RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
FARP1-230ENST00000600380 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
FARP1-230ENST00000600380 ABCC9O60706 1549 aa24.44■■□□□ 1.5
FARP1-230ENST00000600380 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
FARP1-230ENST00000600380 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
FARP1-230ENST00000600380 NACADO15069 1562 aa23.53■■□□□ 1.36
FARP1-230ENST00000600380 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
FARP1-230ENST00000600380 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
FARP1-230ENST00000600380 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
FARP1-230ENST00000600380 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
FARP1-230ENST00000600380 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
FARP1-230ENST00000600380 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.264e-22■■□□□ 13.3
FARP1-230ENST00000600380 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
FARP1-230ENST00000600380 SHROOM4Q9ULL8 1493 aa22.7■■□□□ 1.22
FARP1-230ENST00000600380 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
FARP1-230ENST00000600380 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
FARP1-230ENST00000600380 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
FARP1-230ENST00000600380 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
FARP1-230ENST00000600380 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
FARP1-230ENST00000600380 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
FARP1-230ENST00000600380 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.11
FARP1-230ENST00000600380 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
FARP1-230ENST00000600380 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
FARP1-230ENST00000600380 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
FARP1-230ENST00000600380 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
FARP1-230ENST00000600380 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
FARP1-230ENST00000600380 WIZO95785 1651 aa21.71■■□□□ 1.07
FARP1-230ENST00000600380 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
FARP1-230ENST00000600380 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
FARP1-230ENST00000600380 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
FARP1-230ENST00000600380 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
FARP1-230ENST00000600380 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
FARP1-230ENST00000600380 NESP48681 1621 aa21.26■□□□□ 0.99
FARP1-230ENST00000600380 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
FARP1-230ENST00000600380 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
FARP1-230ENST00000600380 CFTRP13569 1480 aa21.07■□□□□ 0.96
FARP1-230ENST00000600380 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
FARP1-230ENST00000600380 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
FARP1-230ENST00000600380 KIF21AQ7Z4S6 1674 aa20.91■□□□□ 0.94
FARP1-230ENST00000600380 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
FARP1-230ENST00000600380 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
FARP1-230ENST00000600380 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
FARP1-230ENST00000600380 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
FARP1-230ENST00000600380 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
FARP1-230ENST00000600380 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
FARP1-230ENST00000600380 WDR62O43379 1518 aa20.68■□□□□ 0.9
FARP1-230ENST00000600380 CUX2O14529 1486 aa20.63■□□□□ 0.89
FARP1-230ENST00000600380 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
FARP1-230ENST00000600380 CUX1P39880 1505 aa20.58■□□□□ 0.88
FARP1-230ENST00000600380 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
FARP1-230ENST00000600380 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
FARP1-230ENST00000600380 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
FARP1-230ENST00000600380 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
FARP1-230ENST00000600380 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
FARP1-230ENST00000600380 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
FARP1-230ENST00000600380 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
FARP1-230ENST00000600380 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
FARP1-230ENST00000600380 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
FARP1-230ENST00000600380 SOGA1O94964 1423 aa20.38■□□□□ 0.85
FARP1-230ENST00000600380 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
FARP1-230ENST00000600380 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
FARP1-230ENST00000600380 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
FARP1-230ENST00000600380 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
FARP1-230ENST00000600380 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
FARP1-230ENST00000600380 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
FARP1-230ENST00000600380 WDR97A6NE52 1622 aa20.21■□□□□ 0.83
FARP1-230ENST00000600380 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
FARP1-230ENST00000600380 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
FARP1-230ENST00000600380 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
FARP1-230ENST00000600380 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
FARP1-230ENST00000600380 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
FARP1-230ENST00000600380 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
FARP1-230ENST00000600380 RUSC2Q8N2Y8 1516 aa20.06■□□□□ 0.8
FARP1-230ENST00000600380 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
FARP1-230ENST00000600380 KIF27Q86VH2 1401 aa20.02■□□□□ 0.79
FARP1-230ENST00000600380 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
FARP1-230ENST00000600380 IGF1RP08069 1367 aa20■□□□□ 0.79
FARP1-230ENST00000600380 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
FARP1-230ENST00000600380 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
FARP1-230ENST00000600380 FBLN2P98095 1184 aa19.95■□□□□ 0.78
FARP1-230ENST00000600380 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
FARP1-230ENST00000600380 SYNJ2O15056 1496 aa19.91■□□□□ 0.78
FARP1-230ENST00000600380 CHD1O14646 1710 aa19.9■□□□□ 0.78
FARP1-230ENST00000600380 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
FARP1-230ENST00000600380 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
FARP1-230ENST00000600380 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
FARP1-230ENST00000600380 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
FARP1-230ENST00000600380 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
FARP1-230ENST00000600380 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
FARP1-230ENST00000600380 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
FARP1-230ENST00000600380 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
FARP1-230ENST00000600380 CUL7Q14999 1698 aa19.78■□□□□ 0.76
FARP1-230ENST00000600380 NUP160Q12769 1436 aa19.75■□□□□ 0.75
FARP1-230ENST00000600380 EEA1Q15075 1411 aa19.75■□□□□ 0.75
FARP1-230ENST00000600380 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
FARP1-230ENST00000600380 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
FARP1-230ENST00000600380 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
FARP1-230ENST00000600380 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
FARP1-230ENST00000600380 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
FARP1-230ENST00000600380 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
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