RNA–Protein interactions for RNA: ENST00000600932.5

COPE-211, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5 BASIC

Gene COPE, Length 1,144 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-211ENST00000600932 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
COPE-211ENST00000600932 CCDC180Q9P1Z9 1646 aa37.77■■■■□ 3.64
COPE-211ENST00000600932 ABCC9O60706 1549 aa37.29■■■■□ 3.56
COPE-211ENST00000600932 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
COPE-211ENST00000600932 NACADO15069 1562 aa35.55■■■■□ 3.28
COPE-211ENST00000600932 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
COPE-211ENST00000600932 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
COPE-211ENST00000600932 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
COPE-211ENST00000600932 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
COPE-211ENST00000600932 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
COPE-211ENST00000600932 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.141e-10■■■■□ 21.1
COPE-211ENST00000600932 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
COPE-211ENST00000600932 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
COPE-211ENST00000600932 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
COPE-211ENST00000600932 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
COPE-211ENST00000600932 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
COPE-211ENST00000600932 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
COPE-211ENST00000600932 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
COPE-211ENST00000600932 SMARCA4P51532 1647 aa32.84■■■□□ 2.85
COPE-211ENST00000600932 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
COPE-211ENST00000600932 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
COPE-211ENST00000600932 BAZ1AQ9NRL2 1556 aaPredicted RBP32.71■■■□□ 2.83
COPE-211ENST00000600932 SMARCA2P51531 1590 aa32.7■■■□□ 2.82
COPE-211ENST00000600932 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
COPE-211ENST00000600932 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
COPE-211ENST00000600932 MROH2BQ7Z745 1585 aa32.46■■■□□ 2.79
COPE-211ENST00000600932 BAZ1BQ9UIG0 1483 aaKnown RBP32.44■■■□□ 2.78
COPE-211ENST00000600932 ERCC6Q03468 1493 aa32.18■■■□□ 2.74
COPE-211ENST00000600932 NESP48681 1621 aa32.14■■■□□ 2.74
COPE-211ENST00000600932 WIZO95785 1651 aa32.12■■■□□ 2.73
COPE-211ENST00000600932 CUX2O14529 1486 aa32.04■■■□□ 2.72
COPE-211ENST00000600932 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
COPE-211ENST00000600932 RSF1Q96T23 1441 aaPredicted RBP31.9■■■□□ 2.7
COPE-211ENST00000600932 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
COPE-211ENST00000600932 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
COPE-211ENST00000600932 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
COPE-211ENST00000600932 CADPSQ9ULU8 1353 aa31.77■■■□□ 2.68
COPE-211ENST00000600932 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
COPE-211ENST00000600932 CFTRP13569 1480 aa31.52■■■□□ 2.64
COPE-211ENST00000600932 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
COPE-211ENST00000600932 MRC2Q9UBG0 1479 aa31.51■■■□□ 2.63
COPE-211ENST00000600932 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
COPE-211ENST00000600932 WDR62O43379 1518 aa31.45■■■□□ 2.63
COPE-211ENST00000600932 FANCD2Q9BXW9 1451 aa31.44■■■□□ 2.62
COPE-211ENST00000600932 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
COPE-211ENST00000600932 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
COPE-211ENST00000600932 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
COPE-211ENST00000600932 URB2Q14146 1524 aaKnown RBP31.16■■■□□ 2.58
COPE-211ENST00000600932 TOPBP1Q92547 1522 aa30.89■■■□□ 2.54
COPE-211ENST00000600932 ABCC8Q09428 1581 aa30.86■■■□□ 2.53
COPE-211ENST00000600932 DNMBPQ6XZF7 1577 aa30.85■■■□□ 2.53
COPE-211ENST00000600932 IFT140Q96RY7 1462 aa30.81■■■□□ 2.52
COPE-211ENST00000600932 ZNF608Q9ULD9 1512 aaPredicted RBP30.7■■■□□ 2.51
COPE-211ENST00000600932 TARBP1Q13395 1621 aaKnown RBP30.63■■■□□ 2.49
COPE-211ENST00000600932 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
COPE-211ENST00000600932 POLA1P09884 1462 aaPredicted RBP30.6■■■□□ 2.49
COPE-211ENST00000600932 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
COPE-211ENST00000600932 CUX1P39880 1505 aa30.5■■■□□ 2.47
COPE-211ENST00000600932 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
COPE-211ENST00000600932 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
COPE-211ENST00000600932 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.463e-7■■■■□ 21.7
COPE-211ENST00000600932 SOGA1O94964 1423 aa30.42■■■□□ 2.46
COPE-211ENST00000600932 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
COPE-211ENST00000600932 CHD1O14646 1710 aa30.36■■■□□ 2.45
COPE-211ENST00000600932 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
COPE-211ENST00000600932 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
COPE-211ENST00000600932 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
COPE-211ENST00000600932 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
COPE-211ENST00000600932 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
COPE-211ENST00000600932 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
COPE-211ENST00000600932 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
COPE-211ENST00000600932 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
COPE-211ENST00000600932 GRIN2BQ13224 1484 aa30.16■■■□□ 2.42
COPE-211ENST00000600932 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
COPE-211ENST00000600932 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
COPE-211ENST00000600932 TOP2BQ02880 1626 aa30.14■■■□□ 2.41
COPE-211ENST00000600932 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
COPE-211ENST00000600932 ABCA5Q8WWZ7 1642 aa30.12■■■□□ 2.41
COPE-211ENST00000600932 FBLN2P98095 1184 aa30.11■■■□□ 2.41
COPE-211ENST00000600932 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
COPE-211ENST00000600932 WRNQ14191 1432 aaPredicted RBP eCLIP30.09■■■□□ 2.41
COPE-211ENST00000600932 GAPVD1Q14C86 1478 aa30.09■■■□□ 2.41
COPE-211ENST00000600932 SYNJ2O15056 1496 aa30.02■■■□□ 2.4
COPE-211ENST00000600932 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
COPE-211ENST00000600932 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
COPE-211ENST00000600932 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
COPE-211ENST00000600932 ARAP1Q96P48 1450 aa29.86■■■□□ 2.37
COPE-211ENST00000600932 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
COPE-211ENST00000600932 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
COPE-211ENST00000600932 GRIN2AQ12879 1464 aa29.78■■■□□ 2.36
COPE-211ENST00000600932 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
COPE-211ENST00000600932 CEP170Q5SW79 1584 aa29.68■■■□□ 2.34
COPE-211ENST00000600932 NUP160Q12769 1436 aa29.66■■■□□ 2.34
COPE-211ENST00000600932 SHROOM2Q13796 1616 aa29.55■■■□□ 2.32
COPE-211ENST00000600932 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
COPE-211ENST00000600932 KIF27Q86VH2 1401 aa29.5■■■□□ 2.31
COPE-211ENST00000600932 CUL7Q14999 1698 aa29.47■■■□□ 2.31
COPE-211ENST00000600932 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
COPE-211ENST00000600932 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
COPE-211ENST00000600932 IGF1RP08069 1367 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms