RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-205ENST00000595984 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
COPE-205ENST00000595984 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
COPE-205ENST00000595984 ABCC9O60706 1549 aa25.78■■□□□ 1.72
COPE-205ENST00000595984 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
COPE-205ENST00000595984 NACADO15069 1562 aa24.81■■□□□ 1.56
COPE-205ENST00000595984 ZCCHC6Q5VYS8 1495 aaKnown RBP24.79■■□□□ 1.56
COPE-205ENST00000595984 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
COPE-205ENST00000595984 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
COPE-205ENST00000595984 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
COPE-205ENST00000595984 UNC13AQ9UPW8 1703 aa24.41■■□□□ 1.5
COPE-205ENST00000595984 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
COPE-205ENST00000595984 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
COPE-205ENST00000595984 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.441e-10■■■■□ 21.1
COPE-205ENST00000595984 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
COPE-205ENST00000595984 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
COPE-205ENST00000595984 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
COPE-205ENST00000595984 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
COPE-205ENST00000595984 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
COPE-205ENST00000595984 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
COPE-205ENST00000595984 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
COPE-205ENST00000595984 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
COPE-205ENST00000595984 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
COPE-205ENST00000595984 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
COPE-205ENST00000595984 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
COPE-205ENST00000595984 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
COPE-205ENST00000595984 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
COPE-205ENST00000595984 WIZO95785 1651 aa22.74■■□□□ 1.23
COPE-205ENST00000595984 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
COPE-205ENST00000595984 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
COPE-205ENST00000595984 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
COPE-205ENST00000595984 NESP48681 1621 aa22.35■■□□□ 1.17
COPE-205ENST00000595984 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
COPE-205ENST00000595984 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
COPE-205ENST00000595984 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
COPE-205ENST00000595984 ERCC6Q03468 1493 aa22.19■■□□□ 1.14
COPE-205ENST00000595984 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
COPE-205ENST00000595984 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
COPE-205ENST00000595984 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
COPE-205ENST00000595984 CFTRP13569 1480 aa22.09■■□□□ 1.13
COPE-205ENST00000595984 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
COPE-205ENST00000595984 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
COPE-205ENST00000595984 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
COPE-205ENST00000595984 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
COPE-205ENST00000595984 CUX2O14529 1486 aa21.94■■□□□ 1.1
COPE-205ENST00000595984 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
COPE-205ENST00000595984 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
COPE-205ENST00000595984 WDR62O43379 1518 aa21.84■■□□□ 1.09
COPE-205ENST00000595984 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
COPE-205ENST00000595984 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
COPE-205ENST00000595984 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
COPE-205ENST00000595984 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
COPE-205ENST00000595984 CUX1P39880 1505 aa21.51■■□□□ 1.03
COPE-205ENST00000595984 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
COPE-205ENST00000595984 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
COPE-205ENST00000595984 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
COPE-205ENST00000595984 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
COPE-205ENST00000595984 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
COPE-205ENST00000595984 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
COPE-205ENST00000595984 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
COPE-205ENST00000595984 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
COPE-205ENST00000595984 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
COPE-205ENST00000595984 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
COPE-205ENST00000595984 EIF4G3O43432 1585 aaKnown RBP21.35■■□□□ 1.01
COPE-205ENST00000595984 SOGA1O94964 1423 aa21.34■■□□□ 1.01
COPE-205ENST00000595984 WDR97A6NE52 1622 aa21.32■■□□□ 1
COPE-205ENST00000595984 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.998e-9■■■■■ 41.4
COPE-205ENST00000595984 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
COPE-205ENST00000595984 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
COPE-205ENST00000595984 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
COPE-205ENST00000595984 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
COPE-205ENST00000595984 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
COPE-205ENST00000595984 CHD1O14646 1710 aa21.11■□□□□ 0.97
COPE-205ENST00000595984 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
COPE-205ENST00000595984 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
COPE-205ENST00000595984 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
COPE-205ENST00000595984 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
COPE-205ENST00000595984 OSCARQ8IYS5 282 aa21■□□□□ 0.95
COPE-205ENST00000595984 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
COPE-205ENST00000595984 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
COPE-205ENST00000595984 FBLN2P98095 1184 aa20.95■□□□□ 0.94
COPE-205ENST00000595984 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
COPE-205ENST00000595984 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
COPE-205ENST00000595984 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
COPE-205ENST00000595984 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
COPE-205ENST00000595984 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
COPE-205ENST00000595984 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
COPE-205ENST00000595984 CUL7Q14999 1698 aa20.81■□□□□ 0.92
COPE-205ENST00000595984 IGF1RP08069 1367 aa20.8■□□□□ 0.92
COPE-205ENST00000595984 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
COPE-205ENST00000595984 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
COPE-205ENST00000595984 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
COPE-205ENST00000595984 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
COPE-205ENST00000595984 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
COPE-205ENST00000595984 NUP160Q12769 1436 aa20.73■□□□□ 0.91
COPE-205ENST00000595984 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
COPE-205ENST00000595984 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
COPE-205ENST00000595984 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
COPE-205ENST00000595984 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
COPE-205ENST00000595984 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
COPE-205ENST00000595984 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms