RNA–Protein interactions for RNA: ENST00000345201.6

PTK7-203, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 4,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-203ENST00000345201 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
PTK7-203ENST00000345201 DCAF8L2P0C7V8 631 aa25.28■■□□□ 1.64
PTK7-203ENST00000345201 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
PTK7-203ENST00000345201 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
PTK7-203ENST00000345201 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
PTK7-203ENST00000345201 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
PTK7-203ENST00000345201 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
PTK7-203ENST00000345201 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
PTK7-203ENST00000345201 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
PTK7-203ENST00000345201 LOC105371045A0A1W2PR82 267 aa22.41■■□□□ 1.18
PTK7-203ENST00000345201 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
PTK7-203ENST00000345201 ABCC9O60706 1549 aa22.37■■□□□ 1.17
PTK7-203ENST00000345201 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
PTK7-203ENST00000345201 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
PTK7-203ENST00000345201 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
PTK7-203ENST00000345201 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.118e-8■■□□□ 13.3
PTK7-203ENST00000345201 UBTFP17480 764 aaKnown RBP21.98■■□□□ 1.11
PTK7-203ENST00000345201 CCDC180Q9P1Z9 1646 aa21.97■■□□□ 1.11
PTK7-203ENST00000345201 APLP2Q06481 763 aa21.94■■□□□ 1.1
PTK7-203ENST00000345201 HRCP23327 699 aa21.82■■□□□ 1.08
PTK7-203ENST00000345201 TRIM26Q12899 539 aaPredicted RBP21.82■■□□□ 1.08
PTK7-203ENST00000345201 SCRIBQ14160 1630 aa21.76■■□□□ 1.07
PTK7-203ENST00000345201 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
PTK7-203ENST00000345201 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.04
PTK7-203ENST00000345201 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
PTK7-203ENST00000345201 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
PTK7-203ENST00000345201 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
PTK7-203ENST00000345201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
PTK7-203ENST00000345201 HNRNPUL2Q1KMD3 747 aaKnown RBP21.32■■□□□ 1
PTK7-203ENST00000345201 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
PTK7-203ENST00000345201 ITGAEP38570 1179 aa21.22■□□□□ 0.99
PTK7-203ENST00000345201 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
PTK7-203ENST00000345201 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
PTK7-203ENST00000345201 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
PTK7-203ENST00000345201 NACADO15069 1562 aa21.04■□□□□ 0.96
PTK7-203ENST00000345201 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
PTK7-203ENST00000345201 CENPBP07199 599 aaPredicted RBP20.96■□□□□ 0.95
PTK7-203ENST00000345201 MROH2BQ7Z745 1585 aa20.86■□□□□ 0.93
PTK7-203ENST00000345201 P3H3Q8IVL6 736 aa20.77■□□□□ 0.92
PTK7-203ENST00000345201 DIEXFQ68CQ4 756 aaKnown RBP20.77■□□□□ 0.91
PTK7-203ENST00000345201 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
PTK7-203ENST00000345201 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
PTK7-203ENST00000345201 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
PTK7-203ENST00000345201 WIZO95785 1651 aa20.56■□□□□ 0.88
PTK7-203ENST00000345201 SOGA1O94964 1423 aa20.56■□□□□ 0.88
PTK7-203ENST00000345201 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
PTK7-203ENST00000345201 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
PTK7-203ENST00000345201 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
PTK7-203ENST00000345201 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
PTK7-203ENST00000345201 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
PTK7-203ENST00000345201 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
PTK7-203ENST00000345201 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
PTK7-203ENST00000345201 CLIP1P30622 1438 aa20.48■□□□□ 0.87
PTK7-203ENST00000345201 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
PTK7-203ENST00000345201 FBLN2P98095 1184 aa20.42■□□□□ 0.86
PTK7-203ENST00000345201 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
PTK7-203ENST00000345201 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
PTK7-203ENST00000345201 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
PTK7-203ENST00000345201 EEA1Q15075 1411 aa20.38■□□□□ 0.85
PTK7-203ENST00000345201 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
PTK7-203ENST00000345201 TRIM52Q96A61 297 aa20.33■□□□□ 0.84
PTK7-203ENST00000345201 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
PTK7-203ENST00000345201 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
PTK7-203ENST00000345201 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
PTK7-203ENST00000345201 NEFLP07196 543 aa20.21■□□□□ 0.83
PTK7-203ENST00000345201 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
PTK7-203ENST00000345201 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
PTK7-203ENST00000345201 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
PTK7-203ENST00000345201 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
PTK7-203ENST00000345201 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
PTK7-203ENST00000345201 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
PTK7-203ENST00000345201 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
PTK7-203ENST00000345201 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
PTK7-203ENST00000345201 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
PTK7-203ENST00000345201 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
PTK7-203ENST00000345201 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
PTK7-203ENST00000345201 MIER1Q8N108 512 aa20.03■□□□□ 0.8
PTK7-203ENST00000345201 CUX2O14529 1486 aa20.01■□□□□ 0.79
PTK7-203ENST00000345201 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
PTK7-203ENST00000345201 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
PTK7-203ENST00000345201 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
PTK7-203ENST00000345201 DDX10Q13206 875 aaKnown RBP19.96■□□□□ 0.79
PTK7-203ENST00000345201 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
PTK7-203ENST00000345201 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
PTK7-203ENST00000345201 BCANQ96GW7 911 aa19.95■□□□□ 0.78
PTK7-203ENST00000345201 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
PTK7-203ENST00000345201 ANP32CO43423 234 aa19.92■□□□□ 0.78
PTK7-203ENST00000345201 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
PTK7-203ENST00000345201 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
PTK7-203ENST00000345201 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
PTK7-203ENST00000345201 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
PTK7-203ENST00000345201 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
PTK7-203ENST00000345201 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
PTK7-203ENST00000345201 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
PTK7-203ENST00000345201 CCNB3Q8WWL7 1395 aa19.8■□□□□ 0.76
PTK7-203ENST00000345201 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
PTK7-203ENST00000345201 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.74
PTK7-203ENST00000345201 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
PTK7-203ENST00000345201 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
PTK7-203ENST00000345201 NCAPD3P42695 1498 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms