RNA–Protein interactions for RNA: ENST00000189444.10

NFKB2-201, Transcript of nuclear factor kappa B subunit 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NFKB2, Length 3,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2-201ENST00000189444 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
NFKB2-201ENST00000189444 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
NFKB2-201ENST00000189444 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
NFKB2-201ENST00000189444 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
NFKB2-201ENST00000189444 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
NFKB2-201ENST00000189444 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
NFKB2-201ENST00000189444 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
NFKB2-201ENST00000189444 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
NFKB2-201ENST00000189444 PCGF6Q9BYE7 350 aa30.24■■■□□ 2.43
NFKB2-201ENST00000189444 HRCP23327 699 aa30.14■■■□□ 2.42
NFKB2-201ENST00000189444 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.39
NFKB2-201ENST00000189444 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
NFKB2-201ENST00000189444 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
NFKB2-201ENST00000189444 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
NFKB2-201ENST00000189444 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.3
NFKB2-201ENST00000189444 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
NFKB2-201ENST00000189444 ABCC9O60706 1549 aa29.29■■■□□ 2.28
NFKB2-201ENST00000189444 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
NFKB2-201ENST00000189444 TRIM41Q8WV44 630 aa29.26■■■□□ 2.28
NFKB2-201ENST00000189444 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
NFKB2-201ENST00000189444 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
NFKB2-201ENST00000189444 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
NFKB2-201ENST00000189444 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
NFKB2-201ENST00000189444 ZEB1P37275 1124 aaPredicted RBP28.59■■■□□ 2.17
NFKB2-201ENST00000189444 WIZO95785 1651 aa28.55■■■□□ 2.16
NFKB2-201ENST00000189444 TTBK1Q5TCY1 1321 aaPredicted RBP28.5■■■□□ 2.15
NFKB2-201ENST00000189444 NACADO15069 1562 aa28.45■■■□□ 2.14
NFKB2-201ENST00000189444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
NFKB2-201ENST00000189444 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
NFKB2-201ENST00000189444 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
NFKB2-201ENST00000189444 BAZ1AQ9NRL2 1556 aaPredicted RBP28.15■■■□□ 2.1
NFKB2-201ENST00000189444 SCAF1Q9H7N4 1312 aaKnown RBP28.1■■■□□ 2.09
NFKB2-201ENST00000189444 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
NFKB2-201ENST00000189444 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
NFKB2-201ENST00000189444 SOGA1O94964 1423 aa27.95■■■□□ 2.06
NFKB2-201ENST00000189444 UBTFP17480 764 aaKnown RBP27.94■■■□□ 2.06
NFKB2-201ENST00000189444 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.063e-6■■□□□ 13.3
NFKB2-201ENST00000189444 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
NFKB2-201ENST00000189444 CEP162Q5TB80 1403 aa27.87■■■□□ 2.05
NFKB2-201ENST00000189444 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
NFKB2-201ENST00000189444 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
NFKB2-201ENST00000189444 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
NFKB2-201ENST00000189444 CSRNP3Q8WYN3 585 aa27.77■■■□□ 2.04
NFKB2-201ENST00000189444 DIEXFQ68CQ4 756 aaKnown RBP27.75■■■□□ 2.03
NFKB2-201ENST00000189444 NEUROD1Q13562 356 aa27.71■■■□□ 2.03
NFKB2-201ENST00000189444 RANGAP1P46060 587 aaPredicted RBP27.7■■■□□ 2.03
NFKB2-201ENST00000189444 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
NFKB2-201ENST00000189444 TNIKQ9UKE5 1360 aa27.65■■■□□ 2.02
NFKB2-201ENST00000189444 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
NFKB2-201ENST00000189444 ACIN1Q9UKV3 1341 aaKnown RBP27.63■■■□□ 2.01
NFKB2-201ENST00000189444 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
NFKB2-201ENST00000189444 GTF3C3Q9Y5Q9 886 aa27.49■■□□□ 1.99
NFKB2-201ENST00000189444 GOLGA3Q08378 1498 aa27.47■■□□□ 1.99
NFKB2-201ENST00000189444 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
NFKB2-201ENST00000189444 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
NFKB2-201ENST00000189444 EEA1Q15075 1411 aa27.44■■□□□ 1.98
NFKB2-201ENST00000189444 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
NFKB2-201ENST00000189444 ZNF316A6NFI3 1004 aaPredicted RBP27.36■■□□□ 1.97
NFKB2-201ENST00000189444 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
NFKB2-201ENST00000189444 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
NFKB2-201ENST00000189444 APLP2Q06481 763 aa27.3■■□□□ 1.96
NFKB2-201ENST00000189444 CLIP1P30622 1438 aa27.3■■□□□ 1.96
NFKB2-201ENST00000189444 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
NFKB2-201ENST00000189444 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
NFKB2-201ENST00000189444 MIER1Q8N108 512 aa27.17■■□□□ 1.94
NFKB2-201ENST00000189444 BAZ1BQ9UIG0 1483 aaKnown RBP27.14■■□□□ 1.94
NFKB2-201ENST00000189444 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
NFKB2-201ENST00000189444 VPS8Q8N3P4 1428 aa27.1■■□□□ 1.93
NFKB2-201ENST00000189444 KIF21BO75037 1637 aa27.07■■□□□ 1.92
NFKB2-201ENST00000189444 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
NFKB2-201ENST00000189444 KANK4Q5T7N3 995 aaPredicted RBP26.91■■□□□ 1.9
NFKB2-201ENST00000189444 ITGAEP38570 1179 aa26.89■■□□□ 1.9
NFKB2-201ENST00000189444 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
NFKB2-201ENST00000189444 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
NFKB2-201ENST00000189444 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
NFKB2-201ENST00000189444 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
NFKB2-201ENST00000189444 CUX1P39880 1505 aa26.62■■□□□ 1.85
NFKB2-201ENST00000189444 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
NFKB2-201ENST00000189444 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
NFKB2-201ENST00000189444 ERICH3Q5RHP9 1530 aa26.56■■□□□ 1.84
NFKB2-201ENST00000189444 ATP1B4Q9UN42 357 aaPredicted RBP26.52■■□□□ 1.84
NFKB2-201ENST00000189444 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
NFKB2-201ENST00000189444 P3H3Q8IVL6 736 aa26.48■■□□□ 1.83
NFKB2-201ENST00000189444 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
NFKB2-201ENST00000189444 CLSPNQ9HAW4 1339 aa26.46■■□□□ 1.83
NFKB2-201ENST00000189444 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
NFKB2-201ENST00000189444 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
NFKB2-201ENST00000189444 FAM50AQ14320 339 aaKnown RBP26.39■■□□□ 1.82
NFKB2-201ENST00000189444 CUX2O14529 1486 aa26.39■■□□□ 1.82
NFKB2-201ENST00000189444 KCNH8Q96L42 1107 aa26.39■■□□□ 1.81
NFKB2-201ENST00000189444 RAB3GAP2Q9H2M9 1393 aa26.35■■□□□ 1.81
NFKB2-201ENST00000189444 CFTRP13569 1480 aa26.35■■□□□ 1.81
NFKB2-201ENST00000189444 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
NFKB2-201ENST00000189444 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
NFKB2-201ENST00000189444 SUPT16HQ9Y5B9 1047 aaKnown RBP26.3■■□□□ 1.8
NFKB2-201ENST00000189444 IGF1RP08069 1367 aa26.3■■□□□ 1.8
NFKB2-201ENST00000189444 HIRIP3Q9BW71 556 aaPredicted RBP26.28■■□□□ 1.8
NFKB2-201ENST00000189444 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
NFKB2-201ENST00000189444 DDX10Q13206 875 aaKnown RBP26.22■■□□□ 1.79
NFKB2-201ENST00000189444 PHLDB1Q86UU1 1377 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms