RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
FLOT1-209ENST00000476729 ABCC9O60706 1549 aa34.48■■■■□ 3.11
FLOT1-209ENST00000476729 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
FLOT1-209ENST00000476729 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
FLOT1-209ENST00000476729 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
FLOT1-209ENST00000476729 NACADO15069 1562 aa32.46■■■□□ 2.79
FLOT1-209ENST00000476729 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
FLOT1-209ENST00000476729 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.742e-17■■□□□ 13.3
FLOT1-209ENST00000476729 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
FLOT1-209ENST00000476729 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
FLOT1-209ENST00000476729 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
FLOT1-209ENST00000476729 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
FLOT1-209ENST00000476729 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
FLOT1-209ENST00000476729 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
FLOT1-209ENST00000476729 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
FLOT1-209ENST00000476729 CC2D2AQ9P2K1 1620 aa31.08■■■□□ 2.57
FLOT1-209ENST00000476729 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
FLOT1-209ENST00000476729 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
FLOT1-209ENST00000476729 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
FLOT1-209ENST00000476729 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
FLOT1-209ENST00000476729 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
FLOT1-209ENST00000476729 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
FLOT1-209ENST00000476729 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
FLOT1-209ENST00000476729 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
FLOT1-209ENST00000476729 DNAJC5Q9H3Z4 198 aa29.72■■■□□ 2.35
FLOT1-209ENST00000476729 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.35
FLOT1-209ENST00000476729 CUX2O14529 1486 aa29.65■■■□□ 2.34
FLOT1-209ENST00000476729 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
FLOT1-209ENST00000476729 NESP48681 1621 aa29.6■■■□□ 2.33
FLOT1-209ENST00000476729 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
FLOT1-209ENST00000476729 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
FLOT1-209ENST00000476729 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
FLOT1-209ENST00000476729 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
FLOT1-209ENST00000476729 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
FLOT1-209ENST00000476729 WIZO95785 1651 aa29.15■■■□□ 2.26
FLOT1-209ENST00000476729 KIF21AQ7Z4S6 1674 aa29.13■■■□□ 2.25
FLOT1-209ENST00000476729 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
FLOT1-209ENST00000476729 MRC2Q9UBG0 1479 aa28.93■■■□□ 2.22
FLOT1-209ENST00000476729 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
FLOT1-209ENST00000476729 WDR62O43379 1518 aa28.84■■■□□ 2.21
FLOT1-209ENST00000476729 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
FLOT1-209ENST00000476729 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
FLOT1-209ENST00000476729 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
FLOT1-209ENST00000476729 CFTRP13569 1480 aa28.75■■■□□ 2.19
FLOT1-209ENST00000476729 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
FLOT1-209ENST00000476729 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
FLOT1-209ENST00000476729 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
FLOT1-209ENST00000476729 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
FLOT1-209ENST00000476729 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
FLOT1-209ENST00000476729 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
FLOT1-209ENST00000476729 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
FLOT1-209ENST00000476729 IFT140Q96RY7 1462 aa28.23■■■□□ 2.11
FLOT1-209ENST00000476729 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
FLOT1-209ENST00000476729 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
FLOT1-209ENST00000476729 EIF4G3O43432 1585 aaKnown RBP28.03■■■□□ 2.08
FLOT1-209ENST00000476729 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
FLOT1-209ENST00000476729 RIMBP3CA6NJZ7 1639 aa27.95■■■□□ 2.06
FLOT1-209ENST00000476729 RIMBP3BA6NNM3 1639 aa27.95■■■□□ 2.06
FLOT1-209ENST00000476729 RIMBP3Q9UFD9 1639 aa27.95■■■□□ 2.06
FLOT1-209ENST00000476729 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
FLOT1-209ENST00000476729 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
FLOT1-209ENST00000476729 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
FLOT1-209ENST00000476729 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
FLOT1-209ENST00000476729 FBLN2P98095 1184 aa27.86■■■□□ 2.05
FLOT1-209ENST00000476729 SOGA1O94964 1423 aa27.84■■■□□ 2.05
FLOT1-209ENST00000476729 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
FLOT1-209ENST00000476729 CHD1O14646 1710 aa27.8■■■□□ 2.04
FLOT1-209ENST00000476729 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
FLOT1-209ENST00000476729 CYB5RLQ6IPT4 315 aa27.74■■■□□ 2.03
FLOT1-209ENST00000476729 CUX1P39880 1505 aa27.73■■■□□ 2.03
FLOT1-209ENST00000476729 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
FLOT1-209ENST00000476729 SNAPC4Q5SXM2 1469 aa27.69■■■□□ 2.02
FLOT1-209ENST00000476729 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
FLOT1-209ENST00000476729 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
FLOT1-209ENST00000476729 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
FLOT1-209ENST00000476729 GRIN2BQ13224 1484 aa27.57■■■□□ 2
FLOT1-209ENST00000476729 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
FLOT1-209ENST00000476729 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
FLOT1-209ENST00000476729 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
FLOT1-209ENST00000476729 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
FLOT1-209ENST00000476729 GAPVD1Q14C86 1478 aa27.48■■□□□ 1.99
FLOT1-209ENST00000476729 TRHP20396 242 aaPredicted RBP27.45■■□□□ 1.98
FLOT1-209ENST00000476729 ABCA10Q8WWZ4 1543 aa27.43■■□□□ 1.98
FLOT1-209ENST00000476729 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
FLOT1-209ENST00000476729 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
FLOT1-209ENST00000476729 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
FLOT1-209ENST00000476729 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
FLOT1-209ENST00000476729 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
FLOT1-209ENST00000476729 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
FLOT1-209ENST00000476729 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
FLOT1-209ENST00000476729 FHAD1B1AJZ9 1412 aa27.13■■□□□ 1.93
FLOT1-209ENST00000476729 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
FLOT1-209ENST00000476729 NUP160Q12769 1436 aa27.12■■□□□ 1.93
FLOT1-209ENST00000476729 ERCC6L2Q5T890 1561 aa27.12■■□□□ 1.93
FLOT1-209ENST00000476729 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
FLOT1-209ENST00000476729 SHROOM2Q13796 1616 aa26.96■■□□□ 1.91
FLOT1-209ENST00000476729 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
FLOT1-209ENST00000476729 JPH4Q96JJ6 628 aa26.89■■□□□ 1.9
FLOT1-209ENST00000476729 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
FLOT1-209ENST00000476729 IGF1RP08069 1367 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms