RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
LGR4-202ENST00000389858 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
LGR4-202ENST00000389858 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
LGR4-202ENST00000389858 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
LGR4-202ENST00000389858 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.9
LGR4-202ENST00000389858 APLP2Q06481 763 aa32.66■■■□□ 2.82
LGR4-202ENST00000389858 FAM9AQ8IZU1 332 aaPredicted RBP32.38■■■□□ 2.77
LGR4-202ENST00000389858 PELP1Q8IZL8 1130 aaKnown RBP32.26■■■□□ 2.75
LGR4-202ENST00000389858 TTBK1Q5TCY1 1321 aaPredicted RBP32.02■■■□□ 2.72
LGR4-202ENST00000389858 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
LGR4-202ENST00000389858 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
LGR4-202ENST00000389858 RANGAP1P46060 587 aaPredicted RBP31.78■■■□□ 2.68
LGR4-202ENST00000389858 ATP1B4Q9UN42 357 aaPredicted RBP31.53■■■□□ 2.64
LGR4-202ENST00000389858 UBTFP17480 764 aaKnown RBP31.47■■■□□ 2.63
LGR4-202ENST00000389858 ZEB1P37275 1124 aaPredicted RBP31.43■■■□□ 2.62
LGR4-202ENST00000389858 CCER1Q8TC90 406 aaPredicted RBP31.42■■■□□ 2.62
LGR4-202ENST00000389858 CENPBP07199 599 aaPredicted RBP31.24■■■□□ 2.59
LGR4-202ENST00000389858 ERICH6Q7L0X2 663 aa30.85■■■□□ 2.53
LGR4-202ENST00000389858 PPARGC1BQ86YN6 1023 aaKnown RBP30.8■■■□□ 2.52
LGR4-202ENST00000389858 NEFLP07196 543 aa30.66■■■□□ 2.5
LGR4-202ENST00000389858 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
LGR4-202ENST00000389858 YTHDC1Q96MU7 727 aaKnown RBP30.6■■■□□ 2.49
LGR4-202ENST00000389858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.47■■■□□ 2.47
LGR4-202ENST00000389858 HNRNPUL2Q1KMD3 747 aaKnown RBP30.47■■■□□ 2.47
LGR4-202ENST00000389858 ITGAEP38570 1179 aa30.43■■■□□ 2.46
LGR4-202ENST00000389858 CHIC1Q5VXU3 224 aa30.38■■■□□ 2.45
LGR4-202ENST00000389858 MYT1LQ9UL68 1186 aa30.36■■■□□ 2.45
LGR4-202ENST00000389858 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
LGR4-202ENST00000389858 POLR3GLQ9BT43 218 aa30.14■■■□□ 2.42
LGR4-202ENST00000389858 HRCP23327 699 aa30.12■■■□□ 2.41
LGR4-202ENST00000389858 ABCC9O60706 1549 aa29.95■■■□□ 2.38
LGR4-202ENST00000389858 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
LGR4-202ENST00000389858 CNGB1Q14028 1251 aaPredicted RBP29.8■■■□□ 2.36
LGR4-202ENST00000389858 DAXXQ9UER7 740 aaPredicted RBP29.71■■■□□ 2.35
LGR4-202ENST00000389858 FAM50AQ14320 339 aaKnown RBP29.69■■■□□ 2.34
LGR4-202ENST00000389858 SLC4A1APQ9BWU0 796 aaKnown RBP29.6■■■□□ 2.33
LGR4-202ENST00000389858 MYT1Q01538 1121 aa29.59■■■□□ 2.33
LGR4-202ENST00000389858 TRIM52Q96A61 297 aa29.53■■■□□ 2.32
LGR4-202ENST00000389858 DIEXFQ68CQ4 756 aaKnown RBP29.48■■■□□ 2.31
LGR4-202ENST00000389858 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
LGR4-202ENST00000389858 FBLN2P98095 1184 aa29.3■■■□□ 2.28
LGR4-202ENST00000389858 CLSPNQ9HAW4 1339 aa29.19■■■□□ 2.26
LGR4-202ENST00000389858 ZNF326Q5BKZ1 582 aaKnown RBP29.17■■■□□ 2.26
LGR4-202ENST00000389858 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
LGR4-202ENST00000389858 ANP32CO43423 234 aa29.04■■■□□ 2.24
LGR4-202ENST00000389858 P3H3Q8IVL6 736 aa29.04■■■□□ 2.24
LGR4-202ENST00000389858 ZNF316A6NFI3 1004 aaPredicted RBP29.02■■■□□ 2.24
LGR4-202ENST00000389858 ARID3CA6NKF2 412 aa28.94■■■□□ 2.22
LGR4-202ENST00000389858 RTL5Q5HYW3 569 aaPredicted RBP28.93■■■□□ 2.22
LGR4-202ENST00000389858 BCANQ96GW7 911 aa28.8■■■□□ 2.2
LGR4-202ENST00000389858 CDK11AQ9UQ88 783 aaPredicted RBP28.79■■■□□ 2.2
LGR4-202ENST00000389858 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
LGR4-202ENST00000389858 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
LGR4-202ENST00000389858 ZBTB47Q9UFB7 747 aaPredicted RBP28.71■■■□□ 2.19
LGR4-202ENST00000389858 GTF3C3Q9Y5Q9 886 aa28.71■■■□□ 2.19
LGR4-202ENST00000389858 NEFMP07197 916 aa28.62■■■□□ 2.17
LGR4-202ENST00000389858 CANXP27824 592 aaKnown RBP28.6■■■□□ 2.17
LGR4-202ENST00000389858 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
LGR4-202ENST00000389858 SLC24A1O60721 1099 aa28.56■■■□□ 2.16
LGR4-202ENST00000389858 ESF1Q9H501 851 aaKnown RBP28.44■■■□□ 2.14
LGR4-202ENST00000389858 TONSLQ96HA7 1378 aa28.44■■■□□ 2.14
LGR4-202ENST00000389858 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
LGR4-202ENST00000389858 NPM1P06748 294 aaKnown RBP eCLIP28.36■■■□□ 2.13
LGR4-202ENST00000389858 CHGAP10645 457 aaKnown RBP28.35■■■□□ 2.13
LGR4-202ENST00000389858 ACIN1Q9UKV3 1341 aaKnown RBP28.31■■■□□ 2.12
LGR4-202ENST00000389858 STAG3Q9UJ98 1225 aa28.3■■■□□ 2.12
LGR4-202ENST00000389858 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
LGR4-202ENST00000389858 CHIC2Q9UKJ5 165 aa28.23■■■□□ 2.11
LGR4-202ENST00000389858 DDX10Q13206 875 aaKnown RBP28.15■■■□□ 2.1
LGR4-202ENST00000389858 ANP32AP39687 249 aaKnown RBP28.15■■■□□ 2.1
LGR4-202ENST00000389858 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.1
LGR4-202ENST00000389858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.14■■■□□ 2.12e-9■■■□□ 16.6
LGR4-202ENST00000389858 TSPY4P0CV99 314 aa28.13■■■□□ 2.09
LGR4-202ENST00000389858 TSPY10P0CW01 314 aa28.13■■■□□ 2.09
LGR4-202ENST00000389858 MTUS2Q5JR59 1369 aa28.12■■■□□ 2.09
LGR4-202ENST00000389858 HNRNPUQ00839 825 aaKnown RBP eCLIP28.11■■■□□ 2.09
LGR4-202ENST00000389858 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
LGR4-202ENST00000389858 PLPPR3Q6T4P5 718 aa28.07■■■□□ 2.08
LGR4-202ENST00000389858 FAM9BQ8IZU0 186 aa28.07■■■□□ 2.08
LGR4-202ENST00000389858 FKBP8Q14318 412 aa28.04■■■□□ 2.08
LGR4-202ENST00000389858 CLIP1P30622 1438 aa28.02■■■□□ 2.08
LGR4-202ENST00000389858 NPM2Q86SE8 214 aaKnown RBP28.02■■■□□ 2.08
LGR4-202ENST00000389858 TMC1Q8TDI8 760 aa27.97■■■□□ 2.07
LGR4-202ENST00000389858 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.06
LGR4-202ENST00000389858 KDM2AQ9Y2K7 1162 aa27.95■■■□□ 2.06
LGR4-202ENST00000389858 SALL2Q9Y467 1007 aaPredicted RBP27.94■■■□□ 2.06
LGR4-202ENST00000389858 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
LGR4-202ENST00000389858 EEA1Q15075 1411 aa27.84■■■□□ 2.05
LGR4-202ENST00000389858 UPF2Q9HAU5 1272 aaKnown RBP27.83■■■□□ 2.05
LGR4-202ENST00000389858 MRS2Q9HD23 443 aa27.83■■■□□ 2.05
LGR4-202ENST00000389858 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
LGR4-202ENST00000389858 HSP90AA1P07900 732 aaKnown RBP27.81■■■□□ 2.04
LGR4-202ENST00000389858 RRP7BPQ9NSQ0 103 aa27.81■■■□□ 2.04
LGR4-202ENST00000389858 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.8■■■□□ 2.04
LGR4-202ENST00000389858 GOLGA3Q08378 1498 aa27.79■■■□□ 2.04
LGR4-202ENST00000389858 PLEKHD1A6NEE1 506 aa27.76■■■□□ 2.04
LGR4-202ENST00000389858 EIF4G2P78344 907 aaKnown RBP eCLIP27.74■■■□□ 2.03
LGR4-202ENST00000389858 CCDC136Q96JN2 1154 aa27.74■■■□□ 2.03
LGR4-202ENST00000389858 KCNH8Q96L42 1107 aa27.74■■■□□ 2.03
LGR4-202ENST00000389858 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms