RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
IMP4-204ENST00000428740 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
IMP4-204ENST00000428740 ABCC9O60706 1549 aa32.31■■■□□ 2.76
IMP4-204ENST00000428740 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
IMP4-204ENST00000428740 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
IMP4-204ENST00000428740 NACADO15069 1562 aa30.89■■■□□ 2.54
IMP4-204ENST00000428740 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
IMP4-204ENST00000428740 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
IMP4-204ENST00000428740 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
IMP4-204ENST00000428740 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
IMP4-204ENST00000428740 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
IMP4-204ENST00000428740 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
IMP4-204ENST00000428740 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.39
IMP4-204ENST00000428740 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
IMP4-204ENST00000428740 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
IMP4-204ENST00000428740 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
IMP4-204ENST00000428740 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
IMP4-204ENST00000428740 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
IMP4-204ENST00000428740 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
IMP4-204ENST00000428740 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
IMP4-204ENST00000428740 BAZ1AQ9NRL2 1556 aaPredicted RBP28.46■■■□□ 2.15
IMP4-204ENST00000428740 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
IMP4-204ENST00000428740 SMARCA2P51531 1590 aa28.42■■■□□ 2.14
IMP4-204ENST00000428740 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
IMP4-204ENST00000428740 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
IMP4-204ENST00000428740 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
IMP4-204ENST00000428740 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
IMP4-204ENST00000428740 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
IMP4-204ENST00000428740 WIZO95785 1651 aa27.84■■■□□ 2.05
IMP4-204ENST00000428740 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
IMP4-204ENST00000428740 NESP48681 1621 aa27.83■■■□□ 2.05
IMP4-204ENST00000428740 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
IMP4-204ENST00000428740 CUX2O14529 1486 aa27.76■■■□□ 2.03
IMP4-204ENST00000428740 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
IMP4-204ENST00000428740 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
IMP4-204ENST00000428740 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
IMP4-204ENST00000428740 CFTRP13569 1480 aa27.44■■□□□ 1.98
IMP4-204ENST00000428740 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
IMP4-204ENST00000428740 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
IMP4-204ENST00000428740 DNAJC5Q9H3Z4 198 aa27.36■■□□□ 1.97
IMP4-204ENST00000428740 MRC2Q9UBG0 1479 aa27.35■■□□□ 1.97
IMP4-204ENST00000428740 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
IMP4-204ENST00000428740 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
IMP4-204ENST00000428740 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
IMP4-204ENST00000428740 WDR62O43379 1518 aa27.22■■□□□ 1.95
IMP4-204ENST00000428740 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
IMP4-204ENST00000428740 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
IMP4-204ENST00000428740 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
IMP4-204ENST00000428740 ABCC8Q09428 1581 aa26.95■■□□□ 1.9
IMP4-204ENST00000428740 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
IMP4-204ENST00000428740 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
IMP4-204ENST00000428740 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
IMP4-204ENST00000428740 OSCARQ8IYS5 282 aa26.69■■□□□ 1.86
IMP4-204ENST00000428740 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
IMP4-204ENST00000428740 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
IMP4-204ENST00000428740 SOGA1O94964 1423 aa26.56■■□□□ 1.84
IMP4-204ENST00000428740 TARBP1Q13395 1621 aaKnown RBP26.51■■□□□ 1.83
IMP4-204ENST00000428740 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.835e-7■■■■■ 37.2
IMP4-204ENST00000428740 CUX1P39880 1505 aa26.48■■□□□ 1.83
IMP4-204ENST00000428740 FGD5Q6ZNL6 1462 aa26.47■■□□□ 1.83
IMP4-204ENST00000428740 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
IMP4-204ENST00000428740 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.82
IMP4-204ENST00000428740 TDRD9Q8NDG6 1382 aaKnown RBP26.42■■□□□ 1.82
IMP4-204ENST00000428740 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
IMP4-204ENST00000428740 FBLN2P98095 1184 aa26.33■■□□□ 1.81
IMP4-204ENST00000428740 WRNQ14191 1432 aaPredicted RBP eCLIP26.29■■□□□ 1.8
IMP4-204ENST00000428740 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
IMP4-204ENST00000428740 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
IMP4-204ENST00000428740 CHMP7Q8WUX9 453 aaPredicted RBP26.25■■□□□ 1.79
IMP4-204ENST00000428740 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
IMP4-204ENST00000428740 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
IMP4-204ENST00000428740 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
IMP4-204ENST00000428740 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
IMP4-204ENST00000428740 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
IMP4-204ENST00000428740 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
IMP4-204ENST00000428740 CHD1O14646 1710 aa26.13■■□□□ 1.77
IMP4-204ENST00000428740 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
IMP4-204ENST00000428740 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
IMP4-204ENST00000428740 ARHGEF11O15085 1522 aa26.06■■□□□ 1.76
IMP4-204ENST00000428740 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
IMP4-204ENST00000428740 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
IMP4-204ENST00000428740 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
IMP4-204ENST00000428740 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
IMP4-204ENST00000428740 PBRM1Q86U86 1689 aa26.01■■□□□ 1.75
IMP4-204ENST00000428740 CYB5RLQ6IPT4 315 aa25.97■■□□□ 1.75
IMP4-204ENST00000428740 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
IMP4-204ENST00000428740 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
IMP4-204ENST00000428740 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
IMP4-204ENST00000428740 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
IMP4-204ENST00000428740 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
IMP4-204ENST00000428740 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
IMP4-204ENST00000428740 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
IMP4-204ENST00000428740 NUP160Q12769 1436 aa25.79■■□□□ 1.72
IMP4-204ENST00000428740 IGF1RP08069 1367 aa25.73■■□□□ 1.71
IMP4-204ENST00000428740 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
IMP4-204ENST00000428740 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
IMP4-204ENST00000428740 CARMIL1Q5VZK9 1371 aa25.58■■□□□ 1.69
IMP4-204ENST00000428740 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
IMP4-204ENST00000428740 CUL7Q14999 1698 aa25.58■■□□□ 1.68
IMP4-204ENST00000428740 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms