RNA–Protein interactions for RNA: ENST00000553652.5

CKB-204, Transcript of creatine kinase B, humanhuman

TSL 5

Gene CKB, Length 1,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-204ENST00000553652 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
CKB-204ENST00000553652 ABCC9O60706 1549 aa38.33■■■■□ 3.73
CKB-204ENST00000553652 CCDC180Q9P1Z9 1646 aa37.54■■■■□ 3.6
CKB-204ENST00000553652 DNAJC5BQ9UF47 199 aa36.59■■■■□ 3.45
CKB-204ENST00000553652 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
CKB-204ENST00000553652 NACADO15069 1562 aa35.73■■■■□ 3.31
CKB-204ENST00000553652 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.293e-6■■□□□ 13.3
CKB-204ENST00000553652 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
CKB-204ENST00000553652 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
CKB-204ENST00000553652 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
CKB-204ENST00000553652 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
CKB-204ENST00000553652 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
CKB-204ENST00000553652 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
CKB-204ENST00000553652 DCAF1Q9Y4B6 1507 aa34.62■■■■□ 3.13
CKB-204ENST00000553652 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
CKB-204ENST00000553652 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
CKB-204ENST00000553652 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
CKB-204ENST00000553652 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
CKB-204ENST00000553652 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
CKB-204ENST00000553652 CUX2O14529 1486 aa33.39■■■□□ 2.94
CKB-204ENST00000553652 ERCC6Q03468 1493 aa33.25■■■□□ 2.91
CKB-204ENST00000553652 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
CKB-204ENST00000553652 ATAD2BQ9ULI0 1458 aa32.76■■■□□ 2.84
CKB-204ENST00000553652 SMARCA2P51531 1590 aa32.67■■■□□ 2.82
CKB-204ENST00000553652 NESP48681 1621 aa32.66■■■□□ 2.82
CKB-204ENST00000553652 HMGXB3Q12766 1538 aa32.65■■■□□ 2.82
CKB-204ENST00000553652 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
CKB-204ENST00000553652 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
CKB-204ENST00000553652 BAZ1BQ9UIG0 1483 aaKnown RBP32.45■■■□□ 2.79
CKB-204ENST00000553652 THOC2Q8NI27 1593 aaKnown RBP32.45■■■□□ 2.78
CKB-204ENST00000553652 LAMC3Q9Y6N6 1575 aa32.37■■■□□ 2.77
CKB-204ENST00000553652 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
CKB-204ENST00000553652 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
CKB-204ENST00000553652 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
CKB-204ENST00000553652 PEG3Q9GZU2 1588 aa32.18■■■□□ 2.74
CKB-204ENST00000553652 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
CKB-204ENST00000553652 MRC2Q9UBG0 1479 aa31.99■■■□□ 2.71
CKB-204ENST00000553652 CADPSQ9ULU8 1353 aa31.98■■■□□ 2.71
CKB-204ENST00000553652 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
CKB-204ENST00000553652 WDR62O43379 1518 aa31.88■■■□□ 2.69
CKB-204ENST00000553652 OSCARQ8IYS5 282 aa31.84■■■□□ 2.69
CKB-204ENST00000553652 WIZO95785 1651 aa31.76■■■□□ 2.68
CKB-204ENST00000553652 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
CKB-204ENST00000553652 FANCD2Q9BXW9 1451 aa31.6■■■□□ 2.65
CKB-204ENST00000553652 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
CKB-204ENST00000553652 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
CKB-204ENST00000553652 CFTRP13569 1480 aa31.41■■■□□ 2.62
CKB-204ENST00000553652 RIMBP3CA6NJZ7 1639 aa31.34■■■□□ 2.61
CKB-204ENST00000553652 RIMBP3BA6NNM3 1639 aa31.34■■■□□ 2.61
CKB-204ENST00000553652 RIMBP3Q9UFD9 1639 aa31.34■■■□□ 2.61
CKB-204ENST00000553652 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
CKB-204ENST00000553652 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
CKB-204ENST00000553652 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
CKB-204ENST00000553652 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
CKB-204ENST00000553652 TRHP20396 242 aaPredicted RBP31.09■■■□□ 2.57
CKB-204ENST00000553652 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
CKB-204ENST00000553652 CCDC88BA6NC98 1476 aa31.03■■■□□ 2.56
CKB-204ENST00000553652 PRDM2Q13029 1718 aa30.96■■■□□ 2.55
CKB-204ENST00000553652 TOPBP1Q92547 1522 aa30.89■■■□□ 2.54
CKB-204ENST00000553652 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
CKB-204ENST00000553652 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
CKB-204ENST00000553652 FBLN2P98095 1184 aa30.83■■■□□ 2.53
CKB-204ENST00000553652 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
CKB-204ENST00000553652 ARAP1Q96P48 1450 aa30.81■■■□□ 2.52
CKB-204ENST00000553652 CHD1O14646 1710 aa30.76■■■□□ 2.51
CKB-204ENST00000553652 AQRO60306 1485 aaKnown RBP eCLIP30.74■■■□□ 2.518e-8■■■■□ 22.3
CKB-204ENST00000553652 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
CKB-204ENST00000553652 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
CKB-204ENST00000553652 POLA1P09884 1462 aaPredicted RBP30.51■■■□□ 2.48
CKB-204ENST00000553652 CHMP7Q8WUX9 453 aaPredicted RBP30.48■■■□□ 2.47
CKB-204ENST00000553652 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
CKB-204ENST00000553652 SOGA1O94964 1423 aa30.44■■■□□ 2.46
CKB-204ENST00000553652 RAD54L2Q9Y4B4 1467 aa30.42■■■□□ 2.46
CKB-204ENST00000553652 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
CKB-204ENST00000553652 SYNJ1O43426 1573 aa30.4■■■□□ 2.46
CKB-204ENST00000553652 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
CKB-204ENST00000553652 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
CKB-204ENST00000553652 MAGI1Q96QZ7 1491 aaPredicted RBP30.32■■■□□ 2.44
CKB-204ENST00000553652 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
CKB-204ENST00000553652 SYNJ2O15056 1496 aa30.23■■■□□ 2.43
CKB-204ENST00000553652 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
CKB-204ENST00000553652 GAPVD1Q14C86 1478 aa30.21■■■□□ 2.43
CKB-204ENST00000553652 BIVM-ERCC5R4GMW8 1640 aa30.09■■■□□ 2.41
CKB-204ENST00000553652 CUX1P39880 1505 aa30.04■■■□□ 2.4
CKB-204ENST00000553652 TOP2BQ02880 1626 aa30.03■■■□□ 2.4
CKB-204ENST00000553652 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.47e-7■■■■■ 52.5
CKB-204ENST00000553652 PBRM1Q86U86 1689 aa29.98■■■□□ 2.39
CKB-204ENST00000553652 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
CKB-204ENST00000553652 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
CKB-204ENST00000553652 ERCC6L2Q5T890 1561 aa29.82■■■□□ 2.36
CKB-204ENST00000553652 GRIN2AQ12879 1464 aa29.82■■■□□ 2.36
CKB-204ENST00000553652 ABCA5Q8WWZ7 1642 aa29.81■■■□□ 2.36
CKB-204ENST00000553652 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
CKB-204ENST00000553652 NUP160Q12769 1436 aa29.74■■■□□ 2.35
CKB-204ENST00000553652 KIF13AQ9H1H9 1805 aa29.66■■■□□ 2.34
CKB-204ENST00000553652 ADAMTS12P58397 1594 aa29.65■■■□□ 2.34
CKB-204ENST00000553652 SHROOM2Q13796 1616 aa29.64■■■□□ 2.34
CKB-204ENST00000553652 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CKB-204ENST00000553652 NPM1P06748 294 aaKnown RBP eCLIP29.62■■■□□ 2.33
CKB-204ENST00000553652 FAM69CQ0P6D2 419 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms