RNA–Protein interactions for RNA: ENST00000428099.5

NFKB2-204, Transcript of nuclear factor kappa B subunit 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NFKB2, Length 3,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2-204ENST00000428099 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
NFKB2-204ENST00000428099 HRCP23327 699 aa24.12■■□□□ 1.45
NFKB2-204ENST00000428099 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
NFKB2-204ENST00000428099 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
NFKB2-204ENST00000428099 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
NFKB2-204ENST00000428099 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
NFKB2-204ENST00000428099 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
NFKB2-204ENST00000428099 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
NFKB2-204ENST00000428099 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
NFKB2-204ENST00000428099 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
NFKB2-204ENST00000428099 LOC105371045A0A1W2PR82 267 aa22.73■■□□□ 1.23
NFKB2-204ENST00000428099 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
NFKB2-204ENST00000428099 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
NFKB2-204ENST00000428099 MYT1Q01538 1121 aa22.63■■□□□ 1.21
NFKB2-204ENST00000428099 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
NFKB2-204ENST00000428099 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
NFKB2-204ENST00000428099 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
NFKB2-204ENST00000428099 ACIN1Q9UKV3 1341 aaKnown RBP22.34■■□□□ 1.17
NFKB2-204ENST00000428099 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
NFKB2-204ENST00000428099 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
NFKB2-204ENST00000428099 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
NFKB2-204ENST00000428099 CENPBP07199 599 aaPredicted RBP22.07■■□□□ 1.12
NFKB2-204ENST00000428099 EHMT2Q96KQ7 1210 aa21.93■■□□□ 1.1
NFKB2-204ENST00000428099 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
NFKB2-204ENST00000428099 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
NFKB2-204ENST00000428099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
NFKB2-204ENST00000428099 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
NFKB2-204ENST00000428099 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
NFKB2-204ENST00000428099 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
NFKB2-204ENST00000428099 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
NFKB2-204ENST00000428099 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
NFKB2-204ENST00000428099 MIER1Q8N108 512 aa21.32■■□□□ 1
NFKB2-204ENST00000428099 BCL11AQ9H165 835 aa21.32■■□□□ 1
NFKB2-204ENST00000428099 ABCC9O60706 1549 aa21.18■□□□□ 0.98
NFKB2-204ENST00000428099 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
NFKB2-204ENST00000428099 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
NFKB2-204ENST00000428099 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
NFKB2-204ENST00000428099 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
NFKB2-204ENST00000428099 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
NFKB2-204ENST00000428099 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
NFKB2-204ENST00000428099 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
NFKB2-204ENST00000428099 HNRNPUL2Q1KMD3 747 aaKnown RBP20.85■□□□□ 0.93
NFKB2-204ENST00000428099 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.93
NFKB2-204ENST00000428099 BCANQ96GW7 911 aa20.78■□□□□ 0.92
NFKB2-204ENST00000428099 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
NFKB2-204ENST00000428099 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
NFKB2-204ENST00000428099 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
NFKB2-204ENST00000428099 FKBP8Q14318 412 aa20.55■□□□□ 0.88
NFKB2-204ENST00000428099 PRKCSHP14314 528 aaPredicted RBP20.54■□□□□ 0.88
NFKB2-204ENST00000428099 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
NFKB2-204ENST00000428099 NACADO15069 1562 aa20.52■□□□□ 0.87
NFKB2-204ENST00000428099 KCNH8Q96L42 1107 aa20.49■□□□□ 0.87
NFKB2-204ENST00000428099 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
NFKB2-204ENST00000428099 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
NFKB2-204ENST00000428099 ITGAEP38570 1179 aa20.43■□□□□ 0.86
NFKB2-204ENST00000428099 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
NFKB2-204ENST00000428099 PABPN1Q86U42 306 aaKnown RBP eCLIP20.4■□□□□ 0.863e-6■■□□□ 13.3
NFKB2-204ENST00000428099 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
NFKB2-204ENST00000428099 SOGA1O94964 1423 aa20.38■□□□□ 0.85
NFKB2-204ENST00000428099 NEFLP07196 543 aa20.37■□□□□ 0.85
NFKB2-204ENST00000428099 WIZO95785 1651 aa20.36■□□□□ 0.85
NFKB2-204ENST00000428099 ABCC8Q09428 1581 aa20.36■□□□□ 0.85
NFKB2-204ENST00000428099 MSH5O43196 834 aa20.35■□□□□ 0.85
NFKB2-204ENST00000428099 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
NFKB2-204ENST00000428099 APLP2Q06481 763 aa20.34■□□□□ 0.85
NFKB2-204ENST00000428099 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
NFKB2-204ENST00000428099 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
NFKB2-204ENST00000428099 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
NFKB2-204ENST00000428099 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
NFKB2-204ENST00000428099 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
NFKB2-204ENST00000428099 GOLGA3Q08378 1498 aa20.17■□□□□ 0.82
NFKB2-204ENST00000428099 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
NFKB2-204ENST00000428099 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
NFKB2-204ENST00000428099 CLIP1P30622 1438 aa20.11■□□□□ 0.81
NFKB2-204ENST00000428099 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
NFKB2-204ENST00000428099 EEA1Q15075 1411 aa20.09■□□□□ 0.81
NFKB2-204ENST00000428099 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
NFKB2-204ENST00000428099 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
NFKB2-204ENST00000428099 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
NFKB2-204ENST00000428099 IRX6P78412 446 aaPredicted RBP20.04■□□□□ 0.8
NFKB2-204ENST00000428099 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
NFKB2-204ENST00000428099 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
NFKB2-204ENST00000428099 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
NFKB2-204ENST00000428099 NBR1Q14596 966 aa19.95■□□□□ 0.78
NFKB2-204ENST00000428099 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
NFKB2-204ENST00000428099 ANP32CO43423 234 aa19.9■□□□□ 0.78
NFKB2-204ENST00000428099 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
NFKB2-204ENST00000428099 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
NFKB2-204ENST00000428099 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
NFKB2-204ENST00000428099 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
NFKB2-204ENST00000428099 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.77
NFKB2-204ENST00000428099 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
NFKB2-204ENST00000428099 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
NFKB2-204ENST00000428099 CCDC136Q96JN2 1154 aa19.8■□□□□ 0.76
NFKB2-204ENST00000428099 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
NFKB2-204ENST00000428099 KIF21BO75037 1637 aa19.79■□□□□ 0.76
NFKB2-204ENST00000428099 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
NFKB2-204ENST00000428099 NOP58Q9Y2X3 529 aaKnown RBP19.76■□□□□ 0.75
NFKB2-204ENST00000428099 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
NFKB2-204ENST00000428099 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms