RNA–Protein interactions for RNA: ENST00000483753.1

PLXNB1-216, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-216ENST00000483753 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
PLXNB1-216ENST00000483753 ABCC9O60706 1549 aa28.01■■■□□ 2.07
PLXNB1-216ENST00000483753 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
PLXNB1-216ENST00000483753 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
PLXNB1-216ENST00000483753 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
PLXNB1-216ENST00000483753 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.749e-13■■□□□ 13.3
PLXNB1-216ENST00000483753 NACADO15069 1562 aa25.88■■□□□ 1.73
PLXNB1-216ENST00000483753 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
PLXNB1-216ENST00000483753 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
PLXNB1-216ENST00000483753 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
PLXNB1-216ENST00000483753 DCAF8L2P0C7V8 631 aa25.42■■□□□ 1.66
PLXNB1-216ENST00000483753 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
PLXNB1-216ENST00000483753 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
PLXNB1-216ENST00000483753 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
PLXNB1-216ENST00000483753 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
PLXNB1-216ENST00000483753 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
PLXNB1-216ENST00000483753 CUX2O14529 1486 aa24.6■■□□□ 1.53
PLXNB1-216ENST00000483753 SCRIBQ14160 1630 aa24.56■■□□□ 1.52
PLXNB1-216ENST00000483753 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
PLXNB1-216ENST00000483753 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
PLXNB1-216ENST00000483753 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
PLXNB1-216ENST00000483753 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
PLXNB1-216ENST00000483753 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
PLXNB1-216ENST00000483753 NESP48681 1621 aa23.8■■□□□ 1.4
PLXNB1-216ENST00000483753 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
PLXNB1-216ENST00000483753 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
PLXNB1-216ENST00000483753 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
PLXNB1-216ENST00000483753 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
PLXNB1-216ENST00000483753 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
PLXNB1-216ENST00000483753 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
PLXNB1-216ENST00000483753 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
PLXNB1-216ENST00000483753 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
PLXNB1-216ENST00000483753 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
PLXNB1-216ENST00000483753 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
PLXNB1-216ENST00000483753 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
PLXNB1-216ENST00000483753 WDR62O43379 1518 aa23.24■■□□□ 1.31
PLXNB1-216ENST00000483753 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PLXNB1-216ENST00000483753 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
PLXNB1-216ENST00000483753 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
PLXNB1-216ENST00000483753 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.29
PLXNB1-216ENST00000483753 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.29
PLXNB1-216ENST00000483753 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.29
PLXNB1-216ENST00000483753 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
PLXNB1-216ENST00000483753 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
PLXNB1-216ENST00000483753 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
PLXNB1-216ENST00000483753 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
PLXNB1-216ENST00000483753 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
PLXNB1-216ENST00000483753 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
PLXNB1-216ENST00000483753 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
PLXNB1-216ENST00000483753 URB2Q14146 1524 aaKnown RBP22.72■■□□□ 1.23
PLXNB1-216ENST00000483753 CFTRP13569 1480 aa22.67■■□□□ 1.22
PLXNB1-216ENST00000483753 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
PLXNB1-216ENST00000483753 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
PLXNB1-216ENST00000483753 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
PLXNB1-216ENST00000483753 WIZO95785 1651 aa22.54■■□□□ 1.2
PLXNB1-216ENST00000483753 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
PLXNB1-216ENST00000483753 CHD1O14646 1710 aa22.4■■□□□ 1.18
PLXNB1-216ENST00000483753 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
PLXNB1-216ENST00000483753 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
PLXNB1-216ENST00000483753 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
PLXNB1-216ENST00000483753 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.151e-9■■■■■ 26.9
PLXNB1-216ENST00000483753 FBLN2P98095 1184 aa22.25■■□□□ 1.15
PLXNB1-216ENST00000483753 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
PLXNB1-216ENST00000483753 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
PLXNB1-216ENST00000483753 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
PLXNB1-216ENST00000483753 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
PLXNB1-216ENST00000483753 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
PLXNB1-216ENST00000483753 ILDR1Q86SU0 546 aaPredicted RBP22.09■■□□□ 1.13
PLXNB1-216ENST00000483753 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
PLXNB1-216ENST00000483753 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
PLXNB1-216ENST00000483753 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
PLXNB1-216ENST00000483753 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
PLXNB1-216ENST00000483753 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
PLXNB1-216ENST00000483753 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
PLXNB1-216ENST00000483753 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
PLXNB1-216ENST00000483753 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
PLXNB1-216ENST00000483753 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
PLXNB1-216ENST00000483753 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PLXNB1-216ENST00000483753 SOGA1O94964 1423 aa21.89■■□□□ 1.09
PLXNB1-216ENST00000483753 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
PLXNB1-216ENST00000483753 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
PLXNB1-216ENST00000483753 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
PLXNB1-216ENST00000483753 KDM4FA0A1W2PPD8 638 aa21.77■■□□□ 1.08
PLXNB1-216ENST00000483753 ERCC6L2Q5T890 1561 aa21.73■■□□□ 1.07
PLXNB1-216ENST00000483753 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
PLXNB1-216ENST00000483753 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
PLXNB1-216ENST00000483753 CEP170Q5SW79 1584 aa21.61■■□□□ 1.05
PLXNB1-216ENST00000483753 ABCC10Q5T3U5 1492 aa21.56■■□□□ 1.04
PLXNB1-216ENST00000483753 CUX1P39880 1505 aa21.55■■□□□ 1.04
PLXNB1-216ENST00000483753 FAM69CQ0P6D2 419 aa21.55■■□□□ 1.04
PLXNB1-216ENST00000483753 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
PLXNB1-216ENST00000483753 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
PLXNB1-216ENST00000483753 NUP160Q12769 1436 aa21.53■■□□□ 1.04
PLXNB1-216ENST00000483753 KDM6BO15054 1643 aa21.5■■□□□ 1.03
PLXNB1-216ENST00000483753 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
PLXNB1-216ENST00000483753 DIP2BQ9P265 1576 aa21.45■■□□□ 1.02
PLXNB1-216ENST00000483753 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
PLXNB1-216ENST00000483753 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PLXNB1-216ENST00000483753 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
PLXNB1-216ENST00000483753 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms