RNA–Protein interactions for RNA: ENST00000329276.9

NOP56-201, Transcript of NOP56 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOP56, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-201ENST00000329276 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
NOP56-201ENST00000329276 HRCP23327 699 aa32.53■■■□□ 2.8
NOP56-201ENST00000329276 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
NOP56-201ENST00000329276 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
NOP56-201ENST00000329276 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
NOP56-201ENST00000329276 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
NOP56-201ENST00000329276 CHIC1Q5VXU3 224 aa31.8■■■□□ 2.68
NOP56-201ENST00000329276 ZCCHC6Q5VYS8 1495 aaKnown RBP31.76■■■□□ 2.67
NOP56-201ENST00000329276 PCGF6Q9BYE7 350 aa31.75■■■□□ 2.67
NOP56-201ENST00000329276 DCAF1Q9Y4B6 1507 aa31.55■■■□□ 2.64
NOP56-201ENST00000329276 PPARGC1BQ86YN6 1023 aaKnown RBP31.49■■■□□ 2.63
NOP56-201ENST00000329276 PELP1Q8IZL8 1130 aaKnown RBP31.44■■■□□ 2.62
NOP56-201ENST00000329276 TRIM26Q12899 539 aaPredicted RBP31.05■■■□□ 2.56
NOP56-201ENST00000329276 ZEB1P37275 1124 aaPredicted RBP30.92■■■□□ 2.54
NOP56-201ENST00000329276 DCAF8L2P0C7V8 631 aa30.92■■■□□ 2.54
NOP56-201ENST00000329276 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
NOP56-201ENST00000329276 ABCC9O60706 1549 aa30.58■■■□□ 2.49
NOP56-201ENST00000329276 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
NOP56-201ENST00000329276 MYT1Q01538 1121 aa30.29■■■□□ 2.44
NOP56-201ENST00000329276 ACIN1Q9UKV3 1341 aaKnown RBP29.97■■■□□ 2.39
NOP56-201ENST00000329276 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
NOP56-201ENST00000329276 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
NOP56-201ENST00000329276 RB1CC1Q8TDY2 1594 aa29.76■■■□□ 2.35
NOP56-201ENST00000329276 NACADO15069 1562 aa29.75■■■□□ 2.35
NOP56-201ENST00000329276 NEUROD1Q13562 356 aa29.74■■■□□ 2.35
NOP56-201ENST00000329276 CENPBP07199 599 aaPredicted RBP29.73■■■□□ 2.35
NOP56-201ENST00000329276 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
NOP56-201ENST00000329276 FAM9AQ8IZU1 332 aaPredicted RBP29.62■■■□□ 2.33
NOP56-201ENST00000329276 GTF3C3Q9Y5Q9 886 aa29.59■■■□□ 2.33
NOP56-201ENST00000329276 CCER1Q8TC90 406 aaPredicted RBP29.54■■■□□ 2.32
NOP56-201ENST00000329276 DIEXFQ68CQ4 756 aaKnown RBP29.53■■■□□ 2.32
NOP56-201ENST00000329276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.46■■■□□ 2.31
NOP56-201ENST00000329276 EHMT2Q96KQ7 1210 aa29.24■■■□□ 2.27
NOP56-201ENST00000329276 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
NOP56-201ENST00000329276 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.25
NOP56-201ENST00000329276 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
NOP56-201ENST00000329276 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.231e-6■■□□□ 13.3
NOP56-201ENST00000329276 EIF4G1Q04637 1599 aaKnown RBP29■■■□□ 2.23
NOP56-201ENST00000329276 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
NOP56-201ENST00000329276 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
NOP56-201ENST00000329276 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.21
NOP56-201ENST00000329276 WIZO95785 1651 aa28.88■■■□□ 2.21
NOP56-201ENST00000329276 CEP162Q5TB80 1403 aa28.87■■■□□ 2.21
NOP56-201ENST00000329276 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
NOP56-201ENST00000329276 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
NOP56-201ENST00000329276 YTHDC1Q96MU7 727 aaKnown RBP28.75■■■□□ 2.19
NOP56-201ENST00000329276 CLSPNQ9HAW4 1339 aa28.7■■■□□ 2.19
NOP56-201ENST00000329276 MIER1Q8N108 512 aa28.7■■■□□ 2.18
NOP56-201ENST00000329276 EEA1Q15075 1411 aa28.69■■■□□ 2.18
NOP56-201ENST00000329276 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
NOP56-201ENST00000329276 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
NOP56-201ENST00000329276 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
NOP56-201ENST00000329276 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
NOP56-201ENST00000329276 SOGA1O94964 1423 aa28.47■■■□□ 2.15
NOP56-201ENST00000329276 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
NOP56-201ENST00000329276 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
NOP56-201ENST00000329276 UBTFP17480 764 aaKnown RBP28.38■■■□□ 2.13
NOP56-201ENST00000329276 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
NOP56-201ENST00000329276 SUPT16HQ9Y5B9 1047 aaKnown RBP28.3■■■□□ 2.12
NOP56-201ENST00000329276 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
NOP56-201ENST00000329276 SMARCA4P51532 1647 aa28.27■■■□□ 2.12
NOP56-201ENST00000329276 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
NOP56-201ENST00000329276 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
NOP56-201ENST00000329276 KIF21BO75037 1637 aa28.21■■■□□ 2.11
NOP56-201ENST00000329276 ANP32EQ9BTT0 268 aa28.2■■■□□ 2.1
NOP56-201ENST00000329276 VPS8Q8N3P4 1428 aa28.18■■■□□ 2.1
NOP56-201ENST00000329276 CLIP1P30622 1438 aa28.13■■■□□ 2.09
NOP56-201ENST00000329276 TSHZ2Q9NRE2 1034 aa28.1■■■□□ 2.09
NOP56-201ENST00000329276 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
NOP56-201ENST00000329276 APLP2Q06481 763 aa28.04■■■□□ 2.08
NOP56-201ENST00000329276 BCL11AQ9H165 835 aa28■■■□□ 2.07
NOP56-201ENST00000329276 DHX57Q6P158 1386 aaKnown RBP27.98■■■□□ 2.07
NOP56-201ENST00000329276 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
NOP56-201ENST00000329276 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
NOP56-201ENST00000329276 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
NOP56-201ENST00000329276 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.04
NOP56-201ENST00000329276 CUX2O14529 1486 aa27.75■■■□□ 2.03
NOP56-201ENST00000329276 RRBP1Q9P2E9 1410 aaKnown RBP27.69■■■□□ 2.02
NOP56-201ENST00000329276 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
NOP56-201ENST00000329276 ARAP1Q96P48 1450 aa27.56■■■□□ 2
NOP56-201ENST00000329276 NCAPD3P42695 1498 aa27.53■■■□□ 2
NOP56-201ENST00000329276 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
NOP56-201ENST00000329276 FKBP8Q14318 412 aa27.52■■■□□ 2
NOP56-201ENST00000329276 TOP2BQ02880 1626 aa27.48■■□□□ 1.99
NOP56-201ENST00000329276 NEFLP07196 543 aa27.47■■□□□ 1.99
NOP56-201ENST00000329276 RBM19Q9Y4C8 960 aaKnown RBP27.47■■□□□ 1.99
NOP56-201ENST00000329276 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
NOP56-201ENST00000329276 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
NOP56-201ENST00000329276 PRXQ9BXM0 1461 aa27.46■■□□□ 1.99
NOP56-201ENST00000329276 BCANQ96GW7 911 aa27.45■■□□□ 1.98
NOP56-201ENST00000329276 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.98
NOP56-201ENST00000329276 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
NOP56-201ENST00000329276 RANGAP1P46060 587 aaPredicted RBP27.4■■□□□ 1.98
NOP56-201ENST00000329276 MAPKBP1O60336 1514 aa27.39■■□□□ 1.98
NOP56-201ENST00000329276 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
NOP56-201ENST00000329276 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
NOP56-201ENST00000329276 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
NOP56-201ENST00000329276 TIMELESSQ9UNS1 1208 aa27.28■■□□□ 1.96
NOP56-201ENST00000329276 PPP1R15AO75807 674 aaPredicted RBP27.26■■□□□ 1.95
NOP56-201ENST00000329276 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms