RNA–Protein interactions for RNA: ENST00000448072.5

HDAC10-205, Transcript of histone deacetylase 10, humanhuman

TSL 5 BASIC

Gene HDAC10, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-205ENST00000448072 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
HDAC10-205ENST00000448072 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
HDAC10-205ENST00000448072 ZCCHC6Q5VYS8 1495 aaKnown RBP32.67■■■□□ 2.82
HDAC10-205ENST00000448072 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
HDAC10-205ENST00000448072 DCAF1Q9Y4B6 1507 aa32.13■■■□□ 2.73
HDAC10-205ENST00000448072 ABCC9O60706 1549 aa32.1■■■□□ 2.73
HDAC10-205ENST00000448072 SHROOM4Q9ULL8 1493 aa31.82■■■□□ 2.69
HDAC10-205ENST00000448072 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
HDAC10-205ENST00000448072 NACADO15069 1562 aa31.58■■■□□ 2.65
HDAC10-205ENST00000448072 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
HDAC10-205ENST00000448072 SCRIBQ14160 1630 aa31.23■■■□□ 2.59
HDAC10-205ENST00000448072 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
HDAC10-205ENST00000448072 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
HDAC10-205ENST00000448072 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
HDAC10-205ENST00000448072 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.448e-8■■□□□ 13.3
HDAC10-205ENST00000448072 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
HDAC10-205ENST00000448072 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
HDAC10-205ENST00000448072 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
HDAC10-205ENST00000448072 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
HDAC10-205ENST00000448072 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
HDAC10-205ENST00000448072 WIZO95785 1651 aa29.84■■■□□ 2.37
HDAC10-205ENST00000448072 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
HDAC10-205ENST00000448072 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
HDAC10-205ENST00000448072 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
HDAC10-205ENST00000448072 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
HDAC10-205ENST00000448072 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
HDAC10-205ENST00000448072 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
HDAC10-205ENST00000448072 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
HDAC10-205ENST00000448072 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
HDAC10-205ENST00000448072 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
HDAC10-205ENST00000448072 HMGXB3Q12766 1538 aa29.1■■■□□ 2.25
HDAC10-205ENST00000448072 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
HDAC10-205ENST00000448072 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
HDAC10-205ENST00000448072 ABCC8Q09428 1581 aa28.63■■■□□ 2.17
HDAC10-205ENST00000448072 CFTRP13569 1480 aa28.51■■■□□ 2.15
HDAC10-205ENST00000448072 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
HDAC10-205ENST00000448072 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
HDAC10-205ENST00000448072 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
HDAC10-205ENST00000448072 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
HDAC10-205ENST00000448072 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
HDAC10-205ENST00000448072 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
HDAC10-205ENST00000448072 LOC105371045A0A1W2PR82 267 aa28.21■■■□□ 2.11
HDAC10-205ENST00000448072 NESP48681 1621 aa28.19■■■□□ 2.1
HDAC10-205ENST00000448072 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
HDAC10-205ENST00000448072 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
HDAC10-205ENST00000448072 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
HDAC10-205ENST00000448072 FANCD2Q9BXW9 1451 aa28.12■■■□□ 2.09
HDAC10-205ENST00000448072 CUX1P39880 1505 aa28.11■■■□□ 2.09
HDAC10-205ENST00000448072 SOGA1O94964 1423 aa28.09■■■□□ 2.09
HDAC10-205ENST00000448072 EEA1Q15075 1411 aa28.01■■■□□ 2.07
HDAC10-205ENST00000448072 RUSC2Q8N2Y8 1516 aa27.99■■■□□ 2.07
HDAC10-205ENST00000448072 PDS5BQ9NTI5 1447 aa27.96■■■□□ 2.07
HDAC10-205ENST00000448072 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
HDAC10-205ENST00000448072 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
HDAC10-205ENST00000448072 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
HDAC10-205ENST00000448072 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
HDAC10-205ENST00000448072 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
HDAC10-205ENST00000448072 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
HDAC10-205ENST00000448072 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
HDAC10-205ENST00000448072 URB2Q14146 1524 aaKnown RBP27.75■■■□□ 2.03
HDAC10-205ENST00000448072 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
HDAC10-205ENST00000448072 POLA1P09884 1462 aaPredicted RBP27.67■■■□□ 2.02
HDAC10-205ENST00000448072 CUX2O14529 1486 aa27.65■■■□□ 2.02
HDAC10-205ENST00000448072 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
HDAC10-205ENST00000448072 KIF21BO75037 1637 aa27.64■■■□□ 2.02
HDAC10-205ENST00000448072 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
HDAC10-205ENST00000448072 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
HDAC10-205ENST00000448072 UBTFP17480 764 aaKnown RBP27.58■■■□□ 2.01
HDAC10-205ENST00000448072 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
HDAC10-205ENST00000448072 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
HDAC10-205ENST00000448072 ERCC6Q03468 1493 aa27.53■■■□□ 2
HDAC10-205ENST00000448072 RAPGEF2Q9Y4G8 1499 aa27.51■■■□□ 2
HDAC10-205ENST00000448072 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
HDAC10-205ENST00000448072 IGF1RP08069 1367 aa27.46■■□□□ 1.99
HDAC10-205ENST00000448072 ERICH3Q5RHP9 1530 aa27.45■■□□□ 1.99
HDAC10-205ENST00000448072 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
HDAC10-205ENST00000448072 WDR62O43379 1518 aa27.43■■□□□ 1.98
HDAC10-205ENST00000448072 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
HDAC10-205ENST00000448072 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
HDAC10-205ENST00000448072 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
HDAC10-205ENST00000448072 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
HDAC10-205ENST00000448072 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
HDAC10-205ENST00000448072 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
HDAC10-205ENST00000448072 GAPVD1Q14C86 1478 aa27.29■■□□□ 1.96
HDAC10-205ENST00000448072 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
HDAC10-205ENST00000448072 CUL7Q14999 1698 aa27.23■■□□□ 1.95
HDAC10-205ENST00000448072 CLIP1P30622 1438 aa27.21■■□□□ 1.95
HDAC10-205ENST00000448072 RANGAP1P46060 587 aaPredicted RBP27.17■■□□□ 1.94
HDAC10-205ENST00000448072 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.943e-7■■■□□ 15.1
HDAC10-205ENST00000448072 ZNF608Q9ULD9 1512 aaPredicted RBP27.12■■□□□ 1.93
HDAC10-205ENST00000448072 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
HDAC10-205ENST00000448072 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
HDAC10-205ENST00000448072 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
HDAC10-205ENST00000448072 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
HDAC10-205ENST00000448072 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
HDAC10-205ENST00000448072 VPS8Q8N3P4 1428 aa26.96■■□□□ 1.91
HDAC10-205ENST00000448072 CTTNBP2Q8WZ74 1663 aa26.94■■□□□ 1.9
HDAC10-205ENST00000448072 PCGF6Q9BYE7 350 aa26.94■■□□□ 1.9
HDAC10-205ENST00000448072 ARAP1Q96P48 1450 aa26.92■■□□□ 1.9
HDAC10-205ENST00000448072 ARHGAP35Q9NRY4 1499 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms