RNA–Protein interactions for RNA: ENST00000626012.2

HDAC10-222, Transcript of histone deacetylase 10, humanhuman

TSL 5 BASIC

Gene HDAC10, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-222ENST00000626012 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
HDAC10-222ENST00000626012 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
HDAC10-222ENST00000626012 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
HDAC10-222ENST00000626012 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
HDAC10-222ENST00000626012 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
HDAC10-222ENST00000626012 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
HDAC10-222ENST00000626012 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
HDAC10-222ENST00000626012 CHIC1Q5VXU3 224 aa29.81■■■□□ 2.36
HDAC10-222ENST00000626012 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
HDAC10-222ENST00000626012 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
HDAC10-222ENST00000626012 SCRIBQ14160 1630 aa29.15■■■□□ 2.26
HDAC10-222ENST00000626012 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
HDAC10-222ENST00000626012 ABCC9O60706 1549 aa28.93■■■□□ 2.22
HDAC10-222ENST00000626012 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
HDAC10-222ENST00000626012 HRCP23327 699 aa28.82■■■□□ 2.2
HDAC10-222ENST00000626012 EHMT2Q96KQ7 1210 aa28.73■■■□□ 2.19
HDAC10-222ENST00000626012 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.18
HDAC10-222ENST00000626012 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
HDAC10-222ENST00000626012 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
HDAC10-222ENST00000626012 CECR2Q9BXF3 1484 aa28.6■■■□□ 2.17
HDAC10-222ENST00000626012 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
HDAC10-222ENST00000626012 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
HDAC10-222ENST00000626012 NACADO15069 1562 aa28.31■■■□□ 2.12
HDAC10-222ENST00000626012 WIZO95785 1651 aa28.26■■■□□ 2.11
HDAC10-222ENST00000626012 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
HDAC10-222ENST00000626012 PABPN1Q86U42 306 aaKnown RBP eCLIP27.88■■■□□ 2.058e-8■■□□□ 13.3
HDAC10-222ENST00000626012 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
HDAC10-222ENST00000626012 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
HDAC10-222ENST00000626012 TTBK1Q5TCY1 1321 aaPredicted RBP27.73■■■□□ 2.03
HDAC10-222ENST00000626012 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
HDAC10-222ENST00000626012 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
HDAC10-222ENST00000626012 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
HDAC10-222ENST00000626012 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
HDAC10-222ENST00000626012 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
HDAC10-222ENST00000626012 SMARCA2P51531 1590 aa27.52■■■□□ 2
HDAC10-222ENST00000626012 SOGA1O94964 1423 aa27.49■■□□□ 1.99
HDAC10-222ENST00000626012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.44■■□□□ 1.98
HDAC10-222ENST00000626012 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
HDAC10-222ENST00000626012 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
HDAC10-222ENST00000626012 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
HDAC10-222ENST00000626012 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
HDAC10-222ENST00000626012 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
HDAC10-222ENST00000626012 CSRNP3Q8WYN3 585 aa27.19■■□□□ 1.94
HDAC10-222ENST00000626012 CCER1Q8TC90 406 aaPredicted RBP27.18■■□□□ 1.94
HDAC10-222ENST00000626012 RANGAP1P46060 587 aaPredicted RBP27.14■■□□□ 1.93
HDAC10-222ENST00000626012 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
HDAC10-222ENST00000626012 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
HDAC10-222ENST00000626012 SYNJ1O43426 1573 aa27■■□□□ 1.91
HDAC10-222ENST00000626012 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
HDAC10-222ENST00000626012 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
HDAC10-222ENST00000626012 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
HDAC10-222ENST00000626012 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
HDAC10-222ENST00000626012 EEA1Q15075 1411 aa26.81■■□□□ 1.88
HDAC10-222ENST00000626012 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
HDAC10-222ENST00000626012 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
HDAC10-222ENST00000626012 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
HDAC10-222ENST00000626012 CLIP1P30622 1438 aa26.69■■□□□ 1.86
HDAC10-222ENST00000626012 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
HDAC10-222ENST00000626012 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
HDAC10-222ENST00000626012 KIF21BO75037 1637 aa26.56■■□□□ 1.84
HDAC10-222ENST00000626012 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
HDAC10-222ENST00000626012 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
HDAC10-222ENST00000626012 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
HDAC10-222ENST00000626012 APLP2Q06481 763 aa26.46■■□□□ 1.83
HDAC10-222ENST00000626012 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
HDAC10-222ENST00000626012 CUX1P39880 1505 aa26.38■■□□□ 1.81
HDAC10-222ENST00000626012 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
HDAC10-222ENST00000626012 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
HDAC10-222ENST00000626012 BIVM-ERCC5R4GMW8 1640 aa26.3■■□□□ 1.8
HDAC10-222ENST00000626012 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
HDAC10-222ENST00000626012 YTHDC1Q96MU7 727 aaKnown RBP26.29■■□□□ 1.8
HDAC10-222ENST00000626012 PRXQ9BXM0 1461 aa26.27■■□□□ 1.8
HDAC10-222ENST00000626012 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
HDAC10-222ENST00000626012 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
HDAC10-222ENST00000626012 ITGAEP38570 1179 aa26.2■■□□□ 1.78
HDAC10-222ENST00000626012 CFTRP13569 1480 aa26.17■■□□□ 1.78
HDAC10-222ENST00000626012 GTF3C3Q9Y5Q9 886 aa26.17■■□□□ 1.78
HDAC10-222ENST00000626012 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
HDAC10-222ENST00000626012 MIER1Q8N108 512 aa26.15■■□□□ 1.78
HDAC10-222ENST00000626012 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
HDAC10-222ENST00000626012 CUX2O14529 1486 aa26.06■■□□□ 1.76
HDAC10-222ENST00000626012 P3H3Q8IVL6 736 aa26.05■■□□□ 1.76
HDAC10-222ENST00000626012 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
HDAC10-222ENST00000626012 IGF1RP08069 1367 aa25.99■■□□□ 1.75
HDAC10-222ENST00000626012 CENPBP07199 599 aaPredicted RBP25.99■■□□□ 1.75
HDAC10-222ENST00000626012 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
HDAC10-222ENST00000626012 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
HDAC10-222ENST00000626012 ATP1B4Q9UN42 357 aaPredicted RBP25.94■■□□□ 1.74
HDAC10-222ENST00000626012 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
HDAC10-222ENST00000626012 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
HDAC10-222ENST00000626012 CC2D2AQ9P2K1 1620 aa25.84■■□□□ 1.73
HDAC10-222ENST00000626012 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.73
HDAC10-222ENST00000626012 NESP48681 1621 aa25.83■■□□□ 1.73
HDAC10-222ENST00000626012 CCNB3Q8WWL7 1395 aa25.83■■□□□ 1.72
HDAC10-222ENST00000626012 RRBP1Q9P2E9 1410 aaKnown RBP25.81■■□□□ 1.72
HDAC10-222ENST00000626012 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
HDAC10-222ENST00000626012 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
HDAC10-222ENST00000626012 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
HDAC10-222ENST00000626012 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
HDAC10-222ENST00000626012 PHLDB1Q86UU1 1377 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms