RNA–Protein interactions for RNA: ENST00000360612.4

PIM3-201, Transcript of Pim-3 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIM3, Length 2,369 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIM3-201ENST00000360612 NISCHQ9Y2I1 1504 aa49.82■■■■■ 5.57
PIM3-201ENST00000360612 CCDC180Q9P1Z9 1646 aa42.58■■■■■ 4.41
PIM3-201ENST00000360612 ZCCHC6Q5VYS8 1495 aaKnown RBP42.13■■■■■ 4.33
PIM3-201ENST00000360612 SHROOM4Q9ULL8 1493 aa42.02■■■■■ 4.32
PIM3-201ENST00000360612 SUPT5HO00267 1087 aaKnown RBP41.19■■■■■ 4.18
PIM3-201ENST00000360612 DCAF1Q9Y4B6 1507 aa41.05■■■■■ 4.16
PIM3-201ENST00000360612 DCAF8L2P0C7V8 631 aa41.04■■■■■ 4.16
PIM3-201ENST00000360612 CHIC1Q5VXU3 224 aa40.1■■■■■ 4.01
PIM3-201ENST00000360612 MYO15BQ96JP2 1530 aa39.96■■■■□ 3.99
PIM3-201ENST00000360612 ABCC9O60706 1549 aa39.72■■■■□ 3.95
PIM3-201ENST00000360612 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
PIM3-201ENST00000360612 NACADO15069 1562 aa39.37■■■■□ 3.89
PIM3-201ENST00000360612 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
PIM3-201ENST00000360612 RB1CC1Q8TDY2 1594 aa38.94■■■■□ 3.82
PIM3-201ENST00000360612 LOC105371045A0A1W2PR82 267 aa38.76■■■■□ 3.8
PIM3-201ENST00000360612 CECR2Q9BXF3 1484 aa38.71■■■■□ 3.79
PIM3-201ENST00000360612 HRCP23327 699 aa38.63■■■■□ 3.77
PIM3-201ENST00000360612 MROH2BQ7Z745 1585 aa38.62■■■■□ 3.77
PIM3-201ENST00000360612 PCGF6Q9BYE7 350 aa38.6■■■■□ 3.77
PIM3-201ENST00000360612 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
PIM3-201ENST00000360612 WIZO95785 1651 aa38.4■■■■□ 3.74
PIM3-201ENST00000360612 BAZ1AQ9NRL2 1556 aaPredicted RBP38.33■■■■□ 3.73
PIM3-201ENST00000360612 TRIM26Q12899 539 aaPredicted RBP38.1■■■■□ 3.69
PIM3-201ENST00000360612 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
PIM3-201ENST00000360612 FAM9AQ8IZU1 332 aaPredicted RBP38■■■■□ 3.67
PIM3-201ENST00000360612 SMARCA4P51532 1647 aa37.97■■■■□ 3.67
PIM3-201ENST00000360612 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
PIM3-201ENST00000360612 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
PIM3-201ENST00000360612 CCDC88BA6NC98 1476 aa37.67■■■■□ 3.62
PIM3-201ENST00000360612 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
PIM3-201ENST00000360612 PPARGC1BQ86YN6 1023 aaKnown RBP37.6■■■■□ 3.61
PIM3-201ENST00000360612 BICRAQ9NZM4 1560 aa37.57■■■■□ 3.6
PIM3-201ENST00000360612 EHMT2Q96KQ7 1210 aa37.53■■■■□ 3.6
PIM3-201ENST00000360612 PABPN1Q86U42 306 aaKnown RBP eCLIP37.51■■■■□ 3.63e-6■■□□□ 13.3
PIM3-201ENST00000360612 ABCC8Q09428 1581 aa37.43■■■■□ 3.58
PIM3-201ENST00000360612 PEG3Q9GZU2 1588 aa37.35■■■■□ 3.57
PIM3-201ENST00000360612 ZEB1P37275 1124 aaPredicted RBP37.32■■■■□ 3.57
PIM3-201ENST00000360612 EEA1Q15075 1411 aa37.12■■■■□ 3.53
PIM3-201ENST00000360612 SOGA1O94964 1423 aa37.06■■■■□ 3.52
PIM3-201ENST00000360612 ATAD2BQ9ULI0 1458 aa37.01■■■■□ 3.51
PIM3-201ENST00000360612 WRNQ14191 1432 aaPredicted RBP eCLIP36.95■■■■□ 3.512e-9■■■■■ 39.4
PIM3-201ENST00000360612 TNIKQ9UKE5 1360 aa36.94■■■■□ 3.5
PIM3-201ENST00000360612 CSRNP3Q8WYN3 585 aa36.93■■■■□ 3.5
PIM3-201ENST00000360612 BAZ1BQ9UIG0 1483 aaKnown RBP36.91■■■■□ 3.5
PIM3-201ENST00000360612 CEP162Q5TB80 1403 aa36.9■■■■□ 3.5
PIM3-201ENST00000360612 RUSC2Q8N2Y8 1516 aa36.84■■■■□ 3.49
PIM3-201ENST00000360612 GOLGA3Q08378 1498 aa36.75■■■■□ 3.47
PIM3-201ENST00000360612 SYNJ1O43426 1573 aa36.73■■■■□ 3.47
PIM3-201ENST00000360612 UBTFP17480 764 aaKnown RBP36.69■■■■□ 3.46
PIM3-201ENST00000360612 CEP164Q9UPV0 1460 aa36.58■■■■□ 3.45
PIM3-201ENST00000360612 KIF21BO75037 1637 aa36.56■■■■□ 3.44
PIM3-201ENST00000360612 CCER1Q8TC90 406 aaPredicted RBP36.42■■■■□ 3.42
PIM3-201ENST00000360612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.42■■■■□ 3.42
PIM3-201ENST00000360612 HMGXB3Q12766 1538 aa36.41■■■■□ 3.42
PIM3-201ENST00000360612 TOP2BQ02880 1626 aa36.4■■■■□ 3.42
PIM3-201ENST00000360612 NCAPD3P42695 1498 aa36.38■■■■□ 3.41
PIM3-201ENST00000360612 TTBK1Q5TCY1 1321 aaPredicted RBP36.33■■■■□ 3.41
PIM3-201ENST00000360612 BIVM-ERCC5R4GMW8 1640 aa36.29■■■■□ 3.4
PIM3-201ENST00000360612 CLIP1P30622 1438 aa36.27■■■■□ 3.4
PIM3-201ENST00000360612 RAPGEF2Q9Y4G8 1499 aa36.21■■■■□ 3.39
PIM3-201ENST00000360612 VPS8Q8N3P4 1428 aa36.13■■■■□ 3.37
PIM3-201ENST00000360612 ERICH3Q5RHP9 1530 aa36.03■■■■□ 3.36
PIM3-201ENST00000360612 CFTRP13569 1480 aa36.02■■■■□ 3.36
PIM3-201ENST00000360612 CUX1P39880 1505 aa35.99■■■■□ 3.35
PIM3-201ENST00000360612 PRXQ9BXM0 1461 aa35.98■■■■□ 3.35
PIM3-201ENST00000360612 APLP2Q06481 763 aa35.95■■■■□ 3.35
PIM3-201ENST00000360612 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
PIM3-201ENST00000360612 PRDM2Q13029 1718 aa35.82■■■■□ 3.32
PIM3-201ENST00000360612 RANGAP1P46060 587 aaPredicted RBP35.79■■■■□ 3.32
PIM3-201ENST00000360612 HNRNPUL2Q1KMD3 747 aaKnown RBP35.71■■■■□ 3.31
PIM3-201ENST00000360612 ARAP1Q96P48 1450 aa35.68■■■■□ 3.3
PIM3-201ENST00000360612 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
PIM3-201ENST00000360612 DIEXFQ68CQ4 756 aaKnown RBP35.62■■■■□ 3.29
PIM3-201ENST00000360612 CC2D2AQ9P2K1 1620 aa35.53■■■■□ 3.28
PIM3-201ENST00000360612 CUX2O14529 1486 aa35.48■■■■□ 3.27
PIM3-201ENST00000360612 ZNF316A6NFI3 1004 aaPredicted RBP35.46■■■■□ 3.27
PIM3-201ENST00000360612 IGF1RP08069 1367 aa35.42■■■■□ 3.26
PIM3-201ENST00000360612 ARHGAP35Q9NRY4 1499 aa35.41■■■■□ 3.26
PIM3-201ENST00000360612 FGD5Q6ZNL6 1462 aa35.38■■■■□ 3.25
PIM3-201ENST00000360612 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
PIM3-201ENST00000360612 SCAF1Q9H7N4 1312 aaKnown RBP35.36■■■■□ 3.25
PIM3-201ENST00000360612 RRBP1Q9P2E9 1410 aaKnown RBP35.29■■■■□ 3.24
PIM3-201ENST00000360612 CARMIL1Q5VZK9 1371 aa35.28■■■■□ 3.24
PIM3-201ENST00000360612 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.23
PIM3-201ENST00000360612 CLSPNQ9HAW4 1339 aa35.26■■■■□ 3.23
PIM3-201ENST00000360612 ACIN1Q9UKV3 1341 aaKnown RBP35.22■■■■□ 3.23
PIM3-201ENST00000360612 CENPBP07199 599 aaPredicted RBP35.16■■■■□ 3.22
PIM3-201ENST00000360612 MAP3K1Q13233 1512 aa35.14■■■■□ 3.22
PIM3-201ENST00000360612 DNMBPQ6XZF7 1577 aa35.14■■■■□ 3.22
PIM3-201ENST00000360612 DHX57Q6P158 1386 aaKnown RBP35.12■■■■□ 3.21
PIM3-201ENST00000360612 CCNB3Q8WWL7 1395 aa35.11■■■■□ 3.21
PIM3-201ENST00000360612 NEUROD1Q13562 356 aa35.09■■■■□ 3.21
PIM3-201ENST00000360612 TIAM1Q13009 1591 aa35.06■■■■□ 3.2
PIM3-201ENST00000360612 ABCA10Q8WWZ4 1543 aa35.04■■■■□ 3.2
PIM3-201ENST00000360612 TOPBP1Q92547 1522 aa35.02■■■■□ 3.2
PIM3-201ENST00000360612 FHAD1B1AJZ9 1412 aa34.99■■■■□ 3.19
PIM3-201ENST00000360612 POLA1P09884 1462 aaPredicted RBP34.98■■■■□ 3.19
PIM3-201ENST00000360612 RAD54L2Q9Y4B4 1467 aa34.96■■■■□ 3.19
PIM3-201ENST00000360612 NESP48681 1621 aa34.95■■■■□ 3.19
PIM3-201ENST00000360612 LRRC9Q6ZRR7 1453 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms