RNA–Protein interactions for RNA: ENST00000216271.9

HDAC10-201, Transcript of histone deacetylase 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC10, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-201ENST00000216271 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
HDAC10-201ENST00000216271 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
HDAC10-201ENST00000216271 SUPT5HO00267 1087 aaKnown RBP31.26■■■□□ 2.6
HDAC10-201ENST00000216271 ZCCHC6Q5VYS8 1495 aaKnown RBP30.86■■■□□ 2.53
HDAC10-201ENST00000216271 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
HDAC10-201ENST00000216271 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
HDAC10-201ENST00000216271 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
HDAC10-201ENST00000216271 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
HDAC10-201ENST00000216271 PCGF6Q9BYE7 350 aa29.67■■■□□ 2.34
HDAC10-201ENST00000216271 LOC105371045A0A1W2PR82 267 aa29.67■■■□□ 2.34
HDAC10-201ENST00000216271 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
HDAC10-201ENST00000216271 HRCP23327 699 aa29.52■■■□□ 2.32
HDAC10-201ENST00000216271 PPARGC1BQ86YN6 1023 aaKnown RBP29.39■■■□□ 2.3
HDAC10-201ENST00000216271 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
HDAC10-201ENST00000216271 ABCC9O60706 1549 aa29.14■■■□□ 2.26
HDAC10-201ENST00000216271 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
HDAC10-201ENST00000216271 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
HDAC10-201ENST00000216271 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.23
HDAC10-201ENST00000216271 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
HDAC10-201ENST00000216271 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
HDAC10-201ENST00000216271 CECR2Q9BXF3 1484 aa28.77■■■□□ 2.2
HDAC10-201ENST00000216271 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
HDAC10-201ENST00000216271 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
HDAC10-201ENST00000216271 WIZO95785 1651 aa28.47■■■□□ 2.15
HDAC10-201ENST00000216271 NACADO15069 1562 aa28.35■■■□□ 2.13
HDAC10-201ENST00000216271 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
HDAC10-201ENST00000216271 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
HDAC10-201ENST00000216271 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
HDAC10-201ENST00000216271 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.06
HDAC10-201ENST00000216271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
HDAC10-201ENST00000216271 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.06
HDAC10-201ENST00000216271 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
HDAC10-201ENST00000216271 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.058e-8■■□□□ 13.3
HDAC10-201ENST00000216271 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
HDAC10-201ENST00000216271 SOGA1O94964 1423 aa27.76■■■□□ 2.03
HDAC10-201ENST00000216271 SMARCA4P51532 1647 aa27.76■■■□□ 2.03
HDAC10-201ENST00000216271 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
HDAC10-201ENST00000216271 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
HDAC10-201ENST00000216271 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
HDAC10-201ENST00000216271 CCER1Q8TC90 406 aaPredicted RBP27.64■■■□□ 2.02
HDAC10-201ENST00000216271 CEP162Q5TB80 1403 aa27.55■■■□□ 2
HDAC10-201ENST00000216271 SCAF1Q9H7N4 1312 aaKnown RBP27.52■■■□□ 2
HDAC10-201ENST00000216271 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
HDAC10-201ENST00000216271 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
HDAC10-201ENST00000216271 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
HDAC10-201ENST00000216271 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
HDAC10-201ENST00000216271 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
HDAC10-201ENST00000216271 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
HDAC10-201ENST00000216271 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
HDAC10-201ENST00000216271 NEUROD1Q13562 356 aa27.16■■□□□ 1.94
HDAC10-201ENST00000216271 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
HDAC10-201ENST00000216271 DIEXFQ68CQ4 756 aaKnown RBP27.15■■□□□ 1.94
HDAC10-201ENST00000216271 GOLGA3Q08378 1498 aa27.14■■□□□ 1.94
HDAC10-201ENST00000216271 EEA1Q15075 1411 aa27.07■■□□□ 1.92
HDAC10-201ENST00000216271 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
HDAC10-201ENST00000216271 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
HDAC10-201ENST00000216271 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
HDAC10-201ENST00000216271 ACIN1Q9UKV3 1341 aaKnown RBP26.99■■□□□ 1.91
HDAC10-201ENST00000216271 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
HDAC10-201ENST00000216271 CLIP1P30622 1438 aa26.97■■□□□ 1.91
HDAC10-201ENST00000216271 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
HDAC10-201ENST00000216271 YTHDC1Q96MU7 727 aaKnown RBP26.85■■□□□ 1.89
HDAC10-201ENST00000216271 GTF3C3Q9Y5Q9 886 aa26.85■■□□□ 1.89
HDAC10-201ENST00000216271 KIF21BO75037 1637 aa26.84■■□□□ 1.89
HDAC10-201ENST00000216271 ZNF316A6NFI3 1004 aaPredicted RBP26.82■■□□□ 1.88
HDAC10-201ENST00000216271 VPS8Q8N3P4 1428 aa26.78■■□□□ 1.88
HDAC10-201ENST00000216271 APLP2Q06481 763 aa26.72■■□□□ 1.87
HDAC10-201ENST00000216271 MIER1Q8N108 512 aa26.7■■□□□ 1.86
HDAC10-201ENST00000216271 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
HDAC10-201ENST00000216271 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
HDAC10-201ENST00000216271 CENPBP07199 599 aaPredicted RBP26.6■■□□□ 1.85
HDAC10-201ENST00000216271 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
HDAC10-201ENST00000216271 CUX1P39880 1505 aa26.54■■□□□ 1.84
HDAC10-201ENST00000216271 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
HDAC10-201ENST00000216271 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
HDAC10-201ENST00000216271 ITGAEP38570 1179 aa26.48■■□□□ 1.83
HDAC10-201ENST00000216271 PELP1Q8IZL8 1130 aaKnown RBP26.4■■□□□ 1.82
HDAC10-201ENST00000216271 DHX57Q6P158 1386 aaKnown RBP26.39■■□□□ 1.81
HDAC10-201ENST00000216271 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
HDAC10-201ENST00000216271 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
HDAC10-201ENST00000216271 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
HDAC10-201ENST00000216271 ARHGAP35Q9NRY4 1499 aa26.29■■□□□ 1.8
HDAC10-201ENST00000216271 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
HDAC10-201ENST00000216271 CFTRP13569 1480 aa26.25■■□□□ 1.79
HDAC10-201ENST00000216271 P3H3Q8IVL6 736 aa26.22■■□□□ 1.79
HDAC10-201ENST00000216271 CUX2O14529 1486 aa26.2■■□□□ 1.78
HDAC10-201ENST00000216271 IGF1RP08069 1367 aa26.15■■□□□ 1.78
HDAC10-201ENST00000216271 RRBP1Q9P2E9 1410 aaKnown RBP26.15■■□□□ 1.78
HDAC10-201ENST00000216271 CCNB3Q8WWL7 1395 aa26.12■■□□□ 1.77
HDAC10-201ENST00000216271 ATP1B4Q9UN42 357 aaPredicted RBP26.11■■□□□ 1.77
HDAC10-201ENST00000216271 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
HDAC10-201ENST00000216271 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
HDAC10-201ENST00000216271 RAB3GAP2Q9H2M9 1393 aa26.02■■□□□ 1.76
HDAC10-201ENST00000216271 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
HDAC10-201ENST00000216271 FAM50AQ14320 339 aaKnown RBP25.99■■□□□ 1.75
HDAC10-201ENST00000216271 SIN3AQ96ST3 1273 aa25.99■■□□□ 1.75
HDAC10-201ENST00000216271 PHLDB1Q86UU1 1377 aa25.98■■□□□ 1.75
HDAC10-201ENST00000216271 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
HDAC10-201ENST00000216271 CLSPNQ9HAW4 1339 aa25.96■■□□□ 1.75
HDAC10-201ENST00000216271 HIRIP3Q9BW71 556 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms