RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
PTK7-216ENST00000489707 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
PTK7-216ENST00000489707 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
PTK7-216ENST00000489707 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
PTK7-216ENST00000489707 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
PTK7-216ENST00000489707 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.99
PTK7-216ENST00000489707 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
PTK7-216ENST00000489707 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
PTK7-216ENST00000489707 NACADO15069 1562 aa26.82■■□□□ 1.88
PTK7-216ENST00000489707 ABCC9O60706 1549 aa26.74■■□□□ 1.87
PTK7-216ENST00000489707 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
PTK7-216ENST00000489707 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
PTK7-216ENST00000489707 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
PTK7-216ENST00000489707 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
PTK7-216ENST00000489707 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
PTK7-216ENST00000489707 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
PTK7-216ENST00000489707 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
PTK7-216ENST00000489707 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
PTK7-216ENST00000489707 WIZO95785 1651 aa25.73■■□□□ 1.71
PTK7-216ENST00000489707 SMARCA4P51532 1647 aa25.64■■□□□ 1.69
PTK7-216ENST00000489707 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
PTK7-216ENST00000489707 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
PTK7-216ENST00000489707 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
PTK7-216ENST00000489707 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.648e-8■■□□□ 13.3
PTK7-216ENST00000489707 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
PTK7-216ENST00000489707 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
PTK7-216ENST00000489707 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
PTK7-216ENST00000489707 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.63
PTK7-216ENST00000489707 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
PTK7-216ENST00000489707 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
PTK7-216ENST00000489707 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PTK7-216ENST00000489707 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
PTK7-216ENST00000489707 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PTK7-216ENST00000489707 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
PTK7-216ENST00000489707 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
PTK7-216ENST00000489707 EEA1Q15075 1411 aa24.74■■□□□ 1.55
PTK7-216ENST00000489707 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
PTK7-216ENST00000489707 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
PTK7-216ENST00000489707 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
PTK7-216ENST00000489707 HRCP23327 699 aa24.61■■□□□ 1.53
PTK7-216ENST00000489707 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
PTK7-216ENST00000489707 SOGA1O94964 1423 aa24.52■■□□□ 1.52
PTK7-216ENST00000489707 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
PTK7-216ENST00000489707 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
PTK7-216ENST00000489707 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
PTK7-216ENST00000489707 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
PTK7-216ENST00000489707 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
PTK7-216ENST00000489707 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
PTK7-216ENST00000489707 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PTK7-216ENST00000489707 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
PTK7-216ENST00000489707 KIF21BO75037 1637 aa24.36■■□□□ 1.49
PTK7-216ENST00000489707 CFTRP13569 1480 aa24.33■■□□□ 1.49
PTK7-216ENST00000489707 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
PTK7-216ENST00000489707 CEP162Q5TB80 1403 aa24.33■■□□□ 1.48
PTK7-216ENST00000489707 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
PTK7-216ENST00000489707 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
PTK7-216ENST00000489707 CUX1P39880 1505 aa24.15■■□□□ 1.46
PTK7-216ENST00000489707 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
PTK7-216ENST00000489707 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
PTK7-216ENST00000489707 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
PTK7-216ENST00000489707 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
PTK7-216ENST00000489707 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
PTK7-216ENST00000489707 CLIP1P30622 1438 aa24■■□□□ 1.43
PTK7-216ENST00000489707 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
PTK7-216ENST00000489707 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
PTK7-216ENST00000489707 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
PTK7-216ENST00000489707 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PTK7-216ENST00000489707 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
PTK7-216ENST00000489707 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
PTK7-216ENST00000489707 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
PTK7-216ENST00000489707 CUX2O14529 1486 aa23.79■■□□□ 1.4
PTK7-216ENST00000489707 APLP2Q06481 763 aa23.76■■□□□ 1.39
PTK7-216ENST00000489707 IGF1RP08069 1367 aa23.68■■□□□ 1.38
PTK7-216ENST00000489707 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
PTK7-216ENST00000489707 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
PTK7-216ENST00000489707 NESP48681 1621 aa23.65■■□□□ 1.38
PTK7-216ENST00000489707 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
PTK7-216ENST00000489707 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
PTK7-216ENST00000489707 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
PTK7-216ENST00000489707 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
PTK7-216ENST00000489707 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
PTK7-216ENST00000489707 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
PTK7-216ENST00000489707 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
PTK7-216ENST00000489707 CUL7Q14999 1698 aa23.56■■□□□ 1.36
PTK7-216ENST00000489707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
PTK7-216ENST00000489707 ARHGAP35Q9NRY4 1499 aa23.53■■□□□ 1.36
PTK7-216ENST00000489707 WDR97A6NE52 1622 aa23.52■■□□□ 1.35
PTK7-216ENST00000489707 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
PTK7-216ENST00000489707 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
PTK7-216ENST00000489707 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
PTK7-216ENST00000489707 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
PTK7-216ENST00000489707 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
PTK7-216ENST00000489707 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
PTK7-216ENST00000489707 EFCAB5A4FU69 1503 aa23.37■■□□□ 1.33
PTK7-216ENST00000489707 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
PTK7-216ENST00000489707 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
PTK7-216ENST00000489707 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
PTK7-216ENST00000489707 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
PTK7-216ENST00000489707 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
PTK7-216ENST00000489707 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms