RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
PTK7-202ENST00000230419 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
PTK7-202ENST00000230419 SHROOM4Q9ULL8 1493 aa29.41■■■□□ 2.3
PTK7-202ENST00000230419 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
PTK7-202ENST00000230419 EHMT2Q96KQ7 1210 aa28.11■■■□□ 2.09
PTK7-202ENST00000230419 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
PTK7-202ENST00000230419 PCGF6Q9BYE7 350 aa27.19■■□□□ 1.94
PTK7-202ENST00000230419 TTBK1Q5TCY1 1321 aaPredicted RBP27.01■■□□□ 1.91
PTK7-202ENST00000230419 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.89
PTK7-202ENST00000230419 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
PTK7-202ENST00000230419 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
PTK7-202ENST00000230419 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
PTK7-202ENST00000230419 RANGAP1P46060 587 aaPredicted RBP26.59■■□□□ 1.85
PTK7-202ENST00000230419 ABCC9O60706 1549 aa26.41■■□□□ 1.82
PTK7-202ENST00000230419 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.778e-8■■□□□ 13.3
PTK7-202ENST00000230419 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
PTK7-202ENST00000230419 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
PTK7-202ENST00000230419 HRCP23327 699 aa25.99■■□□□ 1.75
PTK7-202ENST00000230419 APLP2Q06481 763 aa25.94■■□□□ 1.74
PTK7-202ENST00000230419 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
PTK7-202ENST00000230419 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
PTK7-202ENST00000230419 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
PTK7-202ENST00000230419 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
PTK7-202ENST00000230419 ATP1B4Q9UN42 357 aaPredicted RBP25.66■■□□□ 1.7
PTK7-202ENST00000230419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
PTK7-202ENST00000230419 ZEB1P37275 1124 aaPredicted RBP25.56■■□□□ 1.68
PTK7-202ENST00000230419 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
PTK7-202ENST00000230419 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.67
PTK7-202ENST00000230419 ITGAEP38570 1179 aa25.38■■□□□ 1.65
PTK7-202ENST00000230419 YTHDC1Q96MU7 727 aaKnown RBP25.34■■□□□ 1.65
PTK7-202ENST00000230419 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
PTK7-202ENST00000230419 CENPBP07199 599 aaPredicted RBP25.06■■□□□ 1.6
PTK7-202ENST00000230419 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
PTK7-202ENST00000230419 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
PTK7-202ENST00000230419 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
PTK7-202ENST00000230419 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
PTK7-202ENST00000230419 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.54
PTK7-202ENST00000230419 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
PTK7-202ENST00000230419 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
PTK7-202ENST00000230419 MROH2BQ7Z745 1585 aa24.6■■□□□ 1.53
PTK7-202ENST00000230419 CNGB1Q14028 1251 aaPredicted RBP24.6■■□□□ 1.53
PTK7-202ENST00000230419 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
PTK7-202ENST00000230419 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
PTK7-202ENST00000230419 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
PTK7-202ENST00000230419 NACADO15069 1562 aa24.42■■□□□ 1.5
PTK7-202ENST00000230419 SOGA1O94964 1423 aa24.39■■□□□ 1.49
PTK7-202ENST00000230419 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
PTK7-202ENST00000230419 GTF3C3Q9Y5Q9 886 aa24.33■■□□□ 1.49
PTK7-202ENST00000230419 POLR3GLQ9BT43 218 aa24.32■■□□□ 1.48
PTK7-202ENST00000230419 WIZO95785 1651 aa24.31■■□□□ 1.48
PTK7-202ENST00000230419 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
PTK7-202ENST00000230419 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
PTK7-202ENST00000230419 FBLN2P98095 1184 aa24.25■■□□□ 1.47
PTK7-202ENST00000230419 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
PTK7-202ENST00000230419 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
PTK7-202ENST00000230419 NEFLP07196 543 aa24.15■■□□□ 1.46
PTK7-202ENST00000230419 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
PTK7-202ENST00000230419 CLIP1P30622 1438 aa24.12■■□□□ 1.45
PTK7-202ENST00000230419 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
PTK7-202ENST00000230419 HIRIP3Q9BW71 556 aaPredicted RBP24.08■■□□□ 1.45
PTK7-202ENST00000230419 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
PTK7-202ENST00000230419 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
PTK7-202ENST00000230419 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
PTK7-202ENST00000230419 BCANQ96GW7 911 aa24.01■■□□□ 1.43
PTK7-202ENST00000230419 SCAF1Q9H7N4 1312 aaKnown RBP23.97■■□□□ 1.43
PTK7-202ENST00000230419 MIER1Q8N108 512 aa23.96■■□□□ 1.43
PTK7-202ENST00000230419 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
PTK7-202ENST00000230419 CHIC2Q9UKJ5 165 aa23.94■■□□□ 1.42
PTK7-202ENST00000230419 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
PTK7-202ENST00000230419 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
PTK7-202ENST00000230419 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
PTK7-202ENST00000230419 ZNF777Q9ULD5 760 aaPredicted RBP23.85■■□□□ 1.41
PTK7-202ENST00000230419 KANK4Q5T7N3 995 aaPredicted RBP23.85■■□□□ 1.41
PTK7-202ENST00000230419 ERICH6Q7L0X2 663 aa23.83■■□□□ 1.4
PTK7-202ENST00000230419 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
PTK7-202ENST00000230419 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
PTK7-202ENST00000230419 EEA1Q15075 1411 aa23.7■■□□□ 1.38
PTK7-202ENST00000230419 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
PTK7-202ENST00000230419 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
PTK7-202ENST00000230419 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
PTK7-202ENST00000230419 ANP32CO43423 234 aa23.65■■□□□ 1.38
PTK7-202ENST00000230419 SMARCA4P51532 1647 aa23.64■■□□□ 1.37
PTK7-202ENST00000230419 SENP3-EIF4A1A0A087X0R7 540 aa23.62■■□□□ 1.37
PTK7-202ENST00000230419 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
PTK7-202ENST00000230419 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
PTK7-202ENST00000230419 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
PTK7-202ENST00000230419 CUX2O14529 1486 aa23.56■■□□□ 1.36
PTK7-202ENST00000230419 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
PTK7-202ENST00000230419 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
PTK7-202ENST00000230419 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
PTK7-202ENST00000230419 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
PTK7-202ENST00000230419 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
PTK7-202ENST00000230419 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
PTK7-202ENST00000230419 FKBP8Q14318 412 aa23.39■■□□□ 1.33
PTK7-202ENST00000230419 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
PTK7-202ENST00000230419 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
PTK7-202ENST00000230419 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
PTK7-202ENST00000230419 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
PTK7-202ENST00000230419 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
PTK7-202ENST00000230419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.325e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms