Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.63e-6■■□□□ 13.3
PABPN1Q86U42 PPAN-207ENST00000468881 627 ntTSL 237.44■■■■□ 3.583e-6■■□□□ 13.3
PABPN1Q86U42 NT5C3B-202ENST00000415460 730 ntTSL 537.14■■■■□ 3.549e-12■■□□□ 13.3
PABPN1Q86U42 HDGFL2-201ENST00000587016 870 ntTSL 336.35■■■■□ 3.413e-6■■□□□ 13.3
PABPN1Q86U42 AKAP8L-209ENST00000595879 790 ntTSL 336.02■■■■□ 3.363e-9■■□□□ 13.3
PABPN1Q86U42 CKB-204ENST00000553652 1239 ntTSL 535.6■■■■□ 3.293e-6■■□□□ 13.3
PABPN1Q86U42 CKB-203ENST00000553610 542 ntTSL 334.39■■■■□ 3.13e-6■■□□□ 13.3
PABPN1Q86U42 CKB-202ENST00000553528 1170 ntTSL 233.27■■■□□ 2.923e-6■■□□□ 13.3
PABPN1Q86U42 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.863e-6■■□□□ 13.3
PABPN1Q86U42 EIF4G1-234ENST00000478291 564 ntTSL 232.29■■■□□ 2.763e-6■■□□□ 13.3
PABPN1Q86U42 FLOT1-209ENST00000476729 562 ntTSL 232.14■■■□□ 2.742e-17■■□□□ 13.3
PABPN1Q86U42 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.97■■■□□ 2.713e-6■■□□□ 13.3
PABPN1Q86U42 CKB-210ENST00000554989 625 ntTSL 230.77■■■□□ 2.523e-6■■□□□ 13.3
PABPN1Q86U42 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.433e-6■■□□□ 13.3
PABPN1Q86U42 AGAP3-203ENST00000461065 1707 ntTSL 1 (best)28.18■■■□□ 2.13e-6■■□□□ 13.3
PABPN1Q86U42 GBA2-206ENST00000486797 772 ntTSL 528■■■□□ 2.073e-6■■□□□ 13.3
PABPN1Q86U42 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC27.91■■■□□ 2.063e-6■■□□□ 13.3
PABPN1Q86U42 FLOT1-205ENST00000438162 888 ntTSL 527.2■■□□□ 1.942e-17■■□□□ 13.3
PABPN1Q86U42 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC26.84■■□□□ 1.894e-6■■□□□ 13.3
PABPN1Q86U42 CKB-211ENST00000555039 270 ntTSL 526.74■■□□□ 1.873e-6■■□□□ 13.3
PABPN1Q86U42 HDGFL2-207ENST00000615225 3100 ntTSL 526.03■■□□□ 1.763e-6■■□□□ 13.3
PABPN1Q86U42 GBA2-204ENST00000467252 1913 ntTSL 1 (best)24.88■■□□□ 1.573e-6■■□□□ 13.3
PABPN1Q86U42 EIF4G1-231ENST00000464548 637 ntTSL 524.84■■□□□ 1.573e-6■■□□□ 13.3
PABPN1Q86U42 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.523e-6■■□□□ 13.3
PABPN1Q86U42 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.369e-12■■□□□ 13.3
PABPN1Q86U42 EIF4G1-211ENST00000422614 750 ntTSL 523.37■■□□□ 1.333e-6■■□□□ 13.3
PABPN1Q86U42 SUPT5H-217ENST00000599907 859 ntTSL 422.3■■□□□ 1.163e-6■■□□□ 13.3
PABPN1Q86U42 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.093e-6■■□□□ 13.3
PABPN1Q86U42 IK-211ENST00000610522 737 ntTSL 5 BASIC21.31■■□□□ 13e-6■■□□□ 13.3
PABPN1Q86U42 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.984e-6■■□□□ 13.3
PABPN1Q86U42 PLA2G4B-205ENST00000566076 379 ntTSL 220.47■□□□□ 0.873e-6■■□□□ 13.3
PABPN1Q86U42 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.863e-6■■□□□ 13.3
PABPN1Q86U42 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC19.72■□□□□ 0.753e-6■■□□□ 13.3
PABPN1Q86U42 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.423e-6■■□□□ 13.3
PABPN1Q86U42 AGAP3-212ENST00000473633 3751 ntTSL 1 (best)15.41■□□□□ 0.063e-6■■□□□ 13.3
PABPN1Q86U42 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.054e-6■■□□□ 13.3
PABPN1Q86U42 AKAP8L-206ENST00000595087 796 ntTSL 215.21■□□□□ 0.033e-9■■□□□ 13.3
PABPN1Q86U42 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.014e-6■■□□□ 13.3
PABPN1Q86U42 NOP58-206ENST00000478508 599 ntTSL 213.7□□□□□ -0.229e-12■■□□□ 13.3
PABPN1Q86U42 SUPT5H-205ENST00000593727 493 ntTSL 313.19□□□□□ -0.33e-6■■□□□ 13.3
PABPN1Q86U42 IK-209ENST00000515592 1964 ntTSL 210.4□□□□□ -0.743e-6■■□□□ 13.3
PABPN1Q86U42 HDAC10-212ENST00000477814 1784 ntTSL 236.2■■■■□ 3.398e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-221ENST00000498366 2153 ntTSL 533.96■■■■□ 3.038e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-206ENST00000454936 1922 ntTSL 232.83■■■□□ 2.858e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)32.7■■■□□ 2.838e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC30.31■■■□□ 2.448e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC30.25■■■□□ 2.438e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-214ENST00000483222 2091 ntTSL 530.19■■■□□ 2.428e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)29.62■■■□□ 2.338e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC27.88■■■□□ 2.058e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.058e-8■■□□□ 13.3
PABPN1Q86U42 MAPK12-209ENST00000497036 6248 ntTSL 226.18■■□□□ 1.788e-8■■□□□ 13.3
PABPN1Q86U42 HDAC10-220ENST00000497952 976 ntTSL 522.53■■□□□ 1.28e-8■■□□□ 13.3
PABPN1Q86U42 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)23.41■■□□□ 1.341e-6■■□□□ 13.3
PABPN1Q86U42 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.731e-6■■□□□ 13.3
PABPN1Q86U42 TTLL3-227ENST00000482269 882 ntTSL 234.26■■■■□ 3.083e-6■■□□□ 13.3
PABPN1Q86U42 TTLL3-214ENST00000431204 1041 ntTSL 525.33■■□□□ 1.653e-6■■□□□ 13.3
PABPN1Q86U42 TTLL3-201ENST00000310252 1561 ntAPPRIS ALT2 TSL 1 (best)21.57■■□□□ 1.043e-6■■□□□ 13.3
PABPN1Q86U42 TTLL3-223ENST00000466245 616 ntTSL 321.13■□□□□ 0.973e-6■■□□□ 13.3
PABPN1Q86U42 AKT1-209ENST00000554585 858 ntTSL 335.37■■■■□ 3.252e-6■■□□□ 13.3
PABPN1Q86U42 AKT1-207ENST00000554192 922 ntTSL 227.55■■■□□ 22e-6■■□□□ 13.3
PABPN1Q86U42 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC38.52■■■■□ 3.766e-12■■□□□ 13.3
PABPN1Q86U42 PCYT2-214ENST00000573636 913 ntTSL 549.65■■■■■ 5.542e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC30.95■■■□□ 2.548e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.998e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.788e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.28e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-201ENST00000550331 733 ntTSL 216.16■□□□□ 0.188e-7■■□□□ 13.3
PABPN1Q86U42 NEK3-207ENST00000617054 3256 ntTSL 513.58□□□□□ -0.248e-7■■□□□ 13.3
PABPN1Q86U42 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.778e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-216ENST00000489707 1935 ntTSL 1 (best)25.3■■□□□ 1.648e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-208ENST00000470019 4016 ntTSL 523.62■■□□□ 1.378e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-201ENST00000230418 3958 ntTSL 1 (best)23.06■■□□□ 1.288e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC22.18■■□□□ 1.148e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC21.99■■□□□ 1.118e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-215ENST00000487673 5282 ntTSL 221.67■■□□□ 1.068e-8■■□□□ 13.3
PABPN1Q86U42 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC20.66■□□□□ 0.98e-8■■□□□ 13.3
PABPN1Q86U42 GRAMD1A-214ENST00000603907 450 ntTSL 241.88■■■■■ 4.291e-9■■□□□ 13.3
PABPN1Q86U42 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.231e-6■■□□□ 13.3
PABPN1Q86U42 NOP56-220ENST00000616692 2662 ntTSL 1 (best)27.75■■■□□ 2.031e-6■■□□□ 13.3
PABPN1Q86U42 NOP56-219ENST00000612233 2980 nt21.99■■□□□ 1.111e-6■■□□□ 13.3
PABPN1Q86U42 NOP56-202ENST00000415272 1628 ntTSL 520.67■□□□□ 0.91e-6■■□□□ 13.3
PABPN1Q86U42 NOP56-207ENST00000467196 1320 ntTSL 518.33■□□□□ 0.531e-6■■□□□ 13.3
PABPN1Q86U42 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.243e-13■■□□□ 13.3
PABPN1Q86U42 HGD-209ENST00000492108 631 ntTSL 213.46□□□□□ -0.253e-13■■□□□ 13.3
PABPN1Q86U42 PLXNB1-216ENST00000483753 424 ntTSL 225.92■■□□□ 1.749e-13■■□□□ 13.3
PABPN1Q86U42 NPEPL1-209ENST00000533788 899 ntTSL 531.34■■■□□ 2.614e-8■■□□□ 13.3
PABPN1Q86U42 QARS-224ENST00000497635 386 ntTSL 322.06■■□□□ 1.129e-7■■□□□ 13.3
PABPN1Q86U42 CDK5RAP3-223ENST00000582114 647 ntTSL 224.36■■□□□ 1.495e-11■■□□□ 13.3
PABPN1Q86U42 FARP1-230ENST00000600380 510 ntTSL 322.95■■□□□ 1.264e-22■■□□□ 13.3
PABPN1Q86U42 FARP1-221ENST00000597596 439 ntTSL 312.59□□□□□ -0.394e-22■■□□□ 13.3
PABPN1Q86U42 ATP13A1-207ENST00000473243 4729 ntTSL 222.77■■□□□ 1.243e-7■■□□□ 13.3
PABPN1Q86U42 ATP13A1-214ENST00000497556 2442 ntTSL 222.66■■□□□ 1.223e-7■■□□□ 13.3
PABPN1Q86U42 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.943e-7■■□□□ 13.3
PABPN1Q86U42 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.363e-7■■□□□ 13.3
PABPN1Q86U42 NADSYN1-208ENST00000527227 799 ntTSL 340.2■■■■■ 4.034e-6■■□□□ 13.3
PABPN1Q86U42 SLC12A4-212ENST00000573023 3649 ntTSL 529.3■■■□□ 2.282e-6■■□□□ 13.3
PABPN1Q86U42 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.952e-6■■□□□ 13.3
PABPN1Q86U42 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.892e-6■■□□□ 13.3
PABPN1Q86U42 UBR4-208ENST00000459947 3873 ntTSL 220.57■□□□□ 0.884e-8■■□□□ 13.3
Retrieved 100 of 8,254 protein–RNA pairs in 214.3 ms