RNA–Protein interactions for RNA: ENST00000571129.5

GABARAP-203, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2 BASIC

Gene GABARAP, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-203ENST00000571129 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
GABARAP-203ENST00000571129 CCDC180Q9P1Z9 1646 aa25.32■■□□□ 1.64
GABARAP-203ENST00000571129 ABCC9O60706 1549 aa24.61■■□□□ 1.53
GABARAP-203ENST00000571129 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
GABARAP-203ENST00000571129 NACADO15069 1562 aa23.81■■□□□ 1.4
GABARAP-203ENST00000571129 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
GABARAP-203ENST00000571129 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
GABARAP-203ENST00000571129 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
GABARAP-203ENST00000571129 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.38
GABARAP-203ENST00000571129 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
GABARAP-203ENST00000571129 UNC13AQ9UPW8 1703 aa23.07■■□□□ 1.28
GABARAP-203ENST00000571129 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
GABARAP-203ENST00000571129 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
GABARAP-203ENST00000571129 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
GABARAP-203ENST00000571129 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
GABARAP-203ENST00000571129 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
GABARAP-203ENST00000571129 DNAJC5BQ9UF47 199 aa22.41■■□□□ 1.18
GABARAP-203ENST00000571129 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
GABARAP-203ENST00000571129 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
GABARAP-203ENST00000571129 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
GABARAP-203ENST00000571129 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
GABARAP-203ENST00000571129 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
GABARAP-203ENST00000571129 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
GABARAP-203ENST00000571129 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
GABARAP-203ENST00000571129 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
GABARAP-203ENST00000571129 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
GABARAP-203ENST00000571129 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.1
GABARAP-203ENST00000571129 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
GABARAP-203ENST00000571129 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
GABARAP-203ENST00000571129 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
GABARAP-203ENST00000571129 WIZO95785 1651 aa21.71■■□□□ 1.07
GABARAP-203ENST00000571129 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
GABARAP-203ENST00000571129 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
GABARAP-203ENST00000571129 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
GABARAP-203ENST00000571129 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
GABARAP-203ENST00000571129 NESP48681 1621 aa21.32■■□□□ 1
GABARAP-203ENST00000571129 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
GABARAP-203ENST00000571129 CFTRP13569 1480 aa21.25■□□□□ 0.99
GABARAP-203ENST00000571129 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
GABARAP-203ENST00000571129 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
GABARAP-203ENST00000571129 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
GABARAP-203ENST00000571129 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
GABARAP-203ENST00000571129 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
GABARAP-203ENST00000571129 CUX2O14529 1486 aa20.99■□□□□ 0.95
GABARAP-203ENST00000571129 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
GABARAP-203ENST00000571129 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
GABARAP-203ENST00000571129 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
GABARAP-203ENST00000571129 PRDM2Q13029 1718 aa20.96■□□□□ 0.95
GABARAP-203ENST00000571129 WDR62O43379 1518 aa20.9■□□□□ 0.94
GABARAP-203ENST00000571129 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.93
GABARAP-203ENST00000571129 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
GABARAP-203ENST00000571129 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
GABARAP-203ENST00000571129 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
GABARAP-203ENST00000571129 CUX1P39880 1505 aa20.63■□□□□ 0.89
GABARAP-203ENST00000571129 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
GABARAP-203ENST00000571129 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
GABARAP-203ENST00000571129 POLA1P09884 1462 aaPredicted RBP20.58■□□□□ 0.89
GABARAP-203ENST00000571129 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
GABARAP-203ENST00000571129 SOGA1O94964 1423 aa20.51■□□□□ 0.87
GABARAP-203ENST00000571129 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
GABARAP-203ENST00000571129 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
GABARAP-203ENST00000571129 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
GABARAP-203ENST00000571129 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
GABARAP-203ENST00000571129 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
GABARAP-203ENST00000571129 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
GABARAP-203ENST00000571129 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
GABARAP-203ENST00000571129 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
GABARAP-203ENST00000571129 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
GABARAP-203ENST00000571129 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
GABARAP-203ENST00000571129 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
GABARAP-203ENST00000571129 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
GABARAP-203ENST00000571129 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
GABARAP-203ENST00000571129 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
GABARAP-203ENST00000571129 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
GABARAP-203ENST00000571129 SNAPC4Q5SXM2 1469 aa20.19■□□□□ 0.82
GABARAP-203ENST00000571129 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
GABARAP-203ENST00000571129 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
GABARAP-203ENST00000571129 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
GABARAP-203ENST00000571129 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
GABARAP-203ENST00000571129 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
GABARAP-203ENST00000571129 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
GABARAP-203ENST00000571129 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
GABARAP-203ENST00000571129 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
GABARAP-203ENST00000571129 FBLN2P98095 1184 aa20.07■□□□□ 0.8
GABARAP-203ENST00000571129 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
GABARAP-203ENST00000571129 IGF1RP08069 1367 aa20.05■□□□□ 0.8
GABARAP-203ENST00000571129 CHD1O14646 1710 aa20.01■□□□□ 0.79
GABARAP-203ENST00000571129 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
GABARAP-203ENST00000571129 CUL7Q14999 1698 aa19.97■□□□□ 0.79
GABARAP-203ENST00000571129 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
GABARAP-203ENST00000571129 PHF23Q9BUL5 403 aaPredicted RBP19.94■□□□□ 0.78
GABARAP-203ENST00000571129 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
GABARAP-203ENST00000571129 NUP160Q12769 1436 aa19.92■□□□□ 0.78
GABARAP-203ENST00000571129 EEA1Q15075 1411 aa19.92■□□□□ 0.78
GABARAP-203ENST00000571129 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
GABARAP-203ENST00000571129 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
GABARAP-203ENST00000571129 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
GABARAP-203ENST00000571129 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
GABARAP-203ENST00000571129 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
GABARAP-203ENST00000571129 ARHGEF11O15085 1522 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms