RNA–Protein interactions for RNA: ENST00000590212.1

SNRPD2-208, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-208ENST00000590212 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
SNRPD2-208ENST00000590212 ABCC9O60706 1549 aa23.03■■□□□ 1.28
SNRPD2-208ENST00000590212 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
SNRPD2-208ENST00000590212 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
SNRPD2-208ENST00000590212 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
SNRPD2-208ENST00000590212 NACADO15069 1562 aa21.48■■□□□ 1.03
SNRPD2-208ENST00000590212 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNRPD2-208ENST00000590212 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
SNRPD2-208ENST00000590212 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
SNRPD2-208ENST00000590212 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
SNRPD2-208ENST00000590212 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
SNRPD2-208ENST00000590212 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
SNRPD2-208ENST00000590212 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
SNRPD2-208ENST00000590212 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
SNRPD2-208ENST00000590212 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
SNRPD2-208ENST00000590212 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
SNRPD2-208ENST00000590212 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
SNRPD2-208ENST00000590212 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
SNRPD2-208ENST00000590212 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
SNRPD2-208ENST00000590212 CUX2O14529 1486 aa20.05■□□□□ 0.8
SNRPD2-208ENST00000590212 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
SNRPD2-208ENST00000590212 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
SNRPD2-208ENST00000590212 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
SNRPD2-208ENST00000590212 NESP48681 1621 aa19.65■□□□□ 0.74
SNRPD2-208ENST00000590212 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
SNRPD2-208ENST00000590212 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
SNRPD2-208ENST00000590212 SMARCA4P51532 1647 aa19.57■□□□□ 0.72
SNRPD2-208ENST00000590212 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
SNRPD2-208ENST00000590212 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
SNRPD2-208ENST00000590212 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
SNRPD2-208ENST00000590212 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
SNRPD2-208ENST00000590212 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
SNRPD2-208ENST00000590212 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
SNRPD2-208ENST00000590212 KIF21AQ7Z4S6 1674 aa19.39■□□□□ 0.69
SNRPD2-208ENST00000590212 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
SNRPD2-208ENST00000590212 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
SNRPD2-208ENST00000590212 MROH2BQ7Z745 1585 aa19.22■□□□□ 0.67
SNRPD2-208ENST00000590212 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
SNRPD2-208ENST00000590212 WDR62O43379 1518 aa19.19■□□□□ 0.66
SNRPD2-208ENST00000590212 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
SNRPD2-208ENST00000590212 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
SNRPD2-208ENST00000590212 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
SNRPD2-208ENST00000590212 WIZO95785 1651 aa18.97■□□□□ 0.63
SNRPD2-208ENST00000590212 CFTRP13569 1480 aa18.9■□□□□ 0.62
SNRPD2-208ENST00000590212 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
SNRPD2-208ENST00000590212 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
SNRPD2-208ENST00000590212 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
SNRPD2-208ENST00000590212 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
SNRPD2-208ENST00000590212 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
SNRPD2-208ENST00000590212 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
SNRPD2-208ENST00000590212 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
SNRPD2-208ENST00000590212 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
SNRPD2-208ENST00000590212 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
SNRPD2-208ENST00000590212 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
SNRPD2-208ENST00000590212 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
SNRPD2-208ENST00000590212 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
SNRPD2-208ENST00000590212 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
SNRPD2-208ENST00000590212 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SNRPD2-208ENST00000590212 CHD1O14646 1710 aa18.53■□□□□ 0.56
SNRPD2-208ENST00000590212 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
SNRPD2-208ENST00000590212 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
SNRPD2-208ENST00000590212 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
SNRPD2-208ENST00000590212 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
SNRPD2-208ENST00000590212 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNRPD2-208ENST00000590212 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
SNRPD2-208ENST00000590212 FBLN2P98095 1184 aa18.44■□□□□ 0.54
SNRPD2-208ENST00000590212 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
SNRPD2-208ENST00000590212 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
SNRPD2-208ENST00000590212 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
SNRPD2-208ENST00000590212 RAD54L2Q9Y4B4 1467 aa18.29■□□□□ 0.52
SNRPD2-208ENST00000590212 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
SNRPD2-208ENST00000590212 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
SNRPD2-208ENST00000590212 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
SNRPD2-208ENST00000590212 SOGA1O94964 1423 aa18.26■□□□□ 0.51
SNRPD2-208ENST00000590212 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
SNRPD2-208ENST00000590212 CHMP7Q8WUX9 453 aaPredicted RBP18.24■□□□□ 0.51
SNRPD2-208ENST00000590212 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
SNRPD2-208ENST00000590212 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
SNRPD2-208ENST00000590212 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
SNRPD2-208ENST00000590212 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
SNRPD2-208ENST00000590212 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.5
SNRPD2-208ENST00000590212 CUX1P39880 1505 aa18.08■□□□□ 0.49
SNRPD2-208ENST00000590212 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
SNRPD2-208ENST00000590212 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
SNRPD2-208ENST00000590212 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
SNRPD2-208ENST00000590212 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SNRPD2-208ENST00000590212 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
SNRPD2-208ENST00000590212 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
SNRPD2-208ENST00000590212 NUP160Q12769 1436 aa17.89■□□□□ 0.45
SNRPD2-208ENST00000590212 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
SNRPD2-208ENST00000590212 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
SNRPD2-208ENST00000590212 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
SNRPD2-208ENST00000590212 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
SNRPD2-208ENST00000590212 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.44
SNRPD2-208ENST00000590212 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
SNRPD2-208ENST00000590212 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
SNRPD2-208ENST00000590212 ABCC10Q5T3U5 1492 aa17.73■□□□□ 0.43
SNRPD2-208ENST00000590212 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
SNRPD2-208ENST00000590212 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
SNRPD2-208ENST00000590212 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms