RNA–Protein interactions for RNA: ENST00000554989.1

CKB-210, Transcript of creatine kinase B, humanhuman

TSL 2

Gene CKB, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-210ENST00000554989 NISCHQ9Y2I1 1504 aa38.18■■■■□ 3.7
CKB-210ENST00000554989 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
CKB-210ENST00000554989 ABCC9O60706 1549 aa32.94■■■□□ 2.86
CKB-210ENST00000554989 NACADO15069 1562 aa31.89■■■□□ 2.7
CKB-210ENST00000554989 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
CKB-210ENST00000554989 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
CKB-210ENST00000554989 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
CKB-210ENST00000554989 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
CKB-210ENST00000554989 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.66
CKB-210ENST00000554989 UNC13AQ9UPW8 1703 aa31.08■■■□□ 2.57
CKB-210ENST00000554989 BICRAQ9NZM4 1560 aa30.85■■■□□ 2.53
CKB-210ENST00000554989 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
CKB-210ENST00000554989 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.523e-6■■□□□ 13.3
CKB-210ENST00000554989 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
CKB-210ENST00000554989 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
CKB-210ENST00000554989 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
CKB-210ENST00000554989 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
CKB-210ENST00000554989 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
CKB-210ENST00000554989 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
CKB-210ENST00000554989 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
CKB-210ENST00000554989 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
CKB-210ENST00000554989 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
CKB-210ENST00000554989 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
CKB-210ENST00000554989 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
CKB-210ENST00000554989 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
CKB-210ENST00000554989 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
CKB-210ENST00000554989 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
CKB-210ENST00000554989 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
CKB-210ENST00000554989 WIZO95785 1651 aa29.04■■■□□ 2.24
CKB-210ENST00000554989 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
CKB-210ENST00000554989 LAMC3Q9Y6N6 1575 aa28.61■■■□□ 2.17
CKB-210ENST00000554989 NESP48681 1621 aa28.54■■■□□ 2.16
CKB-210ENST00000554989 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
CKB-210ENST00000554989 CCDC88BA6NC98 1476 aa28.44■■■□□ 2.14
CKB-210ENST00000554989 ERCC6Q03468 1493 aa28.41■■■□□ 2.14
CKB-210ENST00000554989 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
CKB-210ENST00000554989 CFTRP13569 1480 aa28.4■■■□□ 2.14
CKB-210ENST00000554989 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
CKB-210ENST00000554989 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
CKB-210ENST00000554989 PRDM2Q13029 1718 aa28.19■■■□□ 2.1
CKB-210ENST00000554989 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
CKB-210ENST00000554989 CUX2O14529 1486 aa28.16■■■□□ 2.1
CKB-210ENST00000554989 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
CKB-210ENST00000554989 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
CKB-210ENST00000554989 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
CKB-210ENST00000554989 WDR62O43379 1518 aa27.99■■■□□ 2.07
CKB-210ENST00000554989 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
CKB-210ENST00000554989 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
CKB-210ENST00000554989 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
CKB-210ENST00000554989 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
CKB-210ENST00000554989 IFT140Q96RY7 1462 aa27.57■■■□□ 2
CKB-210ENST00000554989 CUX1P39880 1505 aa27.55■■■□□ 2
CKB-210ENST00000554989 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
CKB-210ENST00000554989 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
CKB-210ENST00000554989 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
CKB-210ENST00000554989 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
CKB-210ENST00000554989 SOGA1O94964 1423 aa27.41■■□□□ 1.98
CKB-210ENST00000554989 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
CKB-210ENST00000554989 BIVM-ERCC5R4GMW8 1640 aa27.39■■□□□ 1.98
CKB-210ENST00000554989 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
CKB-210ENST00000554989 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
CKB-210ENST00000554989 RAD54L2Q9Y4B4 1467 aa27.33■■□□□ 1.97
CKB-210ENST00000554989 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
CKB-210ENST00000554989 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
CKB-210ENST00000554989 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
CKB-210ENST00000554989 AQRO60306 1485 aaKnown RBP eCLIP27.22■■□□□ 1.957e-9■■■■□ 24.2
CKB-210ENST00000554989 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
CKB-210ENST00000554989 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
CKB-210ENST00000554989 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
CKB-210ENST00000554989 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
CKB-210ENST00000554989 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
CKB-210ENST00000554989 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
CKB-210ENST00000554989 PBRM1Q86U86 1689 aa27■■□□□ 1.91
CKB-210ENST00000554989 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
CKB-210ENST00000554989 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
CKB-210ENST00000554989 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
CKB-210ENST00000554989 SYNJ2O15056 1496 aa26.9■■□□□ 1.9
CKB-210ENST00000554989 CHD1O14646 1710 aa26.89■■□□□ 1.9
CKB-210ENST00000554989 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
CKB-210ENST00000554989 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
CKB-210ENST00000554989 TRIM41Q8WV44 630 aa26.85■■□□□ 1.89
CKB-210ENST00000554989 FBLN2P98095 1184 aa26.82■■□□□ 1.88
CKB-210ENST00000554989 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
CKB-210ENST00000554989 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
CKB-210ENST00000554989 IGF1RP08069 1367 aa26.75■■□□□ 1.87
CKB-210ENST00000554989 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
CKB-210ENST00000554989 CUL7Q14999 1698 aa26.7■■□□□ 1.87
CKB-210ENST00000554989 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
CKB-210ENST00000554989 NUP160Q12769 1436 aa26.63■■□□□ 1.85
CKB-210ENST00000554989 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
CKB-210ENST00000554989 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
CKB-210ENST00000554989 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
CKB-210ENST00000554989 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
CKB-210ENST00000554989 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
CKB-210ENST00000554989 EEA1Q15075 1411 aa26.5■■□□□ 1.83
CKB-210ENST00000554989 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
CKB-210ENST00000554989 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
CKB-210ENST00000554989 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
CKB-210ENST00000554989 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
CKB-210ENST00000554989 SHROOM2Q13796 1616 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms