RNA–Protein interactions for RNA: ENST00000588301.5

SNRPD2-206, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNRPD2, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-206ENST00000588301 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
SNRPD2-206ENST00000588301 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
SNRPD2-206ENST00000588301 ABCC9O60706 1549 aa30.4■■■□□ 2.46
SNRPD2-206ENST00000588301 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
SNRPD2-206ENST00000588301 RB1CC1Q8TDY2 1594 aa29.14■■■□□ 2.26
SNRPD2-206ENST00000588301 NACADO15069 1562 aa29.09■■■□□ 2.25
SNRPD2-206ENST00000588301 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
SNRPD2-206ENST00000588301 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
SNRPD2-206ENST00000588301 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
SNRPD2-206ENST00000588301 UNC13AQ9UPW8 1703 aa28.62■■■□□ 2.17
SNRPD2-206ENST00000588301 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
SNRPD2-206ENST00000588301 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
SNRPD2-206ENST00000588301 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
SNRPD2-206ENST00000588301 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
SNRPD2-206ENST00000588301 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
SNRPD2-206ENST00000588301 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
SNRPD2-206ENST00000588301 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
SNRPD2-206ENST00000588301 CECR2Q9BXF3 1484 aa27.28■■□□□ 1.96
SNRPD2-206ENST00000588301 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
SNRPD2-206ENST00000588301 BAZ1AQ9NRL2 1556 aaPredicted RBP27.02■■□□□ 1.92
SNRPD2-206ENST00000588301 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
SNRPD2-206ENST00000588301 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
SNRPD2-206ENST00000588301 NCAPD3P42695 1498 aa26.85■■□□□ 1.89
SNRPD2-206ENST00000588301 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
SNRPD2-206ENST00000588301 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
SNRPD2-206ENST00000588301 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SNRPD2-206ENST00000588301 WIZO95785 1651 aa26.72■■□□□ 1.87
SNRPD2-206ENST00000588301 BAZ1BQ9UIG0 1483 aaKnown RBP26.71■■□□□ 1.87
SNRPD2-206ENST00000588301 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
SNRPD2-206ENST00000588301 NESP48681 1621 aa26.35■■□□□ 1.81
SNRPD2-206ENST00000588301 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
SNRPD2-206ENST00000588301 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
SNRPD2-206ENST00000588301 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
SNRPD2-206ENST00000588301 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
SNRPD2-206ENST00000588301 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
SNRPD2-206ENST00000588301 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
SNRPD2-206ENST00000588301 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
SNRPD2-206ENST00000588301 CFTRP13569 1480 aa25.95■■□□□ 1.74
SNRPD2-206ENST00000588301 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
SNRPD2-206ENST00000588301 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
SNRPD2-206ENST00000588301 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
SNRPD2-206ENST00000588301 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
SNRPD2-206ENST00000588301 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
SNRPD2-206ENST00000588301 CUX2O14529 1486 aa25.77■■□□□ 1.72
SNRPD2-206ENST00000588301 MRC2Q9UBG0 1479 aa25.73■■□□□ 1.71
SNRPD2-206ENST00000588301 WDR62O43379 1518 aa25.65■■□□□ 1.7
SNRPD2-206ENST00000588301 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
SNRPD2-206ENST00000588301 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
SNRPD2-206ENST00000588301 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.65
SNRPD2-206ENST00000588301 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
SNRPD2-206ENST00000588301 CUX1P39880 1505 aa25.3■■□□□ 1.64
SNRPD2-206ENST00000588301 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
SNRPD2-206ENST00000588301 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SNRPD2-206ENST00000588301 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
SNRPD2-206ENST00000588301 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
SNRPD2-206ENST00000588301 RAD54L2Q9Y4B4 1467 aa25.17■■□□□ 1.62
SNRPD2-206ENST00000588301 TARBP1Q13395 1621 aaKnown RBP25.17■■□□□ 1.62
SNRPD2-206ENST00000588301 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
SNRPD2-206ENST00000588301 SOGA1O94964 1423 aa25.1■■□□□ 1.61
SNRPD2-206ENST00000588301 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
SNRPD2-206ENST00000588301 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
SNRPD2-206ENST00000588301 BIVM-ERCC5R4GMW8 1640 aa25.05■■□□□ 1.6
SNRPD2-206ENST00000588301 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.6
SNRPD2-206ENST00000588301 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SNRPD2-206ENST00000588301 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
SNRPD2-206ENST00000588301 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SNRPD2-206ENST00000588301 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
SNRPD2-206ENST00000588301 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.57
SNRPD2-206ENST00000588301 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
SNRPD2-206ENST00000588301 PBRM1Q86U86 1689 aa24.82■■□□□ 1.56
SNRPD2-206ENST00000588301 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
SNRPD2-206ENST00000588301 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
SNRPD2-206ENST00000588301 CHD1O14646 1710 aa24.8■■□□□ 1.56
SNRPD2-206ENST00000588301 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
SNRPD2-206ENST00000588301 FBLN2P98095 1184 aa24.74■■□□□ 1.55
SNRPD2-206ENST00000588301 OSCARQ8IYS5 282 aa24.73■■□□□ 1.55
SNRPD2-206ENST00000588301 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
SNRPD2-206ENST00000588301 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
SNRPD2-206ENST00000588301 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
SNRPD2-206ENST00000588301 ADAMTS12P58397 1594 aa24.6■■□□□ 1.53
SNRPD2-206ENST00000588301 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
SNRPD2-206ENST00000588301 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
SNRPD2-206ENST00000588301 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
SNRPD2-206ENST00000588301 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
SNRPD2-206ENST00000588301 GRIN2AQ12879 1464 aa24.48■■□□□ 1.51
SNRPD2-206ENST00000588301 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
SNRPD2-206ENST00000588301 CLASP1Q7Z460 1538 aa24.46■■□□□ 1.51
SNRPD2-206ENST00000588301 IGF1RP08069 1367 aa24.46■■□□□ 1.51
SNRPD2-206ENST00000588301 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
SNRPD2-206ENST00000588301 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
SNRPD2-206ENST00000588301 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
SNRPD2-206ENST00000588301 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
SNRPD2-206ENST00000588301 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
SNRPD2-206ENST00000588301 CUL7Q14999 1698 aa24.38■■□□□ 1.49
SNRPD2-206ENST00000588301 NUP160Q12769 1436 aa24.35■■□□□ 1.49
SNRPD2-206ENST00000588301 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
SNRPD2-206ENST00000588301 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
SNRPD2-206ENST00000588301 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
SNRPD2-206ENST00000588301 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
SNRPD2-206ENST00000588301 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms