RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
TTC1-202ENST00000518560 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
TTC1-202ENST00000518560 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
TTC1-202ENST00000518560 PHF23Q9BUL5 403 aaPredicted RBP27.75■■■□□ 2.03
TTC1-202ENST00000518560 FOXD1Q16676 465 aa26.27■■□□□ 1.8
TTC1-202ENST00000518560 POTEDQ86YR6 584 aa24.95■■□□□ 1.58
TTC1-202ENST00000518560 MSH5O43196 834 aa24.86■■□□□ 1.57
TTC1-202ENST00000518560 PIAS4Q8N2W9 510 aaPredicted RBP24.52■■□□□ 1.52
TTC1-202ENST00000518560 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
TTC1-202ENST00000518560 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
TTC1-202ENST00000518560 ADRA2BP18089 450 aa24.13■■□□□ 1.45
TTC1-202ENST00000518560 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
TTC1-202ENST00000518560 MAPK8IP2Q13387 824 aaPredicted RBP22.28■■□□□ 1.16
TTC1-202ENST00000518560 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
TTC1-202ENST00000518560 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
TTC1-202ENST00000518560 CACNB1Q02641 598 aaPredicted RBP21.64■■□□□ 1.05
TTC1-202ENST00000518560 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
TTC1-202ENST00000518560 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
TTC1-202ENST00000518560 ABCC9O60706 1549 aa21.44■■□□□ 1.02
TTC1-202ENST00000518560 PPP4R3CPQ6ZMV5 832 aa21.38■■□□□ 1.01
TTC1-202ENST00000518560 HOXD11P31277 338 aaPredicted RBP21.24■□□□□ 0.99
TTC1-202ENST00000518560 CNKSR2Q8WXI2 1034 aa21.1■□□□□ 0.97
TTC1-202ENST00000518560 RNF39Q9H2S5 420 aa21.1■□□□□ 0.97
TTC1-202ENST00000518560 RNF216Q9NWF9 866 aaPredicted RBP21■□□□□ 0.95
TTC1-202ENST00000518560 C1QBPQ07021 282 aaKnown RBP20.83■□□□□ 0.93
TTC1-202ENST00000518560 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
TTC1-202ENST00000518560 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
TTC1-202ENST00000518560 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
TTC1-202ENST00000518560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
TTC1-202ENST00000518560 NACADO15069 1562 aa20.28■□□□□ 0.84
TTC1-202ENST00000518560 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
TTC1-202ENST00000518560 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
TTC1-202ENST00000518560 NPM3O75607 178 aaKnown RBP20.09■□□□□ 0.81
TTC1-202ENST00000518560 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
TTC1-202ENST00000518560 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
TTC1-202ENST00000518560 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
TTC1-202ENST00000518560 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
TTC1-202ENST00000518560 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
TTC1-202ENST00000518560 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
TTC1-202ENST00000518560 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
TTC1-202ENST00000518560 CAPN15O75808 1086 aa19.72■□□□□ 0.75
TTC1-202ENST00000518560 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
TTC1-202ENST00000518560 DSG3P32926 999 aa19.61■□□□□ 0.73
TTC1-202ENST00000518560 POTEHQ6S545 545 aa19.5■□□□□ 0.71
TTC1-202ENST00000518560 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
TTC1-202ENST00000518560 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
TTC1-202ENST00000518560 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
TTC1-202ENST00000518560 APLP2Q06481 763 aa19.35■□□□□ 0.69
TTC1-202ENST00000518560 KCNA4P22459 653 aa19.29■□□□□ 0.68
TTC1-202ENST00000518560 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
TTC1-202ENST00000518560 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
TTC1-202ENST00000518560 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
TTC1-202ENST00000518560 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
TTC1-202ENST00000518560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
TTC1-202ENST00000518560 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
TTC1-202ENST00000518560 ABCB7O75027 752 aa19.16■□□□□ 0.66
TTC1-202ENST00000518560 SAMD1Q6SPF0 538 aaPredicted RBP19.03■□□□□ 0.64
TTC1-202ENST00000518560 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
TTC1-202ENST00000518560 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
TTC1-202ENST00000518560 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
TTC1-202ENST00000518560 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
TTC1-202ENST00000518560 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
TTC1-202ENST00000518560 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
TTC1-202ENST00000518560 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
TTC1-202ENST00000518560 POLA2Q14181 598 aa18.63■□□□□ 0.57
TTC1-202ENST00000518560 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
TTC1-202ENST00000518560 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
TTC1-202ENST00000518560 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
TTC1-202ENST00000518560 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
TTC1-202ENST00000518560 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
TTC1-202ENST00000518560 NESP48681 1621 aa18.49■□□□□ 0.55
TTC1-202ENST00000518560 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
TTC1-202ENST00000518560 WIZO95785 1651 aa18.43■□□□□ 0.54
TTC1-202ENST00000518560 CUX2O14529 1486 aa18.33■□□□□ 0.52
TTC1-202ENST00000518560 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
TTC1-202ENST00000518560 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
TTC1-202ENST00000518560 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
TTC1-202ENST00000518560 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
TTC1-202ENST00000518560 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
TTC1-202ENST00000518560 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
TTC1-202ENST00000518560 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
TTC1-202ENST00000518560 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
TTC1-202ENST00000518560 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
TTC1-202ENST00000518560 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
TTC1-202ENST00000518560 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
TTC1-202ENST00000518560 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
TTC1-202ENST00000518560 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
TTC1-202ENST00000518560 SP7Q8TDD2 431 aaPredicted RBP18.07■□□□□ 0.48
TTC1-202ENST00000518560 REM2Q8IYK8 340 aaPredicted RBP18.06■□□□□ 0.48
TTC1-202ENST00000518560 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
TTC1-202ENST00000518560 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
TTC1-202ENST00000518560 WDR62O43379 1518 aa18■□□□□ 0.47
TTC1-202ENST00000518560 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
TTC1-202ENST00000518560 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
TTC1-202ENST00000518560 CFTRP13569 1480 aa17.98■□□□□ 0.47
TTC1-202ENST00000518560 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
TTC1-202ENST00000518560 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
TTC1-202ENST00000518560 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
TTC1-202ENST00000518560 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
TTC1-202ENST00000518560 HAX1O00165 279 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms