RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 NISCHQ9Y2I1 1504 aa39.57■■■■□ 3.92
HDAC10-202ENST00000349505 CCDC180Q9P1Z9 1646 aa34.29■■■■□ 3.08
HDAC10-202ENST00000349505 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
HDAC10-202ENST00000349505 DCAF1Q9Y4B6 1507 aa32.74■■■□□ 2.83
HDAC10-202ENST00000349505 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
HDAC10-202ENST00000349505 DCAF8L2P0C7V8 631 aa32.49■■■□□ 2.79
HDAC10-202ENST00000349505 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
HDAC10-202ENST00000349505 ABCC9O60706 1549 aa31.98■■■□□ 2.71
HDAC10-202ENST00000349505 NACADO15069 1562 aa31.83■■■□□ 2.69
HDAC10-202ENST00000349505 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
HDAC10-202ENST00000349505 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
HDAC10-202ENST00000349505 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
HDAC10-202ENST00000349505 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
HDAC10-202ENST00000349505 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.53
HDAC10-202ENST00000349505 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
HDAC10-202ENST00000349505 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
HDAC10-202ENST00000349505 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
HDAC10-202ENST00000349505 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
HDAC10-202ENST00000349505 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
HDAC10-202ENST00000349505 WIZO95785 1651 aa30.35■■■□□ 2.45
HDAC10-202ENST00000349505 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
HDAC10-202ENST00000349505 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.438e-8■■□□□ 13.3
HDAC10-202ENST00000349505 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
HDAC10-202ENST00000349505 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
HDAC10-202ENST00000349505 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
HDAC10-202ENST00000349505 CCDC88BA6NC98 1476 aa29.75■■■□□ 2.35
HDAC10-202ENST00000349505 EIF4G1Q04637 1599 aaKnown RBP29.74■■■□□ 2.35
HDAC10-202ENST00000349505 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.34
HDAC10-202ENST00000349505 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
HDAC10-202ENST00000349505 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
HDAC10-202ENST00000349505 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
HDAC10-202ENST00000349505 NCAPD3P42695 1498 aa29.38■■■□□ 2.29
HDAC10-202ENST00000349505 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
HDAC10-202ENST00000349505 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
HDAC10-202ENST00000349505 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
HDAC10-202ENST00000349505 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
HDAC10-202ENST00000349505 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
HDAC10-202ENST00000349505 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
HDAC10-202ENST00000349505 EEA1Q15075 1411 aa28.9■■■□□ 2.22
HDAC10-202ENST00000349505 CFTRP13569 1480 aa28.86■■■□□ 2.21
HDAC10-202ENST00000349505 SOGA1O94964 1423 aa28.83■■■□□ 2.21
HDAC10-202ENST00000349505 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
HDAC10-202ENST00000349505 PRDM2Q13029 1718 aa28.73■■■□□ 2.19
HDAC10-202ENST00000349505 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
HDAC10-202ENST00000349505 RUSC2Q8N2Y8 1516 aa28.68■■■□□ 2.18
HDAC10-202ENST00000349505 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
HDAC10-202ENST00000349505 EHMT2Q96KQ7 1210 aa28.67■■■□□ 2.18
HDAC10-202ENST00000349505 CADPSQ9ULU8 1353 aa28.66■■■□□ 2.18
HDAC10-202ENST00000349505 HRCP23327 699 aa28.59■■■□□ 2.17
HDAC10-202ENST00000349505 CUX1P39880 1505 aa28.56■■■□□ 2.16
HDAC10-202ENST00000349505 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.15
HDAC10-202ENST00000349505 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
HDAC10-202ENST00000349505 PCGF6Q9BYE7 350 aa28.49■■■□□ 2.15
HDAC10-202ENST00000349505 KIF21BO75037 1637 aa28.49■■■□□ 2.15
HDAC10-202ENST00000349505 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
HDAC10-202ENST00000349505 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
HDAC10-202ENST00000349505 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
HDAC10-202ENST00000349505 UBTFP17480 764 aaKnown RBP28.34■■■□□ 2.13
HDAC10-202ENST00000349505 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
HDAC10-202ENST00000349505 LAMC3Q9Y6N6 1575 aa28.3■■■□□ 2.12
HDAC10-202ENST00000349505 KIF27Q86VH2 1401 aa28.27■■■□□ 2.12
HDAC10-202ENST00000349505 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
HDAC10-202ENST00000349505 NESP48681 1621 aa28.23■■■□□ 2.11
HDAC10-202ENST00000349505 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
HDAC10-202ENST00000349505 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
HDAC10-202ENST00000349505 FGD5Q6ZNL6 1462 aa28.18■■■□□ 2.1
HDAC10-202ENST00000349505 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
HDAC10-202ENST00000349505 CUX2O14529 1486 aa28.08■■■□□ 2.09
HDAC10-202ENST00000349505 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
HDAC10-202ENST00000349505 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
HDAC10-202ENST00000349505 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
HDAC10-202ENST00000349505 CLIP1P30622 1438 aa28.06■■■□□ 2.08
HDAC10-202ENST00000349505 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
HDAC10-202ENST00000349505 IGF1RP08069 1367 aa27.97■■■□□ 2.07
HDAC10-202ENST00000349505 ABCA10Q8WWZ4 1543 aa27.95■■■□□ 2.07
HDAC10-202ENST00000349505 URB2Q14146 1524 aaKnown RBP27.95■■■□□ 2.06
HDAC10-202ENST00000349505 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
HDAC10-202ENST00000349505 VPS8Q8N3P4 1428 aa27.89■■■□□ 2.06
HDAC10-202ENST00000349505 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.06
HDAC10-202ENST00000349505 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
HDAC10-202ENST00000349505 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
HDAC10-202ENST00000349505 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
HDAC10-202ENST00000349505 ZEB1P37275 1124 aaPredicted RBP27.76■■■□□ 2.03
HDAC10-202ENST00000349505 CUL7Q14999 1698 aa27.73■■■□□ 2.03
HDAC10-202ENST00000349505 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
HDAC10-202ENST00000349505 RANGAP1P46060 587 aaPredicted RBP27.7■■■□□ 2.03
HDAC10-202ENST00000349505 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
HDAC10-202ENST00000349505 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
HDAC10-202ENST00000349505 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
HDAC10-202ENST00000349505 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
HDAC10-202ENST00000349505 APLP2Q06481 763 aa27.62■■■□□ 2.01
HDAC10-202ENST00000349505 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
HDAC10-202ENST00000349505 TDRD9Q8NDG6 1382 aaKnown RBP27.57■■■□□ 2
HDAC10-202ENST00000349505 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
HDAC10-202ENST00000349505 WDR62O43379 1518 aa27.52■■■□□ 2
HDAC10-202ENST00000349505 CTTNBP2Q8WZ74 1663 aa27.48■■□□□ 1.99
HDAC10-202ENST00000349505 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
HDAC10-202ENST00000349505 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
HDAC10-202ENST00000349505 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
HDAC10-202ENST00000349505 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms