RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 NISCHQ9Y2I1 1504 aa42.61■■■■■ 4.41
HDAC10-204ENST00000429374 CCDC180Q9P1Z9 1646 aa37.15■■■■□ 3.54
HDAC10-204ENST00000429374 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
HDAC10-204ENST00000429374 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
HDAC10-204ENST00000429374 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
HDAC10-204ENST00000429374 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
HDAC10-204ENST00000429374 ABCC9O60706 1549 aa34.69■■■■□ 3.14
HDAC10-204ENST00000429374 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
HDAC10-204ENST00000429374 NACADO15069 1562 aa34.53■■■■□ 3.12
HDAC10-204ENST00000429374 RB1CC1Q8TDY2 1594 aa34.15■■■■□ 3.06
HDAC10-204ENST00000429374 SCRIBQ14160 1630 aa33.98■■■■□ 3.03
HDAC10-204ENST00000429374 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
HDAC10-204ENST00000429374 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
HDAC10-204ENST00000429374 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
HDAC10-204ENST00000429374 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
HDAC10-204ENST00000429374 CECR2Q9BXF3 1484 aa32.98■■■□□ 2.87
HDAC10-204ENST00000429374 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
HDAC10-204ENST00000429374 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
HDAC10-204ENST00000429374 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.838e-8■■□□□ 13.3
HDAC10-204ENST00000429374 SMARCA4P51532 1647 aa32.7■■■□□ 2.82
HDAC10-204ENST00000429374 WIZO95785 1651 aa32.59■■■□□ 2.81
HDAC10-204ENST00000429374 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
HDAC10-204ENST00000429374 TOP2AP11388 1531 aaKnown RBP32.33■■■□□ 2.77
HDAC10-204ENST00000429374 CHIC1Q5VXU3 224 aa32.29■■■□□ 2.76
HDAC10-204ENST00000429374 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
HDAC10-204ENST00000429374 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
HDAC10-204ENST00000429374 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
HDAC10-204ENST00000429374 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
HDAC10-204ENST00000429374 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
HDAC10-204ENST00000429374 NCAPD3P42695 1498 aa31.86■■■□□ 2.69
HDAC10-204ENST00000429374 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
HDAC10-204ENST00000429374 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
HDAC10-204ENST00000429374 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
HDAC10-204ENST00000429374 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
HDAC10-204ENST00000429374 CFTRP13569 1480 aa31.18■■■□□ 2.58
HDAC10-204ENST00000429374 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
HDAC10-204ENST00000429374 PRDM2Q13029 1718 aa31.1■■■□□ 2.57
HDAC10-204ENST00000429374 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
HDAC10-204ENST00000429374 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
HDAC10-204ENST00000429374 LOC105371045A0A1W2PR82 267 aa30.95■■■□□ 2.55
HDAC10-204ENST00000429374 EEA1Q15075 1411 aa30.95■■■□□ 2.55
HDAC10-204ENST00000429374 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
HDAC10-204ENST00000429374 BIVM-ERCC5R4GMW8 1640 aa30.9■■■□□ 2.54
HDAC10-204ENST00000429374 FAM9AQ8IZU1 332 aaPredicted RBP30.84■■■□□ 2.53
HDAC10-204ENST00000429374 SOGA1O94964 1423 aa30.75■■■□□ 2.51
HDAC10-204ENST00000429374 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
HDAC10-204ENST00000429374 CUX1P39880 1505 aa30.72■■■□□ 2.51
HDAC10-204ENST00000429374 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.5
HDAC10-204ENST00000429374 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
HDAC10-204ENST00000429374 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
HDAC10-204ENST00000429374 NESP48681 1621 aa30.52■■■□□ 2.48
HDAC10-204ENST00000429374 KIF21BO75037 1637 aa30.47■■■□□ 2.47
HDAC10-204ENST00000429374 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
HDAC10-204ENST00000429374 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
HDAC10-204ENST00000429374 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
HDAC10-204ENST00000429374 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
HDAC10-204ENST00000429374 GOLGA3Q08378 1498 aa30.42■■■□□ 2.46
HDAC10-204ENST00000429374 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
HDAC10-204ENST00000429374 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
HDAC10-204ENST00000429374 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
HDAC10-204ENST00000429374 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
HDAC10-204ENST00000429374 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.44
HDAC10-204ENST00000429374 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
HDAC10-204ENST00000429374 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
HDAC10-204ENST00000429374 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
HDAC10-204ENST00000429374 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
HDAC10-204ENST00000429374 POLA1P09884 1462 aaPredicted RBP30.18■■■□□ 2.42
HDAC10-204ENST00000429374 UBTFP17480 764 aaKnown RBP30.18■■■□□ 2.42
HDAC10-204ENST00000429374 CUX2O14529 1486 aa30.17■■■□□ 2.42
HDAC10-204ENST00000429374 CEP162Q5TB80 1403 aa30.17■■■□□ 2.42
HDAC10-204ENST00000429374 ABCA10Q8WWZ4 1543 aa30.16■■■□□ 2.42
HDAC10-204ENST00000429374 RAPGEF2Q9Y4G8 1499 aa30.13■■■□□ 2.41
HDAC10-204ENST00000429374 IGF1RP08069 1367 aa30.06■■■□□ 2.4
HDAC10-204ENST00000429374 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
HDAC10-204ENST00000429374 MRC2Q9UBG0 1479 aa30.03■■■□□ 2.4
HDAC10-204ENST00000429374 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.39
HDAC10-204ENST00000429374 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
HDAC10-204ENST00000429374 CLIP1P30622 1438 aa29.9■■■□□ 2.38
HDAC10-204ENST00000429374 CUL7Q14999 1698 aa29.89■■■□□ 2.37
HDAC10-204ENST00000429374 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
HDAC10-204ENST00000429374 WDR62O43379 1518 aa29.88■■■□□ 2.37
HDAC10-204ENST00000429374 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
HDAC10-204ENST00000429374 ABCA5Q8WWZ7 1642 aa29.88■■■□□ 2.37
HDAC10-204ENST00000429374 GAPVD1Q14C86 1478 aa29.78■■■□□ 2.36
HDAC10-204ENST00000429374 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
HDAC10-204ENST00000429374 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.35
HDAC10-204ENST00000429374 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
HDAC10-204ENST00000429374 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
HDAC10-204ENST00000429374 VPS8Q8N3P4 1428 aa29.71■■■□□ 2.35
HDAC10-204ENST00000429374 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.34
HDAC10-204ENST00000429374 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
HDAC10-204ENST00000429374 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
HDAC10-204ENST00000429374 CTTNBP2Q8WZ74 1663 aa29.55■■■□□ 2.32
HDAC10-204ENST00000429374 ARHGAP35Q9NRY4 1499 aa29.54■■■□□ 2.32
HDAC10-204ENST00000429374 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
HDAC10-204ENST00000429374 FHAD1B1AJZ9 1412 aa29.5■■■□□ 2.31
HDAC10-204ENST00000429374 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.313e-7■■■□□ 15.1
HDAC10-204ENST00000429374 ADAMTS12P58397 1594 aa29.45■■■□□ 2.3
HDAC10-204ENST00000429374 EFCAB5A4FU69 1503 aa29.44■■■□□ 2.3
HDAC10-204ENST00000429374 RANGAP1P46060 587 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms