RNA–Protein interactions for RNA: ENST00000522793.5

TTC1-205, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC1, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-205ENST00000522793 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
TTC1-205ENST00000522793 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
TTC1-205ENST00000522793 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
TTC1-205ENST00000522793 CCDC180Q9P1Z9 1646 aa19.96■□□□□ 0.79
TTC1-205ENST00000522793 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
TTC1-205ENST00000522793 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
TTC1-205ENST00000522793 ABCC9O60706 1549 aa19.12■□□□□ 0.65
TTC1-205ENST00000522793 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
TTC1-205ENST00000522793 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
TTC1-205ENST00000522793 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
TTC1-205ENST00000522793 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
TTC1-205ENST00000522793 NACADO15069 1562 aa18.64■□□□□ 0.58
TTC1-205ENST00000522793 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
TTC1-205ENST00000522793 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
TTC1-205ENST00000522793 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
TTC1-205ENST00000522793 SCRIBQ14160 1630 aa18.33■□□□□ 0.52
TTC1-205ENST00000522793 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
TTC1-205ENST00000522793 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
TTC1-205ENST00000522793 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
TTC1-205ENST00000522793 FOXD1Q16676 465 aa17.71■□□□□ 0.43
TTC1-205ENST00000522793 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
TTC1-205ENST00000522793 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.4
TTC1-205ENST00000522793 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
TTC1-205ENST00000522793 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
TTC1-205ENST00000522793 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
TTC1-205ENST00000522793 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
TTC1-205ENST00000522793 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TTC1-205ENST00000522793 WIZO95785 1651 aa17.41■□□□□ 0.38
TTC1-205ENST00000522793 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.38
TTC1-205ENST00000522793 ADRA2BP18089 450 aa17.38■□□□□ 0.37
TTC1-205ENST00000522793 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
TTC1-205ENST00000522793 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
TTC1-205ENST00000522793 CC2D2AQ9P2K1 1620 aa17.3■□□□□ 0.36
TTC1-205ENST00000522793 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
TTC1-205ENST00000522793 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
TTC1-205ENST00000522793 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
TTC1-205ENST00000522793 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
TTC1-205ENST00000522793 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
TTC1-205ENST00000522793 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
TTC1-205ENST00000522793 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
TTC1-205ENST00000522793 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
TTC1-205ENST00000522793 CFTRP13569 1480 aa16.76■□□□□ 0.27
TTC1-205ENST00000522793 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
TTC1-205ENST00000522793 NESP48681 1621 aa16.71■□□□□ 0.27
TTC1-205ENST00000522793 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
TTC1-205ENST00000522793 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
TTC1-205ENST00000522793 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
TTC1-205ENST00000522793 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
TTC1-205ENST00000522793 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
TTC1-205ENST00000522793 KCNA4P22459 653 aa16.52■□□□□ 0.23
TTC1-205ENST00000522793 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
TTC1-205ENST00000522793 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
TTC1-205ENST00000522793 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
TTC1-205ENST00000522793 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
TTC1-205ENST00000522793 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
TTC1-205ENST00000522793 CUX1P39880 1505 aa16.46■□□□□ 0.23
TTC1-205ENST00000522793 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
TTC1-205ENST00000522793 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
TTC1-205ENST00000522793 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
TTC1-205ENST00000522793 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
TTC1-205ENST00000522793 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
TTC1-205ENST00000522793 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
TTC1-205ENST00000522793 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
TTC1-205ENST00000522793 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
TTC1-205ENST00000522793 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
TTC1-205ENST00000522793 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
TTC1-205ENST00000522793 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
TTC1-205ENST00000522793 WDR62O43379 1518 aa16.3■□□□□ 0.2
TTC1-205ENST00000522793 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.2
TTC1-205ENST00000522793 SOGA1O94964 1423 aa16.24■□□□□ 0.19
TTC1-205ENST00000522793 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
TTC1-205ENST00000522793 RUSC2Q8N2Y8 1516 aa16.19■□□□□ 0.18
TTC1-205ENST00000522793 CUX2O14529 1486 aa16.18■□□□□ 0.18
TTC1-205ENST00000522793 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
TTC1-205ENST00000522793 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
TTC1-205ENST00000522793 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
TTC1-205ENST00000522793 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
TTC1-205ENST00000522793 MSH5O43196 834 aa16.14■□□□□ 0.17
TTC1-205ENST00000522793 IFT140Q96RY7 1462 aa16.11■□□□□ 0.17
TTC1-205ENST00000522793 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
TTC1-205ENST00000522793 EEA1Q15075 1411 aa16.1■□□□□ 0.17
TTC1-205ENST00000522793 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
TTC1-205ENST00000522793 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
TTC1-205ENST00000522793 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
TTC1-205ENST00000522793 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
TTC1-205ENST00000522793 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
TTC1-205ENST00000522793 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
TTC1-205ENST00000522793 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
TTC1-205ENST00000522793 IGF1RP08069 1367 aa16■□□□□ 0.15
TTC1-205ENST00000522793 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
TTC1-205ENST00000522793 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
TTC1-205ENST00000522793 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
TTC1-205ENST00000522793 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.14
TTC1-205ENST00000522793 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
TTC1-205ENST00000522793 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
TTC1-205ENST00000522793 KIF21BO75037 1637 aa15.94■□□□□ 0.14
TTC1-205ENST00000522793 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
TTC1-205ENST00000522793 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
TTC1-205ENST00000522793 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
TTC1-205ENST00000522793 CUL7Q14999 1698 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms