RNA–Protein interactions for RNA: ENST00000498366.5

HDAC10-221, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 2,153 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-221ENST00000498366 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
HDAC10-221ENST00000498366 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
HDAC10-221ENST00000498366 ABCC9O60706 1549 aa36.09■■■■□ 3.37
HDAC10-221ENST00000498366 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
HDAC10-221ENST00000498366 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.31
HDAC10-221ENST00000498366 DCAF1Q9Y4B6 1507 aa35.53■■■■□ 3.28
HDAC10-221ENST00000498366 MYO15BQ96JP2 1530 aa35.26■■■■□ 3.24
HDAC10-221ENST00000498366 NACADO15069 1562 aa35.21■■■■□ 3.23
HDAC10-221ENST00000498366 RB1CC1Q8TDY2 1594 aa35.02■■■■□ 3.2
HDAC10-221ENST00000498366 SHROOM4Q9ULL8 1493 aa34.89■■■■□ 3.18
HDAC10-221ENST00000498366 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
HDAC10-221ENST00000498366 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
HDAC10-221ENST00000498366 BICRAQ9NZM4 1560 aa34■■■■□ 3.03
HDAC10-221ENST00000498366 PABPN1Q86U42 306 aaKnown RBP eCLIP33.96■■■■□ 3.038e-8■■□□□ 13.3
HDAC10-221ENST00000498366 CECR2Q9BXF3 1484 aa33.51■■■□□ 2.96
HDAC10-221ENST00000498366 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
HDAC10-221ENST00000498366 MROH2BQ7Z745 1585 aa33.26■■■□□ 2.91
HDAC10-221ENST00000498366 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.91
HDAC10-221ENST00000498366 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
HDAC10-221ENST00000498366 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
HDAC10-221ENST00000498366 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.87
HDAC10-221ENST00000498366 WIZO95785 1651 aa32.98■■■□□ 2.87
HDAC10-221ENST00000498366 PEG3Q9GZU2 1588 aa32.76■■■□□ 2.84
HDAC10-221ENST00000498366 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
HDAC10-221ENST00000498366 SMARCA2P51531 1590 aa32.69■■■□□ 2.82
HDAC10-221ENST00000498366 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
HDAC10-221ENST00000498366 TOP2AP11388 1531 aaKnown RBP32.58■■■□□ 2.81
HDAC10-221ENST00000498366 BAZ1BQ9UIG0 1483 aaKnown RBP32.53■■■□□ 2.8
HDAC10-221ENST00000498366 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
HDAC10-221ENST00000498366 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
HDAC10-221ENST00000498366 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.76
HDAC10-221ENST00000498366 DNAJC5BQ9UF47 199 aa32.25■■■□□ 2.75
HDAC10-221ENST00000498366 CFTRP13569 1480 aa31.68■■■□□ 2.66
HDAC10-221ENST00000498366 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
HDAC10-221ENST00000498366 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
HDAC10-221ENST00000498366 NESP48681 1621 aa31.57■■■□□ 2.64
HDAC10-221ENST00000498366 PRDM2Q13029 1718 aa31.5■■■□□ 2.63
HDAC10-221ENST00000498366 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
HDAC10-221ENST00000498366 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
HDAC10-221ENST00000498366 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
HDAC10-221ENST00000498366 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
HDAC10-221ENST00000498366 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.6
HDAC10-221ENST00000498366 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
HDAC10-221ENST00000498366 SYNJ1O43426 1573 aa31.2■■■□□ 2.59
HDAC10-221ENST00000498366 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
HDAC10-221ENST00000498366 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
HDAC10-221ENST00000498366 CUX1P39880 1505 aa31.12■■■□□ 2.57
HDAC10-221ENST00000498366 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
HDAC10-221ENST00000498366 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
HDAC10-221ENST00000498366 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
HDAC10-221ENST00000498366 URB2Q14146 1524 aaKnown RBP30.96■■■□□ 2.55
HDAC10-221ENST00000498366 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.54
HDAC10-221ENST00000498366 TOPBP1Q92547 1522 aa30.93■■■□□ 2.54
HDAC10-221ENST00000498366 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
HDAC10-221ENST00000498366 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
HDAC10-221ENST00000498366 FAM9AQ8IZU1 332 aaPredicted RBP30.82■■■□□ 2.52
HDAC10-221ENST00000498366 SOGA1O94964 1423 aa30.8■■■□□ 2.52
HDAC10-221ENST00000498366 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.51
HDAC10-221ENST00000498366 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
HDAC10-221ENST00000498366 WDR62O43379 1518 aa30.73■■■□□ 2.51
HDAC10-221ENST00000498366 RUSC2Q8N2Y8 1516 aa30.72■■■□□ 2.51
HDAC10-221ENST00000498366 RAD54L2Q9Y4B4 1467 aa30.67■■■□□ 2.5
HDAC10-221ENST00000498366 EEA1Q15075 1411 aa30.57■■■□□ 2.48
HDAC10-221ENST00000498366 CUX2O14529 1486 aa30.57■■■□□ 2.48
HDAC10-221ENST00000498366 ABCA10Q8WWZ4 1543 aa30.53■■■□□ 2.48
HDAC10-221ENST00000498366 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
HDAC10-221ENST00000498366 TARBP1Q13395 1621 aaKnown RBP30.51■■■□□ 2.47
HDAC10-221ENST00000498366 CSRNP3Q8WYN3 585 aa30.5■■■□□ 2.47
HDAC10-221ENST00000498366 WDR97A6NE52 1622 aa30.49■■■□□ 2.47
HDAC10-221ENST00000498366 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
HDAC10-221ENST00000498366 EHMT2Q96KQ7 1210 aa30.44■■■□□ 2.46
HDAC10-221ENST00000498366 TDRD9Q8NDG6 1382 aaKnown RBP30.42■■■□□ 2.46
HDAC10-221ENST00000498366 IFT140Q96RY7 1462 aa30.41■■■□□ 2.46
HDAC10-221ENST00000498366 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
HDAC10-221ENST00000498366 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
HDAC10-221ENST00000498366 IGF1RP08069 1367 aa30.31■■■□□ 2.44
HDAC10-221ENST00000498366 GAPVD1Q14C86 1478 aa30.3■■■□□ 2.44
HDAC10-221ENST00000498366 AQRO60306 1485 aaKnown RBP eCLIP30.29■■■□□ 2.443e-7■■■□□ 15.1
HDAC10-221ENST00000498366 KIF21BO75037 1637 aa30.23■■■□□ 2.43
HDAC10-221ENST00000498366 PRXQ9BXM0 1461 aa30.22■■■□□ 2.43
HDAC10-221ENST00000498366 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.42
HDAC10-221ENST00000498366 RAPGEF2Q9Y4G8 1499 aa30.18■■■□□ 2.42
HDAC10-221ENST00000498366 PBRM1Q86U86 1689 aa30.17■■■□□ 2.42
HDAC10-221ENST00000498366 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
HDAC10-221ENST00000498366 GOLGA3Q08378 1498 aa30.17■■■□□ 2.42
HDAC10-221ENST00000498366 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
HDAC10-221ENST00000498366 GRIN2BQ13224 1484 aa30.11■■■□□ 2.41
HDAC10-221ENST00000498366 UBTFP17480 764 aaKnown RBP30.1■■■□□ 2.41
HDAC10-221ENST00000498366 CUL7Q14999 1698 aa30.1■■■□□ 2.41
HDAC10-221ENST00000498366 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
HDAC10-221ENST00000498366 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
HDAC10-221ENST00000498366 ADAMTS12P58397 1594 aa29.97■■■□□ 2.39
HDAC10-221ENST00000498366 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
HDAC10-221ENST00000498366 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
HDAC10-221ENST00000498366 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
HDAC10-221ENST00000498366 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
HDAC10-221ENST00000498366 RANGAP1P46060 587 aaPredicted RBP29.8■■■□□ 2.36
HDAC10-221ENST00000498366 HRCP23327 699 aa29.79■■■□□ 2.36
HDAC10-221ENST00000498366 FBLN2P98095 1184 aa29.78■■■□□ 2.36
HDAC10-221ENST00000498366 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms