RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 NISCHQ9Y2I1 1504 aa48.92■■■■■ 5.42
COPE-208ENST00000598969 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
COPE-208ENST00000598969 ABCC9O60706 1549 aa41.19■■■■■ 4.18
COPE-208ENST00000598969 ZCCHC6Q5VYS8 1495 aaKnown RBP40.97■■■■■ 4.15
COPE-208ENST00000598969 DCAF8L2P0C7V8 631 aa40.49■■■■■ 4.07
COPE-208ENST00000598969 DCAF1Q9Y4B6 1507 aa40.48■■■■■ 4.07
COPE-208ENST00000598969 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.03
COPE-208ENST00000598969 NACADO15069 1562 aa40.18■■■■■ 4.02
COPE-208ENST00000598969 RB1CC1Q8TDY2 1594 aa39.97■■■■□ 3.99
COPE-208ENST00000598969 SCRIBQ14160 1630 aa39.38■■■■□ 3.89
COPE-208ENST00000598969 SHROOM4Q9ULL8 1493 aa39.34■■■■□ 3.89
COPE-208ENST00000598969 UNC13AQ9UPW8 1703 aa39.15■■■■□ 3.86
COPE-208ENST00000598969 BICRAQ9NZM4 1560 aa38.81■■■■□ 3.8
COPE-208ENST00000598969 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.781e-10■■■■□ 21.1
COPE-208ENST00000598969 CECR2Q9BXF3 1484 aa38.06■■■■□ 3.68
COPE-208ENST00000598969 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
COPE-208ENST00000598969 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
COPE-208ENST00000598969 SMARCA4P51532 1647 aa37.73■■■■□ 3.63
COPE-208ENST00000598969 RSF1Q96T23 1441 aaPredicted RBP37.68■■■■□ 3.62
COPE-208ENST00000598969 EIF4G1Q04637 1599 aaKnown RBP37.67■■■■□ 3.62
COPE-208ENST00000598969 SUPT5HO00267 1087 aaKnown RBP37.51■■■■□ 3.6
COPE-208ENST00000598969 WIZO95785 1651 aa37.39■■■■□ 3.58
COPE-208ENST00000598969 PEG3Q9GZU2 1588 aa37.33■■■■□ 3.57
COPE-208ENST00000598969 ATAD2BQ9ULI0 1458 aa37.29■■■■□ 3.56
COPE-208ENST00000598969 CC2D2AQ9P2K1 1620 aa37.28■■■■□ 3.56
COPE-208ENST00000598969 SMARCA2P51531 1590 aa37.24■■■■□ 3.55
COPE-208ENST00000598969 NCAPD3P42695 1498 aa37.09■■■■□ 3.53
COPE-208ENST00000598969 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.52
COPE-208ENST00000598969 TOP2AP11388 1531 aaKnown RBP37.01■■■■□ 3.52
COPE-208ENST00000598969 HMGXB3Q12766 1538 aa36.98■■■■□ 3.51
COPE-208ENST00000598969 DNAJC5BQ9UF47 199 aa36.96■■■■□ 3.51
COPE-208ENST00000598969 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
COPE-208ENST00000598969 CFTRP13569 1480 aa36.08■■■■□ 3.37
COPE-208ENST00000598969 CADPSQ9ULU8 1353 aa36.08■■■■□ 3.37
COPE-208ENST00000598969 NESP48681 1621 aa35.96■■■■□ 3.35
COPE-208ENST00000598969 LAMC3Q9Y6N6 1575 aa35.92■■■■□ 3.34
COPE-208ENST00000598969 PRDM2Q13029 1718 aa35.83■■■■□ 3.33
COPE-208ENST00000598969 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
COPE-208ENST00000598969 PDS5BQ9NTI5 1447 aa35.65■■■■□ 3.3
COPE-208ENST00000598969 CHIC1Q5VXU3 224 aa35.61■■■■□ 3.29
COPE-208ENST00000598969 ABCC8Q09428 1581 aa35.6■■■■□ 3.29
COPE-208ENST00000598969 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
COPE-208ENST00000598969 CEP164Q9UPV0 1460 aa35.5■■■■□ 3.27
COPE-208ENST00000598969 WRNQ14191 1432 aaPredicted RBP eCLIP35.47■■■■□ 3.27
COPE-208ENST00000598969 SYNJ1O43426 1573 aa35.37■■■■□ 3.25
COPE-208ENST00000598969 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
COPE-208ENST00000598969 CUX1P39880 1505 aa35.35■■■■□ 3.25
COPE-208ENST00000598969 TRIM41Q8WV44 630 aa35.33■■■■□ 3.25
COPE-208ENST00000598969 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
COPE-208ENST00000598969 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
COPE-208ENST00000598969 BIVM-ERCC5R4GMW8 1640 aa35.26■■■■□ 3.23
COPE-208ENST00000598969 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
COPE-208ENST00000598969 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
COPE-208ENST00000598969 TOPBP1Q92547 1522 aa35.22■■■■□ 3.23
COPE-208ENST00000598969 THOC2Q8NI27 1593 aaKnown RBP35.15■■■■□ 3.22
COPE-208ENST00000598969 WDR62O43379 1518 aa35.1■■■■□ 3.21
COPE-208ENST00000598969 FGD5Q6ZNL6 1462 aa35.06■■■■□ 3.2
COPE-208ENST00000598969 POLA1P09884 1462 aaPredicted RBP34.99■■■■□ 3.19
COPE-208ENST00000598969 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
COPE-208ENST00000598969 SOGA1O94964 1423 aa34.85■■■■□ 3.17
COPE-208ENST00000598969 CUX2O14529 1486 aa34.85■■■■□ 3.17
COPE-208ENST00000598969 TARBP1Q13395 1621 aaKnown RBP34.76■■■■□ 3.15
COPE-208ENST00000598969 ABCA10Q8WWZ4 1543 aa34.75■■■■□ 3.15
COPE-208ENST00000598969 RUSC2Q8N2Y8 1516 aa34.73■■■■□ 3.15
COPE-208ENST00000598969 IFT140Q96RY7 1462 aa34.72■■■■□ 3.15
COPE-208ENST00000598969 WDR97A6NE52 1622 aa34.7■■■■□ 3.15
COPE-208ENST00000598969 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
COPE-208ENST00000598969 KIF27Q86VH2 1401 aa34.62■■■■□ 3.13
COPE-208ENST00000598969 EEA1Q15075 1411 aa34.61■■■■□ 3.13
COPE-208ENST00000598969 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
COPE-208ENST00000598969 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
COPE-208ENST00000598969 ABCA5Q8WWZ7 1642 aa34.53■■■■□ 3.12
COPE-208ENST00000598969 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.113e-7■■■■□ 21.7
COPE-208ENST00000598969 CSRNP3Q8WYN3 585 aa34.47■■■■□ 3.11
COPE-208ENST00000598969 GAPVD1Q14C86 1478 aa34.47■■■■□ 3.11
COPE-208ENST00000598969 IGF1RP08069 1367 aa34.42■■■■□ 3.1
COPE-208ENST00000598969 EIF4G3O43432 1585 aaKnown RBP34.41■■■■□ 3.1
COPE-208ENST00000598969 ERICH3Q5RHP9 1530 aa34.33■■■■□ 3.09
COPE-208ENST00000598969 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
COPE-208ENST00000598969 GRIN2BQ13224 1484 aa34.31■■■■□ 3.08
COPE-208ENST00000598969 PRXQ9BXM0 1461 aa34.26■■■■□ 3.08
COPE-208ENST00000598969 CARMIL1Q5VZK9 1371 aa34.21■■■■□ 3.07
COPE-208ENST00000598969 KIF21BO75037 1637 aa34.2■■■■□ 3.07
COPE-208ENST00000598969 CUL7Q14999 1698 aa34.2■■■■□ 3.06
COPE-208ENST00000598969 LOC105371045A0A1W2PR82 267 aa34.19■■■■□ 3.06
COPE-208ENST00000598969 SNAPC4Q5SXM2 1469 aa34.15■■■■□ 3.06
COPE-208ENST00000598969 EHMT2Q96KQ7 1210 aa34.14■■■■□ 3.06
COPE-208ENST00000598969 RAPGEF2Q9Y4G8 1499 aa34.14■■■■□ 3.06
COPE-208ENST00000598969 ADAMTS12P58397 1594 aa34.12■■■■□ 3.05
COPE-208ENST00000598969 MAGI1Q96QZ7 1491 aaPredicted RBP34.1■■■■□ 3.05
COPE-208ENST00000598969 GOLGA3Q08378 1498 aa34.09■■■■□ 3.05
COPE-208ENST00000598969 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
COPE-208ENST00000598969 SYNJ2O15056 1496 aa33.96■■■■□ 3.03
COPE-208ENST00000598969 UBTFP17480 764 aaKnown RBP33.92■■■■□ 3.02
COPE-208ENST00000598969 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
COPE-208ENST00000598969 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
COPE-208ENST00000598969 TNIKQ9UKE5 1360 aa33.87■■■■□ 3.01
COPE-208ENST00000598969 FBLN2P98095 1184 aa33.83■■■■□ 3.01
COPE-208ENST00000598969 CHD1O14646 1710 aa33.78■■■■□ 3
COPE-208ENST00000598969 CTTNBP2Q8WZ74 1663 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms