RNA–Protein interactions for RNA: ENST00000452955.1

IMP4-205, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-205ENST00000452955 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
IMP4-205ENST00000452955 ABCC9O60706 1549 aa26.56■■□□□ 1.84
IMP4-205ENST00000452955 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.81
IMP4-205ENST00000452955 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
IMP4-205ENST00000452955 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
IMP4-205ENST00000452955 NACADO15069 1562 aa24.99■■□□□ 1.59
IMP4-205ENST00000452955 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
IMP4-205ENST00000452955 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
IMP4-205ENST00000452955 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
IMP4-205ENST00000452955 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
IMP4-205ENST00000452955 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
IMP4-205ENST00000452955 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
IMP4-205ENST00000452955 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
IMP4-205ENST00000452955 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
IMP4-205ENST00000452955 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
IMP4-205ENST00000452955 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
IMP4-205ENST00000452955 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
IMP4-205ENST00000452955 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
IMP4-205ENST00000452955 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
IMP4-205ENST00000452955 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
IMP4-205ENST00000452955 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
IMP4-205ENST00000452955 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
IMP4-205ENST00000452955 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
IMP4-205ENST00000452955 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
IMP4-205ENST00000452955 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
IMP4-205ENST00000452955 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
IMP4-205ENST00000452955 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
IMP4-205ENST00000452955 NESP48681 1621 aa22.81■■□□□ 1.24
IMP4-205ENST00000452955 DNAJC5Q9H3Z4 198 aa22.75■■□□□ 1.23
IMP4-205ENST00000452955 CUX2O14529 1486 aa22.7■■□□□ 1.22
IMP4-205ENST00000452955 PEG3Q9GZU2 1588 aa22.68■■□□□ 1.22
IMP4-205ENST00000452955 WIZO95785 1651 aa22.58■■□□□ 1.21
IMP4-205ENST00000452955 LAMC3Q9Y6N6 1575 aa22.54■■□□□ 1.2
IMP4-205ENST00000452955 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
IMP4-205ENST00000452955 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
IMP4-205ENST00000452955 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
IMP4-205ENST00000452955 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
IMP4-205ENST00000452955 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
IMP4-205ENST00000452955 MRC2Q9UBG0 1479 aa22.26■■□□□ 1.15
IMP4-205ENST00000452955 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
IMP4-205ENST00000452955 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
IMP4-205ENST00000452955 FANCD2Q9BXW9 1451 aa22.2■■□□□ 1.14
IMP4-205ENST00000452955 CFTRP13569 1480 aa22.15■■□□□ 1.14
IMP4-205ENST00000452955 WDR62O43379 1518 aa22.12■■□□□ 1.13
IMP4-205ENST00000452955 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
IMP4-205ENST00000452955 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
IMP4-205ENST00000452955 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
IMP4-205ENST00000452955 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
IMP4-205ENST00000452955 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
IMP4-205ENST00000452955 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
IMP4-205ENST00000452955 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
IMP4-205ENST00000452955 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
IMP4-205ENST00000452955 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
IMP4-205ENST00000452955 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
IMP4-205ENST00000452955 FBLN2P98095 1184 aa21.67■■□□□ 1.06
IMP4-205ENST00000452955 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
IMP4-205ENST00000452955 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■■■■ 35.2
IMP4-205ENST00000452955 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
IMP4-205ENST00000452955 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
IMP4-205ENST00000452955 SOGA1O94964 1423 aa21.55■■□□□ 1.04
IMP4-205ENST00000452955 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
IMP4-205ENST00000452955 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
IMP4-205ENST00000452955 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
IMP4-205ENST00000452955 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
IMP4-205ENST00000452955 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
IMP4-205ENST00000452955 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
IMP4-205ENST00000452955 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
IMP4-205ENST00000452955 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
IMP4-205ENST00000452955 CHD1O14646 1710 aa21.44■■□□□ 1.02
IMP4-205ENST00000452955 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
IMP4-205ENST00000452955 CUX1P39880 1505 aa21.41■■□□□ 1.02
IMP4-205ENST00000452955 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
IMP4-205ENST00000452955 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
IMP4-205ENST00000452955 GRIN2BQ13224 1484 aa21.28■■□□□ 1
IMP4-205ENST00000452955 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
IMP4-205ENST00000452955 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
IMP4-205ENST00000452955 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
IMP4-205ENST00000452955 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
IMP4-205ENST00000452955 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
IMP4-205ENST00000452955 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
IMP4-205ENST00000452955 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
IMP4-205ENST00000452955 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
IMP4-205ENST00000452955 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
IMP4-205ENST00000452955 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
IMP4-205ENST00000452955 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
IMP4-205ENST00000452955 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
IMP4-205ENST00000452955 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
IMP4-205ENST00000452955 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
IMP4-205ENST00000452955 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
IMP4-205ENST00000452955 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
IMP4-205ENST00000452955 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
IMP4-205ENST00000452955 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
IMP4-205ENST00000452955 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
IMP4-205ENST00000452955 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
IMP4-205ENST00000452955 NUP160Q12769 1436 aa20.86■□□□□ 0.93
IMP4-205ENST00000452955 JPH4Q96JJ6 628 aa20.85■□□□□ 0.93
IMP4-205ENST00000452955 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
IMP4-205ENST00000452955 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
IMP4-205ENST00000452955 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
IMP4-205ENST00000452955 IGF1RP08069 1367 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms