RNA–Protein interactions for RNA: ENST00000615116.1

SCAND1-203, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAND1, Length 1,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-203ENST00000615116 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
SCAND1-203ENST00000615116 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
SCAND1-203ENST00000615116 ABCC9O60706 1549 aa37.22■■■■□ 3.55
SCAND1-203ENST00000615116 ZCCHC6Q5VYS8 1495 aaKnown RBP36.25■■■■□ 3.39
SCAND1-203ENST00000615116 DCAF8L2P0C7V8 631 aa35.9■■■■□ 3.34
SCAND1-203ENST00000615116 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
SCAND1-203ENST00000615116 MYO15BQ96JP2 1530 aa35.74■■■■□ 3.31
SCAND1-203ENST00000615116 NACADO15069 1562 aa35.7■■■■□ 3.31
SCAND1-203ENST00000615116 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.29
SCAND1-203ENST00000615116 SCRIBQ14160 1630 aa34.92■■■■□ 3.18
SCAND1-203ENST00000615116 UNC13AQ9UPW8 1703 aa34.8■■■■□ 3.16
SCAND1-203ENST00000615116 PABPN1Q86U42 306 aaKnown RBP eCLIP34.79■■■■□ 3.16
SCAND1-203ENST00000615116 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
SCAND1-203ENST00000615116 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
SCAND1-203ENST00000615116 DNAJC5BQ9UF47 199 aa34.43■■■■□ 3.1
SCAND1-203ENST00000615116 CECR2Q9BXF3 1484 aa33.65■■■□□ 2.98
SCAND1-203ENST00000615116 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
SCAND1-203ENST00000615116 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
SCAND1-203ENST00000615116 BAZ1AQ9NRL2 1556 aaPredicted RBP33.54■■■□□ 2.96
SCAND1-203ENST00000615116 SMARCA4P51532 1647 aa33.47■■■□□ 2.95
SCAND1-203ENST00000615116 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
SCAND1-203ENST00000615116 RSF1Q96T23 1441 aaPredicted RBP33.3■■■□□ 2.92
SCAND1-203ENST00000615116 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
SCAND1-203ENST00000615116 WIZO95785 1651 aa33.1■■■□□ 2.89
SCAND1-203ENST00000615116 PEG3Q9GZU2 1588 aa33.1■■■□□ 2.89
SCAND1-203ENST00000615116 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
SCAND1-203ENST00000615116 ATAD2BQ9ULI0 1458 aa33.06■■■□□ 2.88
SCAND1-203ENST00000615116 NCAPD3P42695 1498 aa32.91■■■□□ 2.86
SCAND1-203ENST00000615116 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
SCAND1-203ENST00000615116 HMGXB3Q12766 1538 aa32.84■■■□□ 2.85
SCAND1-203ENST00000615116 TOP2AP11388 1531 aaKnown RBP32.79■■■□□ 2.84
SCAND1-203ENST00000615116 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
SCAND1-203ENST00000615116 ERCC6Q03468 1493 aa32.12■■■□□ 2.73
SCAND1-203ENST00000615116 NESP48681 1621 aa32.09■■■□□ 2.73
SCAND1-203ENST00000615116 CADPSQ9ULU8 1353 aa32■■■□□ 2.71
SCAND1-203ENST00000615116 CFTRP13569 1480 aa31.98■■■□□ 2.71
SCAND1-203ENST00000615116 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.7
SCAND1-203ENST00000615116 PRDM2Q13029 1718 aa31.88■■■□□ 2.69
SCAND1-203ENST00000615116 CUX2O14529 1486 aa31.8■■■□□ 2.68
SCAND1-203ENST00000615116 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
SCAND1-203ENST00000615116 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
SCAND1-203ENST00000615116 KIF21AQ7Z4S6 1674 aa31.59■■■□□ 2.65
SCAND1-203ENST00000615116 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
SCAND1-203ENST00000615116 CEP164Q9UPV0 1460 aa31.54■■■□□ 2.64
SCAND1-203ENST00000615116 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
SCAND1-203ENST00000615116 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
SCAND1-203ENST00000615116 WRNQ14191 1432 aaPredicted RBP eCLIP31.39■■■□□ 2.62
SCAND1-203ENST00000615116 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
SCAND1-203ENST00000615116 WDR62O43379 1518 aa31.31■■■□□ 2.6
SCAND1-203ENST00000615116 CUX1P39880 1505 aa31.29■■■□□ 2.6
SCAND1-203ENST00000615116 DNMBPQ6XZF7 1577 aa31.28■■■□□ 2.6
SCAND1-203ENST00000615116 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
SCAND1-203ENST00000615116 URB2Q14146 1524 aaKnown RBP31.27■■■□□ 2.6
SCAND1-203ENST00000615116 TOP2BQ02880 1626 aa31.26■■■□□ 2.59
SCAND1-203ENST00000615116 BIVM-ERCC5R4GMW8 1640 aa31.25■■■□□ 2.59
SCAND1-203ENST00000615116 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
SCAND1-203ENST00000615116 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
SCAND1-203ENST00000615116 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
SCAND1-203ENST00000615116 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
SCAND1-203ENST00000615116 POLA1P09884 1462 aaPredicted RBP31.02■■■□□ 2.56
SCAND1-203ENST00000615116 SOGA1O94964 1423 aa30.91■■■□□ 2.54
SCAND1-203ENST00000615116 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
SCAND1-203ENST00000615116 IFT140Q96RY7 1462 aa30.84■■■□□ 2.53
SCAND1-203ENST00000615116 TARBP1Q13395 1621 aaKnown RBP30.83■■■□□ 2.53
SCAND1-203ENST00000615116 ABCA10Q8WWZ4 1543 aa30.81■■■□□ 2.52
SCAND1-203ENST00000615116 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
SCAND1-203ENST00000615116 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
SCAND1-203ENST00000615116 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
SCAND1-203ENST00000615116 EEA1Q15075 1411 aa30.64■■■□□ 2.5
SCAND1-203ENST00000615116 TDRD9Q8NDG6 1382 aaKnown RBP30.63■■■□□ 2.49
SCAND1-203ENST00000615116 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
SCAND1-203ENST00000615116 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
SCAND1-203ENST00000615116 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
SCAND1-203ENST00000615116 FAM9AQ8IZU1 332 aaPredicted RBP30.56■■■□□ 2.48
SCAND1-203ENST00000615116 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
SCAND1-203ENST00000615116 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.48
SCAND1-203ENST00000615116 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
SCAND1-203ENST00000615116 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
SCAND1-203ENST00000615116 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
SCAND1-203ENST00000615116 ERICH3Q5RHP9 1530 aa30.46■■■□□ 2.47
SCAND1-203ENST00000615116 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
SCAND1-203ENST00000615116 IGF1RP08069 1367 aa30.44■■■□□ 2.46
SCAND1-203ENST00000615116 CUL7Q14999 1698 aa30.37■■■□□ 2.45
SCAND1-203ENST00000615116 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
SCAND1-203ENST00000615116 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
SCAND1-203ENST00000615116 MAGI1Q96QZ7 1491 aaPredicted RBP30.3■■■□□ 2.44
SCAND1-203ENST00000615116 FBLN2P98095 1184 aa30.28■■■□□ 2.44
SCAND1-203ENST00000615116 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
SCAND1-203ENST00000615116 ADAMTS12P58397 1594 aa30.27■■■□□ 2.44
SCAND1-203ENST00000615116 KIF21BO75037 1637 aa30.26■■■□□ 2.43
SCAND1-203ENST00000615116 FHAD1B1AJZ9 1412 aa30.24■■■□□ 2.43
SCAND1-203ENST00000615116 RAPGEF2Q9Y4G8 1499 aa30.21■■■□□ 2.43
SCAND1-203ENST00000615116 SYNJ2O15056 1496 aa30.16■■■□□ 2.42
SCAND1-203ENST00000615116 GOLGA3Q08378 1498 aa30.15■■■□□ 2.42
SCAND1-203ENST00000615116 CHD1O14646 1710 aa30.11■■■□□ 2.41
SCAND1-203ENST00000615116 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
SCAND1-203ENST00000615116 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
SCAND1-203ENST00000615116 LOC105371045A0A1W2PR82 267 aa30.07■■■□□ 2.4
SCAND1-203ENST00000615116 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
SCAND1-203ENST00000615116 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms