RNA–Protein interactions for RNA: ENST00000283871.9

HGD-201, Transcript of homogentisate 1,2-dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HGD, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGD-201ENST00000283871 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
HGD-201ENST00000283871 CCDC180Q9P1Z9 1646 aa15.49■□□□□ 0.07
HGD-201ENST00000283871 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.06
HGD-201ENST00000283871 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
HGD-201ENST00000283871 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
HGD-201ENST00000283871 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
HGD-201ENST00000283871 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
HGD-201ENST00000283871 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
HGD-201ENST00000283871 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
HGD-201ENST00000283871 ABCC9O60706 1549 aa14.56□□□□□ -0.08
HGD-201ENST00000283871 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
HGD-201ENST00000283871 HRCP23327 699 aa14.37□□□□□ -0.11
HGD-201ENST00000283871 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
HGD-201ENST00000283871 LOC105371045A0A1W2PR82 267 aa14.31□□□□□ -0.12
HGD-201ENST00000283871 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
HGD-201ENST00000283871 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
HGD-201ENST00000283871 NACADO15069 1562 aa14.25□□□□□ -0.13
HGD-201ENST00000283871 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
HGD-201ENST00000283871 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
HGD-201ENST00000283871 WIZO95785 1651 aa14.09□□□□□ -0.15
HGD-201ENST00000283871 PPARGC1BQ86YN6 1023 aaKnown RBP14.08□□□□□ -0.16
HGD-201ENST00000283871 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
HGD-201ENST00000283871 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
HGD-201ENST00000283871 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
HGD-201ENST00000283871 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
HGD-201ENST00000283871 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
HGD-201ENST00000283871 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
HGD-201ENST00000283871 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
HGD-201ENST00000283871 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
HGD-201ENST00000283871 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
HGD-201ENST00000283871 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
HGD-201ENST00000283871 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
HGD-201ENST00000283871 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
HGD-201ENST00000283871 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
HGD-201ENST00000283871 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
HGD-201ENST00000283871 SOGA1O94964 1423 aa13.6□□□□□ -0.23
HGD-201ENST00000283871 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
HGD-201ENST00000283871 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
HGD-201ENST00000283871 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.243e-13■■□□□ 13.3
HGD-201ENST00000283871 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
HGD-201ENST00000283871 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
HGD-201ENST00000283871 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
HGD-201ENST00000283871 EEA1Q15075 1411 aa13.52□□□□□ -0.25
HGD-201ENST00000283871 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
HGD-201ENST00000283871 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
HGD-201ENST00000283871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
HGD-201ENST00000283871 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
HGD-201ENST00000283871 GOLGA3Q08378 1498 aa13.45□□□□□ -0.26
HGD-201ENST00000283871 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
HGD-201ENST00000283871 TTBK1Q5TCY1 1321 aaPredicted RBP13.43□□□□□ -0.26
HGD-201ENST00000283871 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
HGD-201ENST00000283871 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
HGD-201ENST00000283871 KIF21BO75037 1637 aa13.41□□□□□ -0.26
HGD-201ENST00000283871 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
HGD-201ENST00000283871 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
HGD-201ENST00000283871 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
HGD-201ENST00000283871 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
HGD-201ENST00000283871 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
HGD-201ENST00000283871 CLIP1P30622 1438 aa13.28□□□□□ -0.28
HGD-201ENST00000283871 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.28
HGD-201ENST00000283871 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
HGD-201ENST00000283871 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
HGD-201ENST00000283871 HMGXB3Q12766 1538 aa13.21□□□□□ -0.3
HGD-201ENST00000283871 MYT1Q01538 1121 aa13.19□□□□□ -0.3
HGD-201ENST00000283871 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
HGD-201ENST00000283871 CUX1P39880 1505 aa13.16□□□□□ -0.3
HGD-201ENST00000283871 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
HGD-201ENST00000283871 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
HGD-201ENST00000283871 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
HGD-201ENST00000283871 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
HGD-201ENST00000283871 RANGAP1P46060 587 aaPredicted RBP13.13□□□□□ -0.31
HGD-201ENST00000283871 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
HGD-201ENST00000283871 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
HGD-201ENST00000283871 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
HGD-201ENST00000283871 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
HGD-201ENST00000283871 APLP2Q06481 763 aa13.1□□□□□ -0.31
HGD-201ENST00000283871 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
HGD-201ENST00000283871 CFTRP13569 1480 aa13.07□□□□□ -0.32
HGD-201ENST00000283871 KIF27Q86VH2 1401 aa13.04□□□□□ -0.32
HGD-201ENST00000283871 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
HGD-201ENST00000283871 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
HGD-201ENST00000283871 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
HGD-201ENST00000283871 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.34
HGD-201ENST00000283871 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
HGD-201ENST00000283871 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
HGD-201ENST00000283871 CUX2O14529 1486 aa12.93□□□□□ -0.34
HGD-201ENST00000283871 MIER1Q8N108 512 aa12.92□□□□□ -0.34
HGD-201ENST00000283871 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
HGD-201ENST00000283871 IGF1RP08069 1367 aa12.89□□□□□ -0.35
HGD-201ENST00000283871 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
HGD-201ENST00000283871 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
HGD-201ENST00000283871 YTHDC1Q96MU7 727 aaKnown RBP12.88□□□□□ -0.35
HGD-201ENST00000283871 TIAM1Q13009 1591 aa12.87□□□□□ -0.35
HGD-201ENST00000283871 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
HGD-201ENST00000283871 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
HGD-201ENST00000283871 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
HGD-201ENST00000283871 MAP3K1Q13233 1512 aa12.83□□□□□ -0.36
HGD-201ENST00000283871 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.36
HGD-201ENST00000283871 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
HGD-201ENST00000283871 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms