RNA–Protein interactions for RNA: ENST00000253413.9

ATP6V1E1-201, Transcript of ATPase H+ transporting V1 subunit E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1E1, Length 1,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1E1-201ENST00000253413 NISCHQ9Y2I1 1504 aa40.09■■■■■ 4.01
ATP6V1E1-201ENST00000253413 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
ATP6V1E1-201ENST00000253413 ABCC9O60706 1549 aa34.61■■■■□ 3.13
ATP6V1E1-201ENST00000253413 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
ATP6V1E1-201ENST00000253413 NACADO15069 1562 aa33.4■■■□□ 2.94
ATP6V1E1-201ENST00000253413 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
ATP6V1E1-201ENST00000253413 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
ATP6V1E1-201ENST00000253413 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
ATP6V1E1-201ENST00000253413 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
ATP6V1E1-201ENST00000253413 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
ATP6V1E1-201ENST00000253413 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
ATP6V1E1-201ENST00000253413 BICRAQ9NZM4 1560 aa32.35■■■□□ 2.77
ATP6V1E1-201ENST00000253413 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
ATP6V1E1-201ENST00000253413 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
ATP6V1E1-201ENST00000253413 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
ATP6V1E1-201ENST00000253413 EIF4G1Q04637 1599 aaKnown RBP31.49■■■□□ 2.63
ATP6V1E1-201ENST00000253413 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
ATP6V1E1-201ENST00000253413 CECR2Q9BXF3 1484 aa31.19■■■□□ 2.58
ATP6V1E1-201ENST00000253413 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
ATP6V1E1-201ENST00000253413 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
ATP6V1E1-201ENST00000253413 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
ATP6V1E1-201ENST00000253413 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
ATP6V1E1-201ENST00000253413 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
ATP6V1E1-201ENST00000253413 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
ATP6V1E1-201ENST00000253413 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
ATP6V1E1-201ENST00000253413 HMGXB3Q12766 1538 aa30.69■■■□□ 2.5
ATP6V1E1-201ENST00000253413 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
ATP6V1E1-201ENST00000253413 RSF1Q96T23 1441 aaPredicted RBP30.61■■■□□ 2.49
ATP6V1E1-201ENST00000253413 WIZO95785 1651 aa30.53■■■□□ 2.48
ATP6V1E1-201ENST00000253413 TOP2AP11388 1531 aaKnown RBP30.28■■■□□ 2.44
ATP6V1E1-201ENST00000253413 NESP48681 1621 aa29.99■■■□□ 2.39
ATP6V1E1-201ENST00000253413 LAMC3Q9Y6N6 1575 aa29.96■■■□□ 2.39
ATP6V1E1-201ENST00000253413 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.38
ATP6V1E1-201ENST00000253413 CADPSQ9ULU8 1353 aa29.93■■■□□ 2.38
ATP6V1E1-201ENST00000253413 CCDC88BA6NC98 1476 aa29.9■■■□□ 2.38
ATP6V1E1-201ENST00000253413 ERCC6Q03468 1493 aa29.84■■■□□ 2.37
ATP6V1E1-201ENST00000253413 CFTRP13569 1480 aa29.79■■■□□ 2.36
ATP6V1E1-201ENST00000253413 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
ATP6V1E1-201ENST00000253413 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
ATP6V1E1-201ENST00000253413 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
ATP6V1E1-201ENST00000253413 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
ATP6V1E1-201ENST00000253413 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
ATP6V1E1-201ENST00000253413 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
ATP6V1E1-201ENST00000253413 CUX2O14529 1486 aa29.47■■■□□ 2.31
ATP6V1E1-201ENST00000253413 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
ATP6V1E1-201ENST00000253413 WDR62O43379 1518 aa29.35■■■□□ 2.29
ATP6V1E1-201ENST00000253413 URB2Q14146 1524 aaKnown RBP29.27■■■□□ 2.28
ATP6V1E1-201ENST00000253413 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
ATP6V1E1-201ENST00000253413 TOPBP1Q92547 1522 aa29.13■■■□□ 2.25
ATP6V1E1-201ENST00000253413 DNMBPQ6XZF7 1577 aa29.12■■■□□ 2.25
ATP6V1E1-201ENST00000253413 CUX1P39880 1505 aa28.97■■■□□ 2.23
ATP6V1E1-201ENST00000253413 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
ATP6V1E1-201ENST00000253413 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
ATP6V1E1-201ENST00000253413 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
ATP6V1E1-201ENST00000253413 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
ATP6V1E1-201ENST00000253413 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
ATP6V1E1-201ENST00000253413 SOGA1O94964 1423 aa28.77■■■□□ 2.2
ATP6V1E1-201ENST00000253413 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
ATP6V1E1-201ENST00000253413 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
ATP6V1E1-201ENST00000253413 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
ATP6V1E1-201ENST00000253413 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
ATP6V1E1-201ENST00000253413 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
ATP6V1E1-201ENST00000253413 EIF4G3O43432 1585 aaKnown RBP28.65■■■□□ 2.18
ATP6V1E1-201ENST00000253413 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
ATP6V1E1-201ENST00000253413 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.172e-6■■□□□ 13.4
ATP6V1E1-201ENST00000253413 ABCA10Q8WWZ4 1543 aa28.6■■■□□ 2.17
ATP6V1E1-201ENST00000253413 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
ATP6V1E1-201ENST00000253413 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.15
ATP6V1E1-201ENST00000253413 ABCA5Q8WWZ7 1642 aa28.45■■■□□ 2.15
ATP6V1E1-201ENST00000253413 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
ATP6V1E1-201ENST00000253413 SNAPC4Q5SXM2 1469 aa28.37■■■□□ 2.13
ATP6V1E1-201ENST00000253413 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
ATP6V1E1-201ENST00000253413 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
ATP6V1E1-201ENST00000253413 DNAJC5Q9H3Z4 198 aa28.3■■■□□ 2.12
ATP6V1E1-201ENST00000253413 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
ATP6V1E1-201ENST00000253413 KIF27Q86VH2 1401 aa28.26■■■□□ 2.11
ATP6V1E1-201ENST00000253413 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
ATP6V1E1-201ENST00000253413 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
ATP6V1E1-201ENST00000253413 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
ATP6V1E1-201ENST00000253413 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
ATP6V1E1-201ENST00000253413 FBLN2P98095 1184 aa28.21■■■□□ 2.11
ATP6V1E1-201ENST00000253413 CHD1O14646 1710 aa28.2■■■□□ 2.1
ATP6V1E1-201ENST00000253413 CHMP7Q8WUX9 453 aaPredicted RBP28.18■■■□□ 2.1
ATP6V1E1-201ENST00000253413 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
ATP6V1E1-201ENST00000253413 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
ATP6V1E1-201ENST00000253413 IGF1RP08069 1367 aa28.09■■■□□ 2.09
ATP6V1E1-201ENST00000253413 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
ATP6V1E1-201ENST00000253413 CUL7Q14999 1698 aa28.03■■■□□ 2.08
ATP6V1E1-201ENST00000253413 RUSC2Q8N2Y8 1516 aa28.01■■■□□ 2.07
ATP6V1E1-201ENST00000253413 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
ATP6V1E1-201ENST00000253413 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
ATP6V1E1-201ENST00000253413 NUP160Q12769 1436 aa27.94■■■□□ 2.06
ATP6V1E1-201ENST00000253413 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
ATP6V1E1-201ENST00000253413 EEA1Q15075 1411 aa27.86■■■□□ 2.05
ATP6V1E1-201ENST00000253413 RAPGEF2Q9Y4G8 1499 aa27.81■■■□□ 2.04
ATP6V1E1-201ENST00000253413 ARHGEF11O15085 1522 aa27.81■■■□□ 2.04
ATP6V1E1-201ENST00000253413 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
ATP6V1E1-201ENST00000253413 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
ATP6V1E1-201ENST00000253413 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
ATP6V1E1-201ENST00000253413 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms