RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
COPE-210ENST00000600528 ABCC9O60706 1549 aa21.86■■□□□ 1.09
COPE-210ENST00000600528 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
COPE-210ENST00000600528 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
COPE-210ENST00000600528 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
COPE-210ENST00000600528 NACADO15069 1562 aa20.49■□□□□ 0.87
COPE-210ENST00000600528 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.851e-10■■■■□ 21.1
COPE-210ENST00000600528 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
COPE-210ENST00000600528 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
COPE-210ENST00000600528 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
COPE-210ENST00000600528 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
COPE-210ENST00000600528 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
COPE-210ENST00000600528 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
COPE-210ENST00000600528 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
COPE-210ENST00000600528 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
COPE-210ENST00000600528 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
COPE-210ENST00000600528 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
COPE-210ENST00000600528 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
COPE-210ENST00000600528 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
COPE-210ENST00000600528 CUX2O14529 1486 aa19.03■□□□□ 0.64
COPE-210ENST00000600528 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
COPE-210ENST00000600528 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
COPE-210ENST00000600528 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
COPE-210ENST00000600528 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
COPE-210ENST00000600528 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
COPE-210ENST00000600528 NESP48681 1621 aa18.7■□□□□ 0.58
COPE-210ENST00000600528 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
COPE-210ENST00000600528 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
COPE-210ENST00000600528 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
COPE-210ENST00000600528 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
COPE-210ENST00000600528 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
COPE-210ENST00000600528 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
COPE-210ENST00000600528 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
COPE-210ENST00000600528 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
COPE-210ENST00000600528 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
COPE-210ENST00000600528 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
COPE-210ENST00000600528 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
COPE-210ENST00000600528 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
COPE-210ENST00000600528 WDR62O43379 1518 aa18.28■□□□□ 0.52
COPE-210ENST00000600528 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
COPE-210ENST00000600528 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
COPE-210ENST00000600528 WIZO95785 1651 aa18.12■□□□□ 0.49
COPE-210ENST00000600528 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
COPE-210ENST00000600528 CFTRP13569 1480 aa18.07■□□□□ 0.48
COPE-210ENST00000600528 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
COPE-210ENST00000600528 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
COPE-210ENST00000600528 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
COPE-210ENST00000600528 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
COPE-210ENST00000600528 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
COPE-210ENST00000600528 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
COPE-210ENST00000600528 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
COPE-210ENST00000600528 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
COPE-210ENST00000600528 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
COPE-210ENST00000600528 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
COPE-210ENST00000600528 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
COPE-210ENST00000600528 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
COPE-210ENST00000600528 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
COPE-210ENST00000600528 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
COPE-210ENST00000600528 ABCC8Q09428 1581 aa17.69■□□□□ 0.42
COPE-210ENST00000600528 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
COPE-210ENST00000600528 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
COPE-210ENST00000600528 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
COPE-210ENST00000600528 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
COPE-210ENST00000600528 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
COPE-210ENST00000600528 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
COPE-210ENST00000600528 CHD1O14646 1710 aa17.55■□□□□ 0.4
COPE-210ENST00000600528 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
COPE-210ENST00000600528 FBLN2P98095 1184 aa17.52■□□□□ 0.4
COPE-210ENST00000600528 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
COPE-210ENST00000600528 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
COPE-210ENST00000600528 SOGA1O94964 1423 aa17.46■□□□□ 0.39
COPE-210ENST00000600528 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
COPE-210ENST00000600528 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
COPE-210ENST00000600528 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
COPE-210ENST00000600528 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
COPE-210ENST00000600528 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
COPE-210ENST00000600528 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
COPE-210ENST00000600528 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
COPE-210ENST00000600528 GRIN2BQ13224 1484 aa17.33■□□□□ 0.37
COPE-210ENST00000600528 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
COPE-210ENST00000600528 CUX1P39880 1505 aa17.29■□□□□ 0.36
COPE-210ENST00000600528 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
COPE-210ENST00000600528 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
COPE-210ENST00000600528 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
COPE-210ENST00000600528 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
COPE-210ENST00000600528 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
COPE-210ENST00000600528 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
COPE-210ENST00000600528 NUP160Q12769 1436 aa17.09■□□□□ 0.33
COPE-210ENST00000600528 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
COPE-210ENST00000600528 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
COPE-210ENST00000600528 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
COPE-210ENST00000600528 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
COPE-210ENST00000600528 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
COPE-210ENST00000600528 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
COPE-210ENST00000600528 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
COPE-210ENST00000600528 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
COPE-210ENST00000600528 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
COPE-210ENST00000600528 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
COPE-210ENST00000600528 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
COPE-210ENST00000600528 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
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