RNA–Protein interactions for RNA: ENST00000428099.5

NFKB2-204, Transcript of nuclear factor kappa B subunit 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NFKB2, Length 3,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2-204ENST00000428099 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
NFKB2-204ENST00000428099 HRCP23327 699 aa24.12■■□□□ 1.45
NFKB2-204ENST00000428099 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
NFKB2-204ENST00000428099 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
NFKB2-204ENST00000428099 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
NFKB2-204ENST00000428099 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
NFKB2-204ENST00000428099 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
NFKB2-204ENST00000428099 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
NFKB2-204ENST00000428099 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
NFKB2-204ENST00000428099 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
NFKB2-204ENST00000428099 LOC105371045A0A1W2PR82 267 aa22.73■■□□□ 1.23
NFKB2-204ENST00000428099 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
NFKB2-204ENST00000428099 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
NFKB2-204ENST00000428099 MYT1Q01538 1121 aa22.63■■□□□ 1.21
NFKB2-204ENST00000428099 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
NFKB2-204ENST00000428099 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
NFKB2-204ENST00000428099 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
NFKB2-204ENST00000428099 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
NFKB2-204ENST00000428099 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
NFKB2-204ENST00000428099 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
NFKB2-204ENST00000428099 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
NFKB2-204ENST00000428099 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
NFKB2-204ENST00000428099 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
NFKB2-204ENST00000428099 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
NFKB2-204ENST00000428099 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
NFKB2-204ENST00000428099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
NFKB2-204ENST00000428099 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
NFKB2-204ENST00000428099 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
NFKB2-204ENST00000428099 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
NFKB2-204ENST00000428099 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
NFKB2-204ENST00000428099 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
NFKB2-204ENST00000428099 MIER1Q8N108 512 aa21.32■■□□□ 1
NFKB2-204ENST00000428099 BCL11AQ9H165 835 aa21.32■■□□□ 1
NFKB2-204ENST00000428099 ABCC9O60706 1549 aa21.18■□□□□ 0.98
NFKB2-204ENST00000428099 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
NFKB2-204ENST00000428099 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
NFKB2-204ENST00000428099 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
NFKB2-204ENST00000428099 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
NFKB2-204ENST00000428099 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
NFKB2-204ENST00000428099 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
NFKB2-204ENST00000428099 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
NFKB2-204ENST00000428099 HNRNPUL2Q1KMD3 747 aaKnown RBP20.85■□□□□ 0.93
NFKB2-204ENST00000428099 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.93
NFKB2-204ENST00000428099 BCANQ96GW7 911 aa20.78■□□□□ 0.92
NFKB2-204ENST00000428099 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
NFKB2-204ENST00000428099 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
NFKB2-204ENST00000428099 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
NFKB2-204ENST00000428099 FKBP8Q14318 412 aa20.55■□□□□ 0.88
NFKB2-204ENST00000428099 PRKCSHP14314 528 aaPredicted RBP20.54■□□□□ 0.88
NFKB2-204ENST00000428099 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
NFKB2-204ENST00000428099 NACADO15069 1562 aa20.52■□□□□ 0.87
NFKB2-204ENST00000428099 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
NFKB2-204ENST00000428099 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
NFKB2-204ENST00000428099 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
NFKB2-204ENST00000428099 ITGAEP38570 1179 aa20.43■□□□□ 0.86
NFKB2-204ENST00000428099 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
NFKB2-204ENST00000428099 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.863e-6■■□□□ 13.3
NFKB2-204ENST00000428099 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
NFKB2-204ENST00000428099 SOGA1O94964 1423 aa20.38■□□□□ 0.85
NFKB2-204ENST00000428099 NEFLP07196 543 aa20.37■□□□□ 0.85
NFKB2-204ENST00000428099 WIZO95785 1651 aa20.36■□□□□ 0.85
NFKB2-204ENST00000428099 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
NFKB2-204ENST00000428099 MSH5O43196 834 aa20.35■□□□□ 0.85
NFKB2-204ENST00000428099 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
NFKB2-204ENST00000428099 APLP2Q06481 763 aa20.34■□□□□ 0.85
NFKB2-204ENST00000428099 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
NFKB2-204ENST00000428099 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
NFKB2-204ENST00000428099 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
NFKB2-204ENST00000428099 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
NFKB2-204ENST00000428099 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
NFKB2-204ENST00000428099 GOLGA3Q08378 1498 aa20.17■□□□□ 0.82
NFKB2-204ENST00000428099 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
NFKB2-204ENST00000428099 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
NFKB2-204ENST00000428099 CLIP1P30622 1438 aa20.11■□□□□ 0.81
NFKB2-204ENST00000428099 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
NFKB2-204ENST00000428099 EEA1Q15075 1411 aa20.09■□□□□ 0.81
NFKB2-204ENST00000428099 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
NFKB2-204ENST00000428099 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
NFKB2-204ENST00000428099 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
NFKB2-204ENST00000428099 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
NFKB2-204ENST00000428099 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
NFKB2-204ENST00000428099 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
NFKB2-204ENST00000428099 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
NFKB2-204ENST00000428099 NBR1Q14596 966 aa19.95■□□□□ 0.78
NFKB2-204ENST00000428099 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
NFKB2-204ENST00000428099 ANP32CO43423 234 aa19.9■□□□□ 0.78
NFKB2-204ENST00000428099 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
NFKB2-204ENST00000428099 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
NFKB2-204ENST00000428099 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
NFKB2-204ENST00000428099 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
NFKB2-204ENST00000428099 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.77
NFKB2-204ENST00000428099 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
NFKB2-204ENST00000428099 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
NFKB2-204ENST00000428099 CCDC136Q96JN2 1154 aa19.8■□□□□ 0.76
NFKB2-204ENST00000428099 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
NFKB2-204ENST00000428099 KIF21BO75037 1637 aa19.79■□□□□ 0.76
NFKB2-204ENST00000428099 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
NFKB2-204ENST00000428099 NOP58Q9Y2X3 529 aaKnown RBP19.76■□□□□ 0.75
NFKB2-204ENST00000428099 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
NFKB2-204ENST00000428099 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms