RNA–Protein interactions for RNA: ENST00000348943.7

HNRNPM-202, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPM, Length 2,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-202ENST00000348943 NISCHQ9Y2I1 1504 aa47.19■■■■■ 5.14
HNRNPM-202ENST00000348943 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.06
HNRNPM-202ENST00000348943 SHROOM4Q9ULL8 1493 aa39.78■■■■□ 3.96
HNRNPM-202ENST00000348943 ZCCHC6Q5VYS8 1495 aaKnown RBP39.75■■■■□ 3.95
HNRNPM-202ENST00000348943 DCAF8L2P0C7V8 631 aa39.47■■■■□ 3.91
HNRNPM-202ENST00000348943 SUPT5HO00267 1087 aaKnown RBP38.7■■■■□ 3.79
HNRNPM-202ENST00000348943 DCAF1Q9Y4B6 1507 aa38.69■■■■□ 3.78
HNRNPM-202ENST00000348943 ABCC9O60706 1549 aa38.12■■■■□ 3.69
HNRNPM-202ENST00000348943 MYO15BQ96JP2 1530 aa37.84■■■■□ 3.65
HNRNPM-202ENST00000348943 SCRIBQ14160 1630 aa37.82■■■■□ 3.64
HNRNPM-202ENST00000348943 NACADO15069 1562 aa37.58■■■■□ 3.61
HNRNPM-202ENST00000348943 CHIC1Q5VXU3 224 aa37.23■■■■□ 3.55
HNRNPM-202ENST00000348943 RB1CC1Q8TDY2 1594 aa37.13■■■■□ 3.53
HNRNPM-202ENST00000348943 RSF1Q96T23 1441 aaPredicted RBP37.07■■■■□ 3.53
HNRNPM-202ENST00000348943 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
HNRNPM-202ENST00000348943 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
HNRNPM-202ENST00000348943 UNC13AQ9UPW8 1703 aa36.52■■■■□ 3.44
HNRNPM-202ENST00000348943 WIZO95785 1651 aa36.42■■■■□ 3.42
HNRNPM-202ENST00000348943 PABPN1Q86U42 306 aaKnown RBP eCLIP36.34■■■■□ 3.41
HNRNPM-202ENST00000348943 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
HNRNPM-202ENST00000348943 LOC105371045A0A1W2PR82 267 aa36.13■■■■□ 3.37
HNRNPM-202ENST00000348943 TRIM41Q8WV44 630 aa36.11■■■■□ 3.37
HNRNPM-202ENST00000348943 BICRAQ9NZM4 1560 aa36.1■■■■□ 3.37
HNRNPM-202ENST00000348943 SMARCA4P51532 1647 aa36.08■■■■□ 3.37
HNRNPM-202ENST00000348943 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
HNRNPM-202ENST00000348943 FAM9AQ8IZU1 332 aaPredicted RBP35.79■■■■□ 3.32
HNRNPM-202ENST00000348943 CCDC88BA6NC98 1476 aa35.69■■■■□ 3.3
HNRNPM-202ENST00000348943 SMARCA2P51531 1590 aa35.61■■■■□ 3.29
HNRNPM-202ENST00000348943 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
HNRNPM-202ENST00000348943 EHMT2Q96KQ7 1210 aa35.54■■■■□ 3.28
HNRNPM-202ENST00000348943 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
HNRNPM-202ENST00000348943 PCGF6Q9BYE7 350 aa35.39■■■■□ 3.26
HNRNPM-202ENST00000348943 ABCC8Q09428 1581 aa35.37■■■■□ 3.25
HNRNPM-202ENST00000348943 ATAD2BQ9ULI0 1458 aa35.34■■■■□ 3.25
HNRNPM-202ENST00000348943 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
HNRNPM-202ENST00000348943 SOGA1O94964 1423 aa34.9■■■■□ 3.18
HNRNPM-202ENST00000348943 WRNQ14191 1432 aaPredicted RBP eCLIP34.87■■■■□ 3.17
HNRNPM-202ENST00000348943 TRIM26Q12899 539 aaPredicted RBP34.86■■■■□ 3.17
HNRNPM-202ENST00000348943 HRCP23327 699 aa34.82■■■■□ 3.17
HNRNPM-202ENST00000348943 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
HNRNPM-202ENST00000348943 RUSC2Q8N2Y8 1516 aa34.76■■■■□ 3.15
HNRNPM-202ENST00000348943 HMGXB3Q12766 1538 aa34.7■■■■□ 3.14
HNRNPM-202ENST00000348943 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
HNRNPM-202ENST00000348943 CSRNP3Q8WYN3 585 aa34.68■■■■□ 3.14
HNRNPM-202ENST00000348943 EEA1Q15075 1411 aa34.58■■■■□ 3.13
HNRNPM-202ENST00000348943 PPARGC1BQ86YN6 1023 aaKnown RBP34.58■■■■□ 3.13
HNRNPM-202ENST00000348943 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
HNRNPM-202ENST00000348943 CEP162Q5TB80 1403 aa34.4■■■■□ 3.1
HNRNPM-202ENST00000348943 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
HNRNPM-202ENST00000348943 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
HNRNPM-202ENST00000348943 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
HNRNPM-202ENST00000348943 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
HNRNPM-202ENST00000348943 CFTRP13569 1480 aa34.3■■■■□ 3.08
HNRNPM-202ENST00000348943 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
HNRNPM-202ENST00000348943 BIVM-ERCC5R4GMW8 1640 aa34.2■■■■□ 3.07
HNRNPM-202ENST00000348943 TTBK1Q5TCY1 1321 aaPredicted RBP34.19■■■■□ 3.06
HNRNPM-202ENST00000348943 CUX1P39880 1505 aa34.17■■■■□ 3.06
HNRNPM-202ENST00000348943 KIF21BO75037 1637 aa34.12■■■■□ 3.05
HNRNPM-202ENST00000348943 CADPSQ9ULU8 1353 aa34.09■■■■□ 3.05
HNRNPM-202ENST00000348943 RAPGEF2Q9Y4G8 1499 aa34.08■■■■□ 3.05
HNRNPM-202ENST00000348943 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
HNRNPM-202ENST00000348943 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
HNRNPM-202ENST00000348943 CLIP1P30622 1438 aa33.93■■■■□ 3.02
HNRNPM-202ENST00000348943 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
HNRNPM-202ENST00000348943 PRXQ9BXM0 1461 aa33.8■■■■□ 3
HNRNPM-202ENST00000348943 FANCD2Q9BXW9 1451 aa33.75■■■□□ 2.99
HNRNPM-202ENST00000348943 ZEB1P37275 1124 aaPredicted RBP33.74■■■□□ 2.99
HNRNPM-202ENST00000348943 NESP48681 1621 aa33.74■■■□□ 2.99
HNRNPM-202ENST00000348943 ERICH3Q5RHP9 1530 aa33.71■■■□□ 2.99
HNRNPM-202ENST00000348943 CUX2O14529 1486 aa33.7■■■□□ 2.99
HNRNPM-202ENST00000348943 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
HNRNPM-202ENST00000348943 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
HNRNPM-202ENST00000348943 VPS8Q8N3P4 1428 aa33.66■■■□□ 2.98
HNRNPM-202ENST00000348943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.66■■■□□ 2.98
HNRNPM-202ENST00000348943 APLP2Q06481 763 aa33.6■■■□□ 2.97
HNRNPM-202ENST00000348943 IGF1RP08069 1367 aa33.56■■■□□ 2.96
HNRNPM-202ENST00000348943 CCER1Q8TC90 406 aaPredicted RBP33.53■■■□□ 2.96
HNRNPM-202ENST00000348943 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
HNRNPM-202ENST00000348943 DNMBPQ6XZF7 1577 aa33.45■■■□□ 2.94
HNRNPM-202ENST00000348943 TOPBP1Q92547 1522 aa33.44■■■□□ 2.94
HNRNPM-202ENST00000348943 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
HNRNPM-202ENST00000348943 CARMIL1Q5VZK9 1371 aa33.42■■■□□ 2.94
HNRNPM-202ENST00000348943 LAMC3Q9Y6N6 1575 aa33.4■■■□□ 2.94
HNRNPM-202ENST00000348943 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
HNRNPM-202ENST00000348943 HNRNPUL2Q1KMD3 747 aaKnown RBP33.31■■■□□ 2.92
HNRNPM-202ENST00000348943 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
HNRNPM-202ENST00000348943 ARHGAP35Q9NRY4 1499 aa33.28■■■□□ 2.92
HNRNPM-202ENST00000348943 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.91
HNRNPM-202ENST00000348943 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
HNRNPM-202ENST00000348943 KANK4Q5T7N3 995 aaPredicted RBP33.21■■■□□ 2.91
HNRNPM-202ENST00000348943 KIF21AQ7Z4S6 1674 aa33.13■■■□□ 2.89
HNRNPM-202ENST00000348943 TDRD9Q8NDG6 1382 aaKnown RBP33.12■■■□□ 2.89
HNRNPM-202ENST00000348943 P3H3Q8IVL6 736 aa33.1■■■□□ 2.89
HNRNPM-202ENST00000348943 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
HNRNPM-202ENST00000348943 CUL7Q14999 1698 aa32.95■■■□□ 2.87
HNRNPM-202ENST00000348943 GAPVD1Q14C86 1478 aa32.94■■■□□ 2.86
HNRNPM-202ENST00000348943 ATP1B4Q9UN42 357 aaPredicted RBP32.93■■■□□ 2.86
HNRNPM-202ENST00000348943 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
HNRNPM-202ENST00000348943 FHOD3Q2V2M9 1422 aa32.85■■■□□ 2.85
HNRNPM-202ENST00000348943 FHAD1B1AJZ9 1412 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms