RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
IMP4-214ENST00000475074 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
IMP4-214ENST00000475074 ABCC9O60706 1549 aa21.81■■□□□ 1.08
IMP4-214ENST00000475074 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
IMP4-214ENST00000475074 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
IMP4-214ENST00000475074 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
IMP4-214ENST00000475074 NACADO15069 1562 aa21.45■■□□□ 1.02
IMP4-214ENST00000475074 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
IMP4-214ENST00000475074 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
IMP4-214ENST00000475074 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
IMP4-214ENST00000475074 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
IMP4-214ENST00000475074 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
IMP4-214ENST00000475074 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
IMP4-214ENST00000475074 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
IMP4-214ENST00000475074 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
IMP4-214ENST00000475074 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
IMP4-214ENST00000475074 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
IMP4-214ENST00000475074 SMARCA4P51532 1647 aa20.04■□□□□ 0.8
IMP4-214ENST00000475074 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
IMP4-214ENST00000475074 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
IMP4-214ENST00000475074 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
IMP4-214ENST00000475074 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
IMP4-214ENST00000475074 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
IMP4-214ENST00000475074 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
IMP4-214ENST00000475074 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
IMP4-214ENST00000475074 WIZO95785 1651 aa19.77■□□□□ 0.76
IMP4-214ENST00000475074 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
IMP4-214ENST00000475074 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
IMP4-214ENST00000475074 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
IMP4-214ENST00000475074 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
IMP4-214ENST00000475074 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
IMP4-214ENST00000475074 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
IMP4-214ENST00000475074 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
IMP4-214ENST00000475074 CFTRP13569 1480 aa19.2■□□□□ 0.66
IMP4-214ENST00000475074 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
IMP4-214ENST00000475074 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
IMP4-214ENST00000475074 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
IMP4-214ENST00000475074 NESP48681 1621 aa19.02■□□□□ 0.64
IMP4-214ENST00000475074 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
IMP4-214ENST00000475074 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
IMP4-214ENST00000475074 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
IMP4-214ENST00000475074 ABCC8Q09428 1581 aa18.83■□□□□ 0.6
IMP4-214ENST00000475074 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
IMP4-214ENST00000475074 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
IMP4-214ENST00000475074 MRC2Q9UBG0 1479 aa18.77■□□□□ 0.59
IMP4-214ENST00000475074 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
IMP4-214ENST00000475074 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
IMP4-214ENST00000475074 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
IMP4-214ENST00000475074 BIVM-ERCC5R4GMW8 1640 aa18.73■□□□□ 0.59
IMP4-214ENST00000475074 CUX1P39880 1505 aa18.72■□□□□ 0.59
IMP4-214ENST00000475074 WDR62O43379 1518 aa18.7■□□□□ 0.58
IMP4-214ENST00000475074 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
IMP4-214ENST00000475074 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
IMP4-214ENST00000475074 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
IMP4-214ENST00000475074 THOC2Q8NI27 1593 aaKnown RBP18.69■□□□□ 0.58
IMP4-214ENST00000475074 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
IMP4-214ENST00000475074 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.56
IMP4-214ENST00000475074 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
IMP4-214ENST00000475074 CUX2O14529 1486 aa18.52■□□□□ 0.56
IMP4-214ENST00000475074 SOGA1O94964 1423 aa18.5■□□□□ 0.55
IMP4-214ENST00000475074 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
IMP4-214ENST00000475074 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
IMP4-214ENST00000475074 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
IMP4-214ENST00000475074 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
IMP4-214ENST00000475074 EEA1Q15075 1411 aa18.43■□□□□ 0.54
IMP4-214ENST00000475074 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
IMP4-214ENST00000475074 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
IMP4-214ENST00000475074 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
IMP4-214ENST00000475074 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
IMP4-214ENST00000475074 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
IMP4-214ENST00000475074 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
IMP4-214ENST00000475074 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
IMP4-214ENST00000475074 EIF4G3O43432 1585 aaKnown RBP18.27■□□□□ 0.52
IMP4-214ENST00000475074 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.51
IMP4-214ENST00000475074 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
IMP4-214ENST00000475074 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
IMP4-214ENST00000475074 IGF1RP08069 1367 aa18.25■□□□□ 0.51
IMP4-214ENST00000475074 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.51
IMP4-214ENST00000475074 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
IMP4-214ENST00000475074 CUL7Q14999 1698 aa18.21■□□□□ 0.51
IMP4-214ENST00000475074 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
IMP4-214ENST00000475074 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
IMP4-214ENST00000475074 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
IMP4-214ENST00000475074 KIF21BO75037 1637 aa18.15■□□□□ 0.5
IMP4-214ENST00000475074 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
IMP4-214ENST00000475074 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
IMP4-214ENST00000475074 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
IMP4-214ENST00000475074 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
IMP4-214ENST00000475074 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
IMP4-214ENST00000475074 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
IMP4-214ENST00000475074 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
IMP4-214ENST00000475074 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
IMP4-214ENST00000475074 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
IMP4-214ENST00000475074 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
IMP4-214ENST00000475074 NUP160Q12769 1436 aa17.93■□□□□ 0.46
IMP4-214ENST00000475074 CHD1O14646 1710 aa17.92■□□□□ 0.46
IMP4-214ENST00000475074 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
IMP4-214ENST00000475074 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
IMP4-214ENST00000475074 KIAA0586Q9BVV6 1533 aa17.89■□□□□ 0.45
IMP4-214ENST00000475074 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms