2-204ENST00000587367 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.69
SNRPD2-204ENST00000587367 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
SNRPD2-204ENST00000587367 SOGA1O94964 1423 aa19.32■□□□□ 0.68
SNRPD2-204ENST00000587367 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
SNRPD2-204ENST00000587367 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.67
SNRPD2-204ENST00000587367 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
SNRPD2-204ENST00000587367 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
SNRPD2-204ENST00000587367 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
SNRPD2-204ENST00000587367 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
SNRPD2-204ENST00000587367 FBLN2P98095 1184 aa19.19■□□□□ 0.66
SNRPD2-204ENST00000587367 CHD1O14646 1710 aa19.18■□□□□ 0.66
SNRPD2-204ENST00000587367 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SNRPD2-204ENST00000587367 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
SNRPD2-204ENST00000587367 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
SNRPD2-204ENST00000587367 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
SNRPD2-204ENST00000587367 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
SNRPD2-204ENST00000587367 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
SNRPD2-204ENST00000587367 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
SNRPD2-204ENST00000587367 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SNRPD2-204ENST00000587367 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
SNRPD2-204ENST00000587367 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
SNRPD2-204ENST00000587367 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
SNRPD2-204ENST00000587367 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
SNRPD2-204ENST00000587367 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
SNRPD2-204ENST00000587367 RIMBP3CA6NJZ7 1639 aa18.98■□□□□ 0.63
SNRPD2-204ENST00000587367 RIMBP3BA6NNM3 1639 aa18.98■□□□□ 0.63
SNRPD2-204ENST00000587367 RIMBP3Q9UFD9 1639 aa18.98■□□□□ 0.63
SNRPD2-204ENST00000587367 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
SNRPD2-204ENST00000587367 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
SNRPD2-204ENST00000587367 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
SNRPD2-204ENST00000587367 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
SNRPD2-204ENST00000587367 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
SNRPD2-204ENST00000587367 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
SNRPD2-204ENST00000587367 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
SNRPD2-204ENST00000587367 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
SNRPD2-204ENST00000587367 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
SNRPD2-204ENST00000587367 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
SNRPD2-204ENST00000587367 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SNRPD2-204ENST00000587367 NUP160Q12769 1436 aa18.73■□□□□ 0.59
SNRPD2-204ENST00000587367 IGF1RP08069 1367 aa18.68■□□□□ 0.58
SNRPD2-204ENST00000587367 CARMIL1Q5VZK9 1371 aa18.63■□□□□ 0.57
SNRPD2-204ENST00000587367 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
SNRPD2-204ENST00000587367 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
SNRPD2-204ENST00000587367 ERCC6L2Q5T890 1561 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms