RNA–Protein interactions for RNA: ENST00000325495.8

HNRNPM-201, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HNRNPM, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-201ENST00000325495 NISCHQ9Y2I1 1504 aa40.57■■■■■ 4.09
HNRNPM-201ENST00000325495 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.19
HNRNPM-201ENST00000325495 ZCCHC6Q5VYS8 1495 aaKnown RBP34.11■■■■□ 3.05
HNRNPM-201ENST00000325495 DCAF8L2P0C7V8 631 aa33.94■■■■□ 3.02
HNRNPM-201ENST00000325495 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
HNRNPM-201ENST00000325495 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
HNRNPM-201ENST00000325495 ABCC9O60706 1549 aa33.27■■■□□ 2.92
HNRNPM-201ENST00000325495 MYO15BQ96JP2 1530 aa32.73■■■□□ 2.83
HNRNPM-201ENST00000325495 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
HNRNPM-201ENST00000325495 NACADO15069 1562 aa32.58■■■□□ 2.81
HNRNPM-201ENST00000325495 SCRIBQ14160 1630 aa32.58■■■□□ 2.81
HNRNPM-201ENST00000325495 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
HNRNPM-201ENST00000325495 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
HNRNPM-201ENST00000325495 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
HNRNPM-201ENST00000325495 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.67
HNRNPM-201ENST00000325495 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
HNRNPM-201ENST00000325495 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
HNRNPM-201ENST00000325495 BICRAQ9NZM4 1560 aa31.41■■■□□ 2.62
HNRNPM-201ENST00000325495 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
HNRNPM-201ENST00000325495 WIZO95785 1651 aa31.24■■■□□ 2.59
HNRNPM-201ENST00000325495 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
HNRNPM-201ENST00000325495 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
HNRNPM-201ENST00000325495 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
HNRNPM-201ENST00000325495 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
HNRNPM-201ENST00000325495 CCDC88BA6NC98 1476 aa30.61■■■□□ 2.49
HNRNPM-201ENST00000325495 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
HNRNPM-201ENST00000325495 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
HNRNPM-201ENST00000325495 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
HNRNPM-201ENST00000325495 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
HNRNPM-201ENST00000325495 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
HNRNPM-201ENST00000325495 BAZ1BQ9UIG0 1483 aaKnown RBP30.42■■■□□ 2.46
HNRNPM-201ENST00000325495 PCGF6Q9BYE7 350 aa30.36■■■□□ 2.45
HNRNPM-201ENST00000325495 FAM9AQ8IZU1 332 aaPredicted RBP30.25■■■□□ 2.43
HNRNPM-201ENST00000325495 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
HNRNPM-201ENST00000325495 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
HNRNPM-201ENST00000325495 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
HNRNPM-201ENST00000325495 HMGXB3Q12766 1538 aa30.05■■■□□ 2.4
HNRNPM-201ENST00000325495 HRCP23327 699 aa30.02■■■□□ 2.4
HNRNPM-201ENST00000325495 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
HNRNPM-201ENST00000325495 WRNQ14191 1432 aaPredicted RBP eCLIP29.82■■■□□ 2.36
HNRNPM-201ENST00000325495 PPARGC1BQ86YN6 1023 aaKnown RBP29.79■■■□□ 2.36
HNRNPM-201ENST00000325495 SOGA1O94964 1423 aa29.72■■■□□ 2.35
HNRNPM-201ENST00000325495 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
HNRNPM-201ENST00000325495 CFTRP13569 1480 aa29.63■■■□□ 2.33
HNRNPM-201ENST00000325495 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
HNRNPM-201ENST00000325495 TRIM26Q12899 539 aaPredicted RBP29.58■■■□□ 2.33
HNRNPM-201ENST00000325495 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
HNRNPM-201ENST00000325495 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
HNRNPM-201ENST00000325495 CSRNP3Q8WYN3 585 aa29.47■■■□□ 2.31
HNRNPM-201ENST00000325495 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
HNRNPM-201ENST00000325495 CUX1P39880 1505 aa29.37■■■□□ 2.29
HNRNPM-201ENST00000325495 EEA1Q15075 1411 aa29.36■■■□□ 2.29
HNRNPM-201ENST00000325495 NESP48681 1621 aa29.33■■■□□ 2.29
HNRNPM-201ENST00000325495 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
HNRNPM-201ENST00000325495 PRDM2Q13029 1718 aa29.26■■■□□ 2.27
HNRNPM-201ENST00000325495 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
HNRNPM-201ENST00000325495 FANCD2Q9BXW9 1451 aa29.21■■■□□ 2.27
HNRNPM-201ENST00000325495 GOLGA3Q08378 1498 aa29.11■■■□□ 2.25
HNRNPM-201ENST00000325495 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
HNRNPM-201ENST00000325495 CEP162Q5TB80 1403 aa29.07■■■□□ 2.24
HNRNPM-201ENST00000325495 CEP164Q9UPV0 1460 aa29.06■■■□□ 2.24
HNRNPM-201ENST00000325495 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
HNRNPM-201ENST00000325495 RAPGEF2Q9Y4G8 1499 aa29.03■■■□□ 2.24
HNRNPM-201ENST00000325495 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
HNRNPM-201ENST00000325495 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
HNRNPM-201ENST00000325495 KIF21BO75037 1637 aa28.99■■■□□ 2.23
HNRNPM-201ENST00000325495 KIF27Q86VH2 1401 aa28.99■■■□□ 2.23
HNRNPM-201ENST00000325495 RANGAP1P46060 587 aaPredicted RBP28.95■■■□□ 2.22
HNRNPM-201ENST00000325495 CUX2O14529 1486 aa28.93■■■□□ 2.22
HNRNPM-201ENST00000325495 TOPBP1Q92547 1522 aa28.9■■■□□ 2.22
HNRNPM-201ENST00000325495 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.21
HNRNPM-201ENST00000325495 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
HNRNPM-201ENST00000325495 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
HNRNPM-201ENST00000325495 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
HNRNPM-201ENST00000325495 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
HNRNPM-201ENST00000325495 POLA1P09884 1462 aaPredicted RBP28.82■■■□□ 2.2
HNRNPM-201ENST00000325495 IGF1RP08069 1367 aa28.8■■■□□ 2.2
HNRNPM-201ENST00000325495 KIF21AQ7Z4S6 1674 aa28.78■■■□□ 2.2
HNRNPM-201ENST00000325495 CLIP1P30622 1438 aa28.76■■■□□ 2.19
HNRNPM-201ENST00000325495 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
HNRNPM-201ENST00000325495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.71■■■□□ 2.19
HNRNPM-201ENST00000325495 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
HNRNPM-201ENST00000325495 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
HNRNPM-201ENST00000325495 ZEB1P37275 1124 aaPredicted RBP28.65■■■□□ 2.18
HNRNPM-201ENST00000325495 TDRD9Q8NDG6 1382 aaKnown RBP28.6■■■□□ 2.17
HNRNPM-201ENST00000325495 CCER1Q8TC90 406 aaPredicted RBP28.49■■■□□ 2.15
HNRNPM-201ENST00000325495 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
HNRNPM-201ENST00000325495 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
HNRNPM-201ENST00000325495 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
HNRNPM-201ENST00000325495 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
HNRNPM-201ENST00000325495 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
HNRNPM-201ENST00000325495 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
HNRNPM-201ENST00000325495 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
HNRNPM-201ENST00000325495 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
HNRNPM-201ENST00000325495 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
HNRNPM-201ENST00000325495 APLP2Q06481 763 aa28.34■■■□□ 2.13
HNRNPM-201ENST00000325495 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.132e-8■■■■□ 23.9
HNRNPM-201ENST00000325495 P3H3Q8IVL6 736 aa28.29■■■□□ 2.12
HNRNPM-201ENST00000325495 CUL7Q14999 1698 aa28.28■■■□□ 2.12
HNRNPM-201ENST00000325495 WDR62O43379 1518 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms