RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
AGAP3-212ENST00000473633 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
AGAP3-212ENST00000473633 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
AGAP3-212ENST00000473633 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
AGAP3-212ENST00000473633 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
AGAP3-212ENST00000473633 ABCC9O60706 1549 aa15.93■□□□□ 0.14
AGAP3-212ENST00000473633 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
AGAP3-212ENST00000473633 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
AGAP3-212ENST00000473633 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
AGAP3-212ENST00000473633 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
AGAP3-212ENST00000473633 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
AGAP3-212ENST00000473633 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■□□□ 13.3
AGAP3-212ENST00000473633 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
AGAP3-212ENST00000473633 HRCP23327 699 aa15.31■□□□□ 0.04
AGAP3-212ENST00000473633 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
AGAP3-212ENST00000473633 FAM9AQ8IZU1 332 aaPredicted RBP15.29■□□□□ 0.04
AGAP3-212ENST00000473633 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
AGAP3-212ENST00000473633 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
AGAP3-212ENST00000473633 MYT1Q01538 1121 aa15.22■□□□□ 0.03
AGAP3-212ENST00000473633 NACADO15069 1562 aa15.07■□□□□ 0
AGAP3-212ENST00000473633 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
AGAP3-212ENST00000473633 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
AGAP3-212ENST00000473633 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
AGAP3-212ENST00000473633 TRIM41Q8WV44 630 aa15□□□□□ -0.01
AGAP3-212ENST00000473633 TTBK1Q5TCY1 1321 aaPredicted RBP14.99□□□□□ -0.01
AGAP3-212ENST00000473633 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
AGAP3-212ENST00000473633 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
AGAP3-212ENST00000473633 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
AGAP3-212ENST00000473633 WIZO95785 1651 aa14.68□□□□□ -0.06
AGAP3-212ENST00000473633 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
AGAP3-212ENST00000473633 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
AGAP3-212ENST00000473633 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
AGAP3-212ENST00000473633 CENPBP07199 599 aaPredicted RBP14.61□□□□□ -0.07
AGAP3-212ENST00000473633 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
AGAP3-212ENST00000473633 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
AGAP3-212ENST00000473633 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
AGAP3-212ENST00000473633 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
AGAP3-212ENST00000473633 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
AGAP3-212ENST00000473633 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
AGAP3-212ENST00000473633 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
AGAP3-212ENST00000473633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
AGAP3-212ENST00000473633 CCDC88BA6NC98 1476 aa14.45□□□□□ -0.1
AGAP3-212ENST00000473633 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
AGAP3-212ENST00000473633 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
AGAP3-212ENST00000473633 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
AGAP3-212ENST00000473633 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
AGAP3-212ENST00000473633 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
AGAP3-212ENST00000473633 ACIN1Q9UKV3 1341 aaKnown RBP14.31□□□□□ -0.12
AGAP3-212ENST00000473633 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
AGAP3-212ENST00000473633 CSRNP3Q8WYN3 585 aa14.26□□□□□ -0.13
AGAP3-212ENST00000473633 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
AGAP3-212ENST00000473633 SOGA1O94964 1423 aa14.24□□□□□ -0.13
AGAP3-212ENST00000473633 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
AGAP3-212ENST00000473633 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
AGAP3-212ENST00000473633 APLP2Q06481 763 aa14.22□□□□□ -0.13
AGAP3-212ENST00000473633 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
AGAP3-212ENST00000473633 WRNQ14191 1432 aaPredicted RBP eCLIP14.2□□□□□ -0.14
AGAP3-212ENST00000473633 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
AGAP3-212ENST00000473633 RUSC2Q8N2Y8 1516 aa14.16□□□□□ -0.14
AGAP3-212ENST00000473633 NEUROD1Q13562 356 aa14.13□□□□□ -0.15
AGAP3-212ENST00000473633 ATP1B4Q9UN42 357 aaPredicted RBP14.13□□□□□ -0.15
AGAP3-212ENST00000473633 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
AGAP3-212ENST00000473633 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
AGAP3-212ENST00000473633 ITGAEP38570 1179 aa14.05□□□□□ -0.16
AGAP3-212ENST00000473633 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
AGAP3-212ENST00000473633 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
AGAP3-212ENST00000473633 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
AGAP3-212ENST00000473633 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
AGAP3-212ENST00000473633 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.18
AGAP3-212ENST00000473633 NESP48681 1621 aa13.94□□□□□ -0.18
AGAP3-212ENST00000473633 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
AGAP3-212ENST00000473633 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
AGAP3-212ENST00000473633 FBLN2P98095 1184 aa13.86□□□□□ -0.19
AGAP3-212ENST00000473633 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
AGAP3-212ENST00000473633 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 CUX2O14529 1486 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 CFTRP13569 1480 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
AGAP3-212ENST00000473633 CLIP1P30622 1438 aa13.83□□□□□ -0.2
AGAP3-212ENST00000473633 EEA1Q15075 1411 aa13.82□□□□□ -0.2
AGAP3-212ENST00000473633 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
AGAP3-212ENST00000473633 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
AGAP3-212ENST00000473633 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
AGAP3-212ENST00000473633 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
AGAP3-212ENST00000473633 CUX1P39880 1505 aa13.77□□□□□ -0.2
AGAP3-212ENST00000473633 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
AGAP3-212ENST00000473633 BCL11AQ9H165 835 aa13.77□□□□□ -0.21
AGAP3-212ENST00000473633 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
AGAP3-212ENST00000473633 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
AGAP3-212ENST00000473633 CARMIL1Q5VZK9 1371 aa13.72□□□□□ -0.21
AGAP3-212ENST00000473633 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
AGAP3-212ENST00000473633 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
AGAP3-212ENST00000473633 IGF1RP08069 1367 aa13.68□□□□□ -0.22
AGAP3-212ENST00000473633 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
AGAP3-212ENST00000473633 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
AGAP3-212ENST00000473633 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
AGAP3-212ENST00000473633 MIER1Q8N108 512 aa13.67□□□□□ -0.22
AGAP3-212ENST00000473633 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms