RNA–Protein interactions for RNA: ENST00000570856.1

GABARAP-202, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2

Gene GABARAP, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-202ENST00000570856 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
GABARAP-202ENST00000570856 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
GABARAP-202ENST00000570856 ABCC9O60706 1549 aa26.68■■□□□ 1.86
GABARAP-202ENST00000570856 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
GABARAP-202ENST00000570856 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
GABARAP-202ENST00000570856 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
GABARAP-202ENST00000570856 NACADO15069 1562 aa26.2■■□□□ 1.78
GABARAP-202ENST00000570856 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
GABARAP-202ENST00000570856 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
GABARAP-202ENST00000570856 SCRIBQ14160 1630 aa25.53■■□□□ 1.68
GABARAP-202ENST00000570856 UNC13AQ9UPW8 1703 aa25.53■■□□□ 1.68
GABARAP-202ENST00000570856 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
GABARAP-202ENST00000570856 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
GABARAP-202ENST00000570856 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
GABARAP-202ENST00000570856 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
GABARAP-202ENST00000570856 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
GABARAP-202ENST00000570856 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
GABARAP-202ENST00000570856 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
GABARAP-202ENST00000570856 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
GABARAP-202ENST00000570856 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
GABARAP-202ENST00000570856 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
GABARAP-202ENST00000570856 WIZO95785 1651 aa24.28■■□□□ 1.48
GABARAP-202ENST00000570856 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
GABARAP-202ENST00000570856 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
GABARAP-202ENST00000570856 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
GABARAP-202ENST00000570856 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
GABARAP-202ENST00000570856 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
GABARAP-202ENST00000570856 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
GABARAP-202ENST00000570856 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
GABARAP-202ENST00000570856 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
GABARAP-202ENST00000570856 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
GABARAP-202ENST00000570856 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
GABARAP-202ENST00000570856 CFTRP13569 1480 aa23.48■■□□□ 1.35
GABARAP-202ENST00000570856 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
GABARAP-202ENST00000570856 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
GABARAP-202ENST00000570856 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
GABARAP-202ENST00000570856 NESP48681 1621 aa23.3■■□□□ 1.32
GABARAP-202ENST00000570856 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
GABARAP-202ENST00000570856 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
GABARAP-202ENST00000570856 KIF21AQ7Z4S6 1674 aa23.11■■□□□ 1.29
GABARAP-202ENST00000570856 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
GABARAP-202ENST00000570856 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
GABARAP-202ENST00000570856 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
GABARAP-202ENST00000570856 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
GABARAP-202ENST00000570856 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
GABARAP-202ENST00000570856 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
GABARAP-202ENST00000570856 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
GABARAP-202ENST00000570856 CUX1P39880 1505 aa22.96■■□□□ 1.27
GABARAP-202ENST00000570856 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
GABARAP-202ENST00000570856 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
GABARAP-202ENST00000570856 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
GABARAP-202ENST00000570856 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
GABARAP-202ENST00000570856 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
GABARAP-202ENST00000570856 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
GABARAP-202ENST00000570856 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
GABARAP-202ENST00000570856 WDR62O43379 1518 aa22.85■■□□□ 1.25
GABARAP-202ENST00000570856 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
GABARAP-202ENST00000570856 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
GABARAP-202ENST00000570856 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
GABARAP-202ENST00000570856 CUX2O14529 1486 aa22.66■■□□□ 1.22
GABARAP-202ENST00000570856 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
GABARAP-202ENST00000570856 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
GABARAP-202ENST00000570856 SOGA1O94964 1423 aa22.62■■□□□ 1.21
GABARAP-202ENST00000570856 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
GABARAP-202ENST00000570856 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
GABARAP-202ENST00000570856 IFT140Q96RY7 1462 aa22.58■■□□□ 1.2
GABARAP-202ENST00000570856 EEA1Q15075 1411 aa22.54■■□□□ 1.2
GABARAP-202ENST00000570856 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
GABARAP-202ENST00000570856 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
GABARAP-202ENST00000570856 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
GABARAP-202ENST00000570856 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
GABARAP-202ENST00000570856 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
GABARAP-202ENST00000570856 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
GABARAP-202ENST00000570856 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
GABARAP-202ENST00000570856 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
GABARAP-202ENST00000570856 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
GABARAP-202ENST00000570856 IGF1RP08069 1367 aa22.35■■□□□ 1.17
GABARAP-202ENST00000570856 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
GABARAP-202ENST00000570856 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.175e-6■□□□□ 10
GABARAP-202ENST00000570856 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
GABARAP-202ENST00000570856 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
GABARAP-202ENST00000570856 CUL7Q14999 1698 aa22.29■■□□□ 1.16
GABARAP-202ENST00000570856 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
GABARAP-202ENST00000570856 KIF21BO75037 1637 aa22.28■■□□□ 1.16
GABARAP-202ENST00000570856 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
GABARAP-202ENST00000570856 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
GABARAP-202ENST00000570856 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
GABARAP-202ENST00000570856 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
GABARAP-202ENST00000570856 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
GABARAP-202ENST00000570856 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
GABARAP-202ENST00000570856 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
GABARAP-202ENST00000570856 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
GABARAP-202ENST00000570856 LOC105371045A0A1W2PR82 267 aa22.05■■□□□ 1.12
GABARAP-202ENST00000570856 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
GABARAP-202ENST00000570856 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
GABARAP-202ENST00000570856 CHD1O14646 1710 aa21.98■■□□□ 1.11
GABARAP-202ENST00000570856 CTTNBP2Q8WZ74 1663 aa21.96■■□□□ 1.11
GABARAP-202ENST00000570856 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
GABARAP-202ENST00000570856 NUP160Q12769 1436 aa21.93■■□□□ 1.1
GABARAP-202ENST00000570856 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms