RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 NISCHQ9Y2I1 1504 aa36.2■■■■□ 3.39
SLC43A1-201ENST00000278426 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
SLC43A1-201ENST00000278426 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.54
SLC43A1-201ENST00000278426 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.5
SLC43A1-201ENST00000278426 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
SLC43A1-201ENST00000278426 DCAF8L2P0C7V8 631 aa30.29■■■□□ 2.44
SLC43A1-201ENST00000278426 MYO15BQ96JP2 1530 aa30.1■■■□□ 2.41
SLC43A1-201ENST00000278426 HRCP23327 699 aa30.09■■■□□ 2.41
SLC43A1-201ENST00000278426 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
SLC43A1-201ENST00000278426 PCGF6Q9BYE7 350 aa29.75■■■□□ 2.35
SLC43A1-201ENST00000278426 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
SLC43A1-201ENST00000278426 DCAF1Q9Y4B6 1507 aa29.56■■■□□ 2.32
SLC43A1-201ENST00000278426 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
SLC43A1-201ENST00000278426 ABCC9O60706 1549 aa28.94■■■□□ 2.22
SLC43A1-201ENST00000278426 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.21
SLC43A1-201ENST00000278426 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
SLC43A1-201ENST00000278426 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
SLC43A1-201ENST00000278426 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
SLC43A1-201ENST00000278426 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
SLC43A1-201ENST00000278426 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
SLC43A1-201ENST00000278426 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
SLC43A1-201ENST00000278426 ZEB1P37275 1124 aaPredicted RBP28.42■■■□□ 2.14
SLC43A1-201ENST00000278426 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
SLC43A1-201ENST00000278426 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
SLC43A1-201ENST00000278426 SCAF1Q9H7N4 1312 aaKnown RBP28.22■■■□□ 2.11
SLC43A1-201ENST00000278426 NACADO15069 1562 aa28.19■■■□□ 2.1
SLC43A1-201ENST00000278426 PELP1Q8IZL8 1130 aaKnown RBP28.1■■■□□ 2.09
SLC43A1-201ENST00000278426 WIZO95785 1651 aa28.09■■■□□ 2.09
SLC43A1-201ENST00000278426 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
SLC43A1-201ENST00000278426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.78■■■□□ 2.04
SLC43A1-201ENST00000278426 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
SLC43A1-201ENST00000278426 CCER1Q8TC90 406 aaPredicted RBP27.66■■■□□ 2.02
SLC43A1-201ENST00000278426 ACIN1Q9UKV3 1341 aaKnown RBP27.64■■■□□ 2.02
SLC43A1-201ENST00000278426 NEUROD1Q13562 356 aa27.63■■■□□ 2.01
SLC43A1-201ENST00000278426 ABCC8Q09428 1581 aa27.61■■■□□ 2.01
SLC43A1-201ENST00000278426 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
SLC43A1-201ENST00000278426 TTBK1Q5TCY1 1321 aaPredicted RBP27.56■■■□□ 2
SLC43A1-201ENST00000278426 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
SLC43A1-201ENST00000278426 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
SLC43A1-201ENST00000278426 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
SLC43A1-201ENST00000278426 SMARCA2P51531 1590 aa27.45■■□□□ 1.98
SLC43A1-201ENST00000278426 SOGA1O94964 1423 aa27.44■■□□□ 1.98
SLC43A1-201ENST00000278426 GTF3C3Q9Y5Q9 886 aa27.41■■□□□ 1.98
SLC43A1-201ENST00000278426 CEP162Q5TB80 1403 aa27.39■■□□□ 1.98
SLC43A1-201ENST00000278426 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
SLC43A1-201ENST00000278426 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
SLC43A1-201ENST00000278426 UBTFP17480 764 aaKnown RBP27.31■■□□□ 1.96
SLC43A1-201ENST00000278426 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
SLC43A1-201ENST00000278426 CENPBP07199 599 aaPredicted RBP27.3■■□□□ 1.96
SLC43A1-201ENST00000278426 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
SLC43A1-201ENST00000278426 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
SLC43A1-201ENST00000278426 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.952e-6■■□□□ 13.3
SLC43A1-201ENST00000278426 EEA1Q15075 1411 aa27.16■■□□□ 1.94
SLC43A1-201ENST00000278426 GOLGA3Q08378 1498 aa27.06■■□□□ 1.92
SLC43A1-201ENST00000278426 ZNF316A6NFI3 1004 aaPredicted RBP27.05■■□□□ 1.92
SLC43A1-201ENST00000278426 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
SLC43A1-201ENST00000278426 YTHDC1Q96MU7 727 aaKnown RBP26.99■■□□□ 1.91
SLC43A1-201ENST00000278426 HNRNPUL2Q1KMD3 747 aaKnown RBP26.91■■□□□ 1.9
SLC43A1-201ENST00000278426 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
SLC43A1-201ENST00000278426 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
SLC43A1-201ENST00000278426 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
SLC43A1-201ENST00000278426 MIER1Q8N108 512 aa26.84■■□□□ 1.89
SLC43A1-201ENST00000278426 RANGAP1P46060 587 aaPredicted RBP26.83■■□□□ 1.89
SLC43A1-201ENST00000278426 CLIP1P30622 1438 aa26.83■■□□□ 1.88
SLC43A1-201ENST00000278426 MYT1Q01538 1121 aa26.79■■□□□ 1.88
SLC43A1-201ENST00000278426 KIF21BO75037 1637 aa26.78■■□□□ 1.88
SLC43A1-201ENST00000278426 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
SLC43A1-201ENST00000278426 BAZ1BQ9UIG0 1483 aaKnown RBP26.72■■□□□ 1.87
SLC43A1-201ENST00000278426 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
SLC43A1-201ENST00000278426 APLP2Q06481 763 aa26.71■■□□□ 1.87
SLC43A1-201ENST00000278426 VPS8Q8N3P4 1428 aa26.7■■□□□ 1.86
SLC43A1-201ENST00000278426 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
SLC43A1-201ENST00000278426 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
SLC43A1-201ENST00000278426 PRXQ9BXM0 1461 aa26.35■■□□□ 1.81
SLC43A1-201ENST00000278426 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
SLC43A1-201ENST00000278426 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
SLC43A1-201ENST00000278426 ERICH3Q5RHP9 1530 aa26.29■■□□□ 1.8
SLC43A1-201ENST00000278426 DHX57Q6P158 1386 aaKnown RBP26.28■■□□□ 1.8
SLC43A1-201ENST00000278426 CUX1P39880 1505 aa26.24■■□□□ 1.79
SLC43A1-201ENST00000278426 SUPT16HQ9Y5B9 1047 aaKnown RBP26.21■■□□□ 1.79
SLC43A1-201ENST00000278426 CLSPNQ9HAW4 1339 aa26.2■■□□□ 1.78
SLC43A1-201ENST00000278426 KIF27Q86VH2 1401 aa26.19■■□□□ 1.78
SLC43A1-201ENST00000278426 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
SLC43A1-201ENST00000278426 ITGAEP38570 1179 aa26.13■■□□□ 1.77
SLC43A1-201ENST00000278426 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
SLC43A1-201ENST00000278426 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
SLC43A1-201ENST00000278426 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
SLC43A1-201ENST00000278426 CFTRP13569 1480 aa26.04■■□□□ 1.76
SLC43A1-201ENST00000278426 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
SLC43A1-201ENST00000278426 TSHZ2Q9NRE2 1034 aa25.97■■□□□ 1.75
SLC43A1-201ENST00000278426 KCNH8Q96L42 1107 aa25.94■■□□□ 1.74
SLC43A1-201ENST00000278426 CUX2O14529 1486 aa25.93■■□□□ 1.74
SLC43A1-201ENST00000278426 IGF1RP08069 1367 aa25.93■■□□□ 1.74
SLC43A1-201ENST00000278426 RAB3GAP2Q9H2M9 1393 aa25.87■■□□□ 1.73
SLC43A1-201ENST00000278426 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
SLC43A1-201ENST00000278426 P3H3Q8IVL6 736 aa25.79■■□□□ 1.72
SLC43A1-201ENST00000278426 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
SLC43A1-201ENST00000278426 BCANQ96GW7 911 aa25.77■■□□□ 1.72
SLC43A1-201ENST00000278426 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
SLC43A1-201ENST00000278426 ATP1B4Q9UN42 357 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms