RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
IMP4-207ENST00000460100 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
IMP4-207ENST00000460100 ABCC9O60706 1549 aa30.52■■■□□ 2.48
IMP4-207ENST00000460100 NACADO15069 1562 aa29.43■■■□□ 2.3
IMP4-207ENST00000460100 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
IMP4-207ENST00000460100 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
IMP4-207ENST00000460100 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
IMP4-207ENST00000460100 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
IMP4-207ENST00000460100 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
IMP4-207ENST00000460100 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
IMP4-207ENST00000460100 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
IMP4-207ENST00000460100 PABPN1Q86U42 306 aaKnown RBP eCLIP28.53■■■□□ 2.16
IMP4-207ENST00000460100 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
IMP4-207ENST00000460100 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
IMP4-207ENST00000460100 DNAJC5BQ9UF47 199 aa28.04■■■□□ 2.08
IMP4-207ENST00000460100 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
IMP4-207ENST00000460100 CC2D2AQ9P2K1 1620 aa27.65■■■□□ 2.02
IMP4-207ENST00000460100 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
IMP4-207ENST00000460100 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
IMP4-207ENST00000460100 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
IMP4-207ENST00000460100 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
IMP4-207ENST00000460100 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
IMP4-207ENST00000460100 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
IMP4-207ENST00000460100 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
IMP4-207ENST00000460100 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
IMP4-207ENST00000460100 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
IMP4-207ENST00000460100 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
IMP4-207ENST00000460100 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
IMP4-207ENST00000460100 WIZO95785 1651 aa26.85■■□□□ 1.89
IMP4-207ENST00000460100 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
IMP4-207ENST00000460100 NESP48681 1621 aa26.46■■□□□ 1.83
IMP4-207ENST00000460100 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
IMP4-207ENST00000460100 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
IMP4-207ENST00000460100 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
IMP4-207ENST00000460100 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
IMP4-207ENST00000460100 CFTRP13569 1480 aa26.23■■□□□ 1.79
IMP4-207ENST00000460100 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
IMP4-207ENST00000460100 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
IMP4-207ENST00000460100 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
IMP4-207ENST00000460100 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
IMP4-207ENST00000460100 CUX2O14529 1486 aa26.04■■□□□ 1.76
IMP4-207ENST00000460100 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
IMP4-207ENST00000460100 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
IMP4-207ENST00000460100 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
IMP4-207ENST00000460100 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
IMP4-207ENST00000460100 WDR62O43379 1518 aa25.88■■□□□ 1.73
IMP4-207ENST00000460100 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
IMP4-207ENST00000460100 ABCC8Q09428 1581 aa25.64■■□□□ 1.69
IMP4-207ENST00000460100 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
IMP4-207ENST00000460100 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
IMP4-207ENST00000460100 CUX1P39880 1505 aa25.47■■□□□ 1.67
IMP4-207ENST00000460100 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
IMP4-207ENST00000460100 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
IMP4-207ENST00000460100 TARBP1Q13395 1621 aaKnown RBP25.38■■□□□ 1.65
IMP4-207ENST00000460100 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
IMP4-207ENST00000460100 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
IMP4-207ENST00000460100 SOGA1O94964 1423 aa25.3■■□□□ 1.64
IMP4-207ENST00000460100 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
IMP4-207ENST00000460100 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
IMP4-207ENST00000460100 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
IMP4-207ENST00000460100 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
IMP4-207ENST00000460100 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
IMP4-207ENST00000460100 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
IMP4-207ENST00000460100 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
IMP4-207ENST00000460100 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.62
IMP4-207ENST00000460100 WDR97A6NE52 1622 aa25.18■■□□□ 1.62
IMP4-207ENST00000460100 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
IMP4-207ENST00000460100 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
IMP4-207ENST00000460100 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
IMP4-207ENST00000460100 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
IMP4-207ENST00000460100 GRIN2BQ13224 1484 aa25■■□□□ 1.59
IMP4-207ENST00000460100 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
IMP4-207ENST00000460100 SNAPC4Q5SXM2 1469 aa24.95■■□□□ 1.58
IMP4-207ENST00000460100 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.58
IMP4-207ENST00000460100 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
IMP4-207ENST00000460100 CHD1O14646 1710 aa24.89■■□□□ 1.58
IMP4-207ENST00000460100 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
IMP4-207ENST00000460100 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
IMP4-207ENST00000460100 FBLN2P98095 1184 aa24.79■■□□□ 1.56
IMP4-207ENST00000460100 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
IMP4-207ENST00000460100 KIF27Q86VH2 1401 aa24.77■■□□□ 1.56
IMP4-207ENST00000460100 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
IMP4-207ENST00000460100 FHAD1B1AJZ9 1412 aa24.74■■□□□ 1.55
IMP4-207ENST00000460100 IGF1RP08069 1367 aa24.7■■□□□ 1.55
IMP4-207ENST00000460100 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
IMP4-207ENST00000460100 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
IMP4-207ENST00000460100 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
IMP4-207ENST00000460100 NUP160Q12769 1436 aa24.61■■□□□ 1.53
IMP4-207ENST00000460100 CUL7Q14999 1698 aa24.59■■□□□ 1.53
IMP4-207ENST00000460100 RUSC2Q8N2Y8 1516 aa24.58■■□□□ 1.53
IMP4-207ENST00000460100 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
IMP4-207ENST00000460100 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
IMP4-207ENST00000460100 RIMBP3CA6NJZ7 1639 aa24.55■■□□□ 1.52
IMP4-207ENST00000460100 RIMBP3BA6NNM3 1639 aa24.55■■□□□ 1.52
IMP4-207ENST00000460100 RIMBP3Q9UFD9 1639 aa24.55■■□□□ 1.52
IMP4-207ENST00000460100 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
IMP4-207ENST00000460100 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
IMP4-207ENST00000460100 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
IMP4-207ENST00000460100 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
IMP4-207ENST00000460100 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms