RNA–Protein interactions for RNA: ENST00000350356.7

PRKACA-202, Transcript of protein kinase cAMP-activated catalytic subunit alpha, humanhuman

TSL 2

Gene PRKACA, Length 3,105 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACA-202ENST00000350356 NISCHQ9Y2I1 1504 aa25.74■■□□□ 1.71
PRKACA-202ENST00000350356 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
PRKACA-202ENST00000350356 ABCC9O60706 1549 aa22.28■■□□□ 1.16
PRKACA-202ENST00000350356 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
PRKACA-202ENST00000350356 NACADO15069 1562 aa21.92■■□□□ 1.1
PRKACA-202ENST00000350356 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
PRKACA-202ENST00000350356 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
PRKACA-202ENST00000350356 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
PRKACA-202ENST00000350356 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
PRKACA-202ENST00000350356 UNC13AQ9UPW8 1703 aa21.45■■□□□ 1.02
PRKACA-202ENST00000350356 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
PRKACA-202ENST00000350356 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
PRKACA-202ENST00000350356 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.89
PRKACA-202ENST00000350356 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
PRKACA-202ENST00000350356 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
PRKACA-202ENST00000350356 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
PRKACA-202ENST00000350356 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
PRKACA-202ENST00000350356 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
PRKACA-202ENST00000350356 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
PRKACA-202ENST00000350356 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
PRKACA-202ENST00000350356 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
PRKACA-202ENST00000350356 SMARCA4P51532 1647 aa20.08■□□□□ 0.81
PRKACA-202ENST00000350356 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
PRKACA-202ENST00000350356 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
PRKACA-202ENST00000350356 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
PRKACA-202ENST00000350356 CUX2O14529 1486 aa19.71■□□□□ 0.75
PRKACA-202ENST00000350356 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
PRKACA-202ENST00000350356 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
PRKACA-202ENST00000350356 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
PRKACA-202ENST00000350356 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
PRKACA-202ENST00000350356 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.71
PRKACA-202ENST00000350356 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
PRKACA-202ENST00000350356 WIZO95785 1651 aa19.43■□□□□ 0.7
PRKACA-202ENST00000350356 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
PRKACA-202ENST00000350356 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
PRKACA-202ENST00000350356 WDR62O43379 1518 aa19.32■□□□□ 0.68
PRKACA-202ENST00000350356 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
PRKACA-202ENST00000350356 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
PRKACA-202ENST00000350356 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
PRKACA-202ENST00000350356 CFTRP13569 1480 aa19.26■□□□□ 0.67
PRKACA-202ENST00000350356 NESP48681 1621 aa19.24■□□□□ 0.67
PRKACA-202ENST00000350356 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
PRKACA-202ENST00000350356 CEP164Q9UPV0 1460 aa19.1■□□□□ 0.65
PRKACA-202ENST00000350356 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
PRKACA-202ENST00000350356 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
PRKACA-202ENST00000350356 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
PRKACA-202ENST00000350356 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
PRKACA-202ENST00000350356 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
PRKACA-202ENST00000350356 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
PRKACA-202ENST00000350356 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
PRKACA-202ENST00000350356 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
PRKACA-202ENST00000350356 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
PRKACA-202ENST00000350356 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
PRKACA-202ENST00000350356 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.58
PRKACA-202ENST00000350356 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
PRKACA-202ENST00000350356 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
PRKACA-202ENST00000350356 CUX1P39880 1505 aa18.51■□□□□ 0.55
PRKACA-202ENST00000350356 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
PRKACA-202ENST00000350356 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
PRKACA-202ENST00000350356 PBRM1Q86U86 1689 aa18.48■□□□□ 0.55
PRKACA-202ENST00000350356 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
PRKACA-202ENST00000350356 CHD1O14646 1710 aa18.46■□□□□ 0.55
PRKACA-202ENST00000350356 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
PRKACA-202ENST00000350356 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
PRKACA-202ENST00000350356 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
PRKACA-202ENST00000350356 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
PRKACA-202ENST00000350356 CLASP1Q7Z460 1538 aa18.41■□□□□ 0.54
PRKACA-202ENST00000350356 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
PRKACA-202ENST00000350356 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
PRKACA-202ENST00000350356 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
PRKACA-202ENST00000350356 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
PRKACA-202ENST00000350356 SOGA1O94964 1423 aa18.34■□□□□ 0.53
PRKACA-202ENST00000350356 SYNJ1O43426 1573 aa18.33■□□□□ 0.53
PRKACA-202ENST00000350356 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
PRKACA-202ENST00000350356 ERICH3Q5RHP9 1530 aa18.31■□□□□ 0.52
PRKACA-202ENST00000350356 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
PRKACA-202ENST00000350356 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
PRKACA-202ENST00000350356 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
PRKACA-202ENST00000350356 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
PRKACA-202ENST00000350356 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
PRKACA-202ENST00000350356 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
PRKACA-202ENST00000350356 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
PRKACA-202ENST00000350356 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
PRKACA-202ENST00000350356 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
PRKACA-202ENST00000350356 CUL7Q14999 1698 aa18.16■□□□□ 0.5
PRKACA-202ENST00000350356 NUP160Q12769 1436 aa18.14■□□□□ 0.49
PRKACA-202ENST00000350356 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
PRKACA-202ENST00000350356 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
PRKACA-202ENST00000350356 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
PRKACA-202ENST00000350356 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
PRKACA-202ENST00000350356 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
PRKACA-202ENST00000350356 RUSC2Q8N2Y8 1516 aa18.01■□□□□ 0.47
PRKACA-202ENST00000350356 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
PRKACA-202ENST00000350356 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
PRKACA-202ENST00000350356 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.44
PRKACA-202ENST00000350356 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
PRKACA-202ENST00000350356 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
PRKACA-202ENST00000350356 IGF1RP08069 1367 aa17.76■□□□□ 0.43
PRKACA-202ENST00000350356 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
PRKACA-202ENST00000350356 UGGT2Q9NYU1 1516 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms