Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.161e-7■□□□□ 10.6
SFPQP23246 CARHSP1-211ENST00000568117 521 ntTSL 315.81■□□□□ 0.121e-7■□□□□ 10.6
SFPQP23246 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.73□□□□□ -1.816e-7■□□□□ 10.6
SFPQP23246 PTPRK-214ENST00000495748 746 ntTSL 58.69□□□□□ -1.029e-7■□□□□ 10.6
SFPQP23246 RABGEF1-211ENST00000503687 4139 ntTSL 214.89□□□□□ -0.036e-6■□□□□ 10.6
SFPQP23246 ARID1B-209ENST00000494260 696 ntTSL 312.74□□□□□ -0.376e-6■□□□□ 10.6
SFPQP23246 ARID1B-218ENST00000636748 8853 ntTSL 210.21□□□□□ -0.786e-6■□□□□ 10.6
SFPQP23246 ARID1B-217ENST00000636607 406 ntTSL 38.3□□□□□ -1.086e-6■□□□□ 10.6
SFPQP23246 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.92■■□□□ 1.266e-7■□□□□ 10.6
SFPQP23246 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.74■■□□□ 1.076e-7■□□□□ 10.6
SFPQP23246 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.39■□□□□ 0.856e-7■□□□□ 10.6
SFPQP23246 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.72■□□□□ 0.756e-7■□□□□ 10.6
SFPQP23246 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.78□□□□□ -0.686e-7■□□□□ 10.6
SFPQP23246 MAP4K4-211ENST00000427603 526 ntTSL 410.69□□□□□ -0.76e-7■□□□□ 10.6
SFPQP23246 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.816e-7■□□□□ 10.6
SFPQP23246 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC9.94□□□□□ -0.826e-7■□□□□ 10.6
SFPQP23246 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.72□□□□□ -0.856e-7■□□□□ 10.6
SFPQP23246 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.916e-7■□□□□ 10.6
SFPQP23246 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.61□□□□□ -1.036e-7■□□□□ 10.6
SFPQP23246 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.08□□□□□ -1.126e-7■□□□□ 10.6
SFPQP23246 MAP4K4-207ENST00000417294 4251 ntTSL 57.11□□□□□ -1.276e-7■□□□□ 10.6
SFPQP23246 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.91e-6■□□□□ 10.6
SFPQP23246 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.761e-6■□□□□ 10.6
SFPQP23246 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.711e-6■□□□□ 10.6
SFPQP23246 ATXN2-204ENST00000392645 2842 ntTSL 216.39■□□□□ 0.211e-6■□□□□ 10.6
SFPQP23246 ATXN2-218ENST00000549455 568 ntTSL 416.32■□□□□ 0.21e-6■□□□□ 10.6
SFPQP23246 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.081e-6■□□□□ 10.6
SFPQP23246 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)13.47□□□□□ -0.251e-6■□□□□ 10.6
SFPQP23246 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.141e-6■□□□□ 10.6
SFPQP23246 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.321e-6■□□□□ 10.6
SFPQP23246 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.361e-6■□□□□ 10.6
SFPQP23246 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.69□□□□□ -1.665e-64■□□□□ 10.5
SFPQP23246 ANKRD17-210ENST00000561029 2717 ntTSL 525.36■■□□□ 1.651e-6■□□□□ 10.5
SFPQP23246 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.73■■□□□ 1.071e-6■□□□□ 10.5
SFPQP23246 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.581e-6■□□□□ 10.5
SFPQP23246 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.221e-6■□□□□ 10.5
SFPQP23246 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)7.38□□□□□ -1.231e-6■□□□□ 10.5
SFPQP23246 PTP4A1-203ENST00000473334 638 ntTSL 325.17■■□□□ 1.628e-11■□□□□ 10.5
SFPQP23246 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.4■□□□□ 0.74e-7■□□□□ 10.5
SFPQP23246 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.144e-7■□□□□ 10.5
SFPQP23246 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.184e-7■□□□□ 10.5
SFPQP23246 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.184e-7■□□□□ 10.5
SFPQP23246 CTNNB1-206ENST00000431914 634 ntTSL 412.6□□□□□ -0.394e-7■□□□□ 10.5
SFPQP23246 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.554e-7■□□□□ 10.5
SFPQP23246 CTNNB1-207ENST00000433400 596 ntTSL 46.31□□□□□ -1.44e-7■□□□□ 10.5
SFPQP23246 CTNNB1-209ENST00000450969 645 ntTSL 44.99□□□□□ -1.614e-7■□□□□ 10.5
SFPQP23246 CTNNB1-205ENST00000426215 563 ntTSL 44.43□□□□□ -1.74e-7■□□□□ 10.5
SFPQP23246 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.178e-7■□□□□ 10.5
SFPQP23246 CDC42EP1-203ENST00000430687 720 ntAPPRIS ALT2 TSL 320.01■□□□□ 0.798e-7■□□□□ 10.5
SFPQP23246 UBE2D3-214ENST00000503282 584 ntTSL 224.43■■□□□ 1.53e-6■□□□□ 10.5
SFPQP23246 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)23.96■■□□□ 1.433e-6■□□□□ 10.5
SFPQP23246 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.413e-6■□□□□ 10.5
SFPQP23246 UBE2D3-229ENST00000510129 582 ntTSL 323.82■■□□□ 1.43e-6■□□□□ 10.5
SFPQP23246 UBE2D3-220ENST00000505307 743 ntTSL 522.4■■□□□ 1.183e-6■□□□□ 10.5
SFPQP23246 UBE2D3-215ENST00000503418 662 ntTSL 421.76■■□□□ 1.073e-6■□□□□ 10.5
SFPQP23246 UBE2D3-213ENST00000502690 599 ntTSL 419.09■□□□□ 0.653e-6■□□□□ 10.5
SFPQP23246 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.393e-6■□□□□ 10.5
SFPQP23246 UBE2D3-228ENST00000508974 568 ntTSL 416.54■□□□□ 0.243e-6■□□□□ 10.5
SFPQP23246 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.193e-6■□□□□ 10.5
SFPQP23246 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.83□□□□□ -0.043e-6■□□□□ 10.5
SFPQP23246 UBE2D3-231ENST00000513098 702 ntTSL 314.07□□□□□ -0.163e-6■□□□□ 10.5
SFPQP23246 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.233e-6■□□□□ 10.5
SFPQP23246 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC12.5□□□□□ -0.413e-6■□□□□ 10.5
SFPQP23246 UBE2D3-219ENST00000505207 527 ntTSL 5 BASIC12.5□□□□□ -0.413e-6■□□□□ 10.5
SFPQP23246 UBE2D3-232ENST00000514755 593 ntTSL 412.22□□□□□ -0.453e-6■□□□□ 10.5
SFPQP23246 UBE2D3-212ENST00000502563 680 ntTSL 311.92□□□□□ -0.53e-6■□□□□ 10.5
SFPQP23246 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.543e-6■□□□□ 10.5
SFPQP23246 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC11.5□□□□□ -0.573e-6■□□□□ 10.5
SFPQP23246 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.583e-6■□□□□ 10.5
SFPQP23246 UBE2D3-227ENST00000508818 584 ntTSL 211.31□□□□□ -0.63e-6■□□□□ 10.5
SFPQP23246 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.743e-6■□□□□ 10.5
SFPQP23246 UBE2D3-223ENST00000508249 604 ntTSL 410.17□□□□□ -0.783e-6■□□□□ 10.5
SFPQP23246 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC10.12□□□□□ -0.793e-6■□□□□ 10.5
SFPQP23246 UBE2D3-222ENST00000508238 547 ntTSL 48.88□□□□□ -0.993e-6■□□□□ 10.5
SFPQP23246 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.023e-6■□□□□ 10.5
SFPQP23246 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.71□□□□□ -1.343e-6■□□□□ 10.5
SFPQP23246 UBE2D3-225ENST00000508476 601 ntTSL 35.67□□□□□ -1.53e-6■□□□□ 10.5
SFPQP23246 UBE2D3-226ENST00000508635 587 ntTSL 43.83□□□□□ -1.83e-6■□□□□ 10.5
SFPQP23246 ATXN1-206ENST00000483591 892 ntTSL 1 (best)9.07□□□□□ -0.965e-7■□□□□ 10.4
SFPQP23246 GPT2-203ENST00000562132 554 ntTSL 416.59■□□□□ 0.256e-9■□□□□ 10.4
SFPQP23246 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-9■□□□□ 10.4
SFPQP23246 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC14.41□□□□□ -0.16e-9■□□□□ 10.4
SFPQP23246 ATF7IP2-205ENST00000535850 1907 ntTSL 211.35□□□□□ -0.593e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.93□□□□□ -1.143e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.213e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.64□□□□□ -1.353e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.04□□□□□ -1.443e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-215ENST00000568027 3406 ntTSL 1 (best)5.57□□□□□ -1.523e-6■□□□□ 10.4
SFPQP23246 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.623e-6■□□□□ 10.4
SFPQP23246 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.232e-6■□□□□ 10.4
SFPQP23246 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.112e-6■□□□□ 10.4
SFPQP23246 FOXN3-204ENST00000553840 555 ntTSL 419.83■□□□□ 0.772e-6■□□□□ 10.4
SFPQP23246 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.062e-6■□□□□ 10.4
SFPQP23246 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.072e-6■□□□□ 10.4
SFPQP23246 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.742e-6■□□□□ 10.4
SFPQP23246 FOXN3-218ENST00000557718 398 ntTSL 56.44□□□□□ -1.382e-6■□□□□ 10.4
SFPQP23246 FOXN3-213ENST00000556916 467 ntTSL 34.2□□□□□ -1.742e-6■□□□□ 10.4
SFPQP23246 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.562e-6■□□□□ 10.4
SFPQP23246 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.65■■□□□ 1.542e-6■□□□□ 10.4
SFPQP23246 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.08■■□□□ 1.452e-6■□□□□ 10.4
Retrieved 100 of 4,991 protein–RNA pairs in 82.3 ms