RNA–Protein interactions for RNA: ENST00000357324.10

ATP13A1-202, Transcript of ATPase 13A1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-202ENST00000357324 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
ATP13A1-202ENST00000357324 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
ATP13A1-202ENST00000357324 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
ATP13A1-202ENST00000357324 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
ATP13A1-202ENST00000357324 PCGF6Q9BYE7 350 aa23.57■■□□□ 1.36
ATP13A1-202ENST00000357324 EHMT2Q96KQ7 1210 aa23.39■■□□□ 1.33
ATP13A1-202ENST00000357324 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
ATP13A1-202ENST00000357324 HRCP23327 699 aa23.05■■□□□ 1.28
ATP13A1-202ENST00000357324 LOC105371045A0A1W2PR82 267 aa22.98■■□□□ 1.27
ATP13A1-202ENST00000357324 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
ATP13A1-202ENST00000357324 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
ATP13A1-202ENST00000357324 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
ATP13A1-202ENST00000357324 MYO15BQ96JP2 1530 aa22.52■■□□□ 1.2
ATP13A1-202ENST00000357324 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
ATP13A1-202ENST00000357324 TRIM26Q12899 539 aaPredicted RBP22.32■■□□□ 1.16
ATP13A1-202ENST00000357324 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
ATP13A1-202ENST00000357324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
ATP13A1-202ENST00000357324 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
ATP13A1-202ENST00000357324 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
ATP13A1-202ENST00000357324 YTHDC1Q96MU7 727 aaKnown RBP21.88■■□□□ 1.09
ATP13A1-202ENST00000357324 RANGAP1P46060 587 aaPredicted RBP21.86■■□□□ 1.09
ATP13A1-202ENST00000357324 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
ATP13A1-202ENST00000357324 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
ATP13A1-202ENST00000357324 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
ATP13A1-202ENST00000357324 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.04
ATP13A1-202ENST00000357324 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
ATP13A1-202ENST00000357324 GTF3C3Q9Y5Q9 886 aa21.52■■□□□ 1.04
ATP13A1-202ENST00000357324 DIEXFQ68CQ4 756 aaKnown RBP21.52■■□□□ 1.03
ATP13A1-202ENST00000357324 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
ATP13A1-202ENST00000357324 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
ATP13A1-202ENST00000357324 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
ATP13A1-202ENST00000357324 APLP2Q06481 763 aa21.3■■□□□ 1
ATP13A1-202ENST00000357324 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
ATP13A1-202ENST00000357324 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
ATP13A1-202ENST00000357324 ABCC9O60706 1549 aa21.13■□□□□ 0.97
ATP13A1-202ENST00000357324 ITGAEP38570 1179 aa21.09■□□□□ 0.97
ATP13A1-202ENST00000357324 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
ATP13A1-202ENST00000357324 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
ATP13A1-202ENST00000357324 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.943e-7■■□□□ 13.3
ATP13A1-202ENST00000357324 MIER1Q8N108 512 aa20.92■□□□□ 0.94
ATP13A1-202ENST00000357324 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
ATP13A1-202ENST00000357324 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
ATP13A1-202ENST00000357324 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
ATP13A1-202ENST00000357324 BCANQ96GW7 911 aa20.82■□□□□ 0.92
ATP13A1-202ENST00000357324 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
ATP13A1-202ENST00000357324 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
ATP13A1-202ENST00000357324 SOGA1O94964 1423 aa20.58■□□□□ 0.89
ATP13A1-202ENST00000357324 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
ATP13A1-202ENST00000357324 MYT1Q01538 1121 aa20.53■□□□□ 0.88
ATP13A1-202ENST00000357324 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
ATP13A1-202ENST00000357324 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
ATP13A1-202ENST00000357324 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
ATP13A1-202ENST00000357324 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
ATP13A1-202ENST00000357324 NEFLP07196 543 aa20.4■□□□□ 0.86
ATP13A1-202ENST00000357324 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
ATP13A1-202ENST00000357324 WIZO95785 1651 aa20.39■□□□□ 0.86
ATP13A1-202ENST00000357324 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
ATP13A1-202ENST00000357324 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
ATP13A1-202ENST00000357324 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
ATP13A1-202ENST00000357324 FKBP8Q14318 412 aa20.3■□□□□ 0.84
ATP13A1-202ENST00000357324 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
ATP13A1-202ENST00000357324 CLIP1P30622 1438 aa20.29■□□□□ 0.84
ATP13A1-202ENST00000357324 TNIKQ9UKE5 1360 aa20.29■□□□□ 0.84
ATP13A1-202ENST00000357324 KCNH8Q96L42 1107 aa20.25■□□□□ 0.83
ATP13A1-202ENST00000357324 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
ATP13A1-202ENST00000357324 SUPT16HQ9Y5B9 1047 aaKnown RBP20.23■□□□□ 0.83
ATP13A1-202ENST00000357324 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
ATP13A1-202ENST00000357324 POLR3GLQ9BT43 218 aa20.16■□□□□ 0.82
ATP13A1-202ENST00000357324 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
ATP13A1-202ENST00000357324 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
ATP13A1-202ENST00000357324 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
ATP13A1-202ENST00000357324 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
ATP13A1-202ENST00000357324 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
ATP13A1-202ENST00000357324 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
ATP13A1-202ENST00000357324 ANP32CO43423 234 aa20.02■□□□□ 0.8
ATP13A1-202ENST00000357324 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
ATP13A1-202ENST00000357324 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
ATP13A1-202ENST00000357324 NACADO15069 1562 aa19.95■□□□□ 0.78
ATP13A1-202ENST00000357324 EEA1Q15075 1411 aa19.92■□□□□ 0.78
ATP13A1-202ENST00000357324 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
ATP13A1-202ENST00000357324 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
ATP13A1-202ENST00000357324 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
ATP13A1-202ENST00000357324 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
ATP13A1-202ENST00000357324 ANP32EQ9BTT0 268 aa19.87■□□□□ 0.77
ATP13A1-202ENST00000357324 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.77
ATP13A1-202ENST00000357324 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.77
ATP13A1-202ENST00000357324 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
ATP13A1-202ENST00000357324 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
ATP13A1-202ENST00000357324 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
ATP13A1-202ENST00000357324 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
ATP13A1-202ENST00000357324 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
ATP13A1-202ENST00000357324 RBM19Q9Y4C8 960 aaKnown RBP19.72■□□□□ 0.75
ATP13A1-202ENST00000357324 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
ATP13A1-202ENST00000357324 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
ATP13A1-202ENST00000357324 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
ATP13A1-202ENST00000357324 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
ATP13A1-202ENST00000357324 RRP7BPQ9NSQ0 103 aa19.67■□□□□ 0.74
ATP13A1-202ENST00000357324 NBR1Q14596 966 aa19.66■□□□□ 0.74
ATP13A1-202ENST00000357324 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
ATP13A1-202ENST00000357324 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms