RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 NISCHQ9Y2I1 1504 aa42.94■■■■■ 4.46
UBE2D3-213ENST00000502690 CCDC180Q9P1Z9 1646 aa38.55■■■■□ 3.76
UBE2D3-213ENST00000502690 ABCC9O60706 1549 aa38.47■■■■□ 3.75
UBE2D3-213ENST00000502690 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
UBE2D3-213ENST00000502690 NACADO15069 1562 aa36.34■■■■□ 3.41
UBE2D3-213ENST00000502690 DCAF8L2P0C7V8 631 aa36.09■■■■□ 3.37
UBE2D3-213ENST00000502690 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
UBE2D3-213ENST00000502690 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
UBE2D3-213ENST00000502690 MYO15BQ96JP2 1530 aa35.83■■■■□ 3.33
UBE2D3-213ENST00000502690 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
UBE2D3-213ENST00000502690 BICRAQ9NZM4 1560 aa35.65■■■■□ 3.3
UBE2D3-213ENST00000502690 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
UBE2D3-213ENST00000502690 DCAF1Q9Y4B6 1507 aa35.43■■■■□ 3.26
UBE2D3-213ENST00000502690 SCRIBQ14160 1630 aa35.17■■■■□ 3.22
UBE2D3-213ENST00000502690 SHROOM4Q9ULL8 1493 aa34.98■■■■□ 3.19
UBE2D3-213ENST00000502690 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
UBE2D3-213ENST00000502690 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
UBE2D3-213ENST00000502690 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
UBE2D3-213ENST00000502690 SMARCA4P51532 1647 aa33.54■■■□□ 2.96
UBE2D3-213ENST00000502690 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
UBE2D3-213ENST00000502690 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
UBE2D3-213ENST00000502690 SMARCA2P51531 1590 aa33.36■■■□□ 2.93
UBE2D3-213ENST00000502690 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
UBE2D3-213ENST00000502690 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
UBE2D3-213ENST00000502690 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
UBE2D3-213ENST00000502690 MROH2BQ7Z745 1585 aa33.15■■■□□ 2.9
UBE2D3-213ENST00000502690 BAZ1BQ9UIG0 1483 aaKnown RBP33.15■■■□□ 2.9
UBE2D3-213ENST00000502690 NESP48681 1621 aa33.12■■■□□ 2.89
UBE2D3-213ENST00000502690 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
UBE2D3-213ENST00000502690 CUX2O14529 1486 aa33.04■■■□□ 2.88
UBE2D3-213ENST00000502690 DNAJC5Q9H3Z4 198 aa32.9■■■□□ 2.86
UBE2D3-213ENST00000502690 LAMC3Q9Y6N6 1575 aa32.8■■■□□ 2.84
UBE2D3-213ENST00000502690 WIZO95785 1651 aa32.8■■■□□ 2.84
UBE2D3-213ENST00000502690 THOC2Q8NI27 1593 aaKnown RBP32.79■■■□□ 2.84
UBE2D3-213ENST00000502690 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
UBE2D3-213ENST00000502690 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.8
UBE2D3-213ENST00000502690 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
UBE2D3-213ENST00000502690 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
UBE2D3-213ENST00000502690 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
UBE2D3-213ENST00000502690 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
UBE2D3-213ENST00000502690 WDR62O43379 1518 aa32.29■■■□□ 2.76
UBE2D3-213ENST00000502690 CEP164Q9UPV0 1460 aa32.2■■■□□ 2.75
UBE2D3-213ENST00000502690 CFTRP13569 1480 aa32.19■■■□□ 2.74
UBE2D3-213ENST00000502690 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
UBE2D3-213ENST00000502690 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
UBE2D3-213ENST00000502690 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
UBE2D3-213ENST00000502690 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
UBE2D3-213ENST00000502690 TOPBP1Q92547 1522 aa31.61■■■□□ 2.65
UBE2D3-213ENST00000502690 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
UBE2D3-213ENST00000502690 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
UBE2D3-213ENST00000502690 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
UBE2D3-213ENST00000502690 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
UBE2D3-213ENST00000502690 OSCARQ8IYS5 282 aa31.45■■■□□ 2.63
UBE2D3-213ENST00000502690 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
UBE2D3-213ENST00000502690 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
UBE2D3-213ENST00000502690 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
UBE2D3-213ENST00000502690 POLA1P09884 1462 aaPredicted RBP31.3■■■□□ 2.6
UBE2D3-213ENST00000502690 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.594e-14■■■■□ 25.1
UBE2D3-213ENST00000502690 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
UBE2D3-213ENST00000502690 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
UBE2D3-213ENST00000502690 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
UBE2D3-213ENST00000502690 CHD1O14646 1710 aa31.24■■■□□ 2.59
UBE2D3-213ENST00000502690 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
UBE2D3-213ENST00000502690 CUX1P39880 1505 aa31.14■■■□□ 2.58
UBE2D3-213ENST00000502690 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
UBE2D3-213ENST00000502690 ARHGEF11O15085 1522 aa31.11■■■□□ 2.57
UBE2D3-213ENST00000502690 SOGA1O94964 1423 aa31.07■■■□□ 2.57
UBE2D3-213ENST00000502690 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
UBE2D3-213ENST00000502690 WDR97A6NE52 1622 aa31■■■□□ 2.55
UBE2D3-213ENST00000502690 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
UBE2D3-213ENST00000502690 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.55
UBE2D3-213ENST00000502690 FBLN2P98095 1184 aa30.92■■■□□ 2.54
UBE2D3-213ENST00000502690 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
UBE2D3-213ENST00000502690 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
UBE2D3-213ENST00000502690 CLASP1Q7Z460 1538 aa30.81■■■□□ 2.52
UBE2D3-213ENST00000502690 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
UBE2D3-213ENST00000502690 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
UBE2D3-213ENST00000502690 ABCA5Q8WWZ7 1642 aa30.77■■■□□ 2.52
UBE2D3-213ENST00000502690 CYB5RLQ6IPT4 315 aa30.77■■■□□ 2.52
UBE2D3-213ENST00000502690 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
UBE2D3-213ENST00000502690 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
UBE2D3-213ENST00000502690 SYNJ2O15056 1496 aa30.72■■■□□ 2.51
UBE2D3-213ENST00000502690 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
UBE2D3-213ENST00000502690 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
UBE2D3-213ENST00000502690 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
UBE2D3-213ENST00000502690 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
UBE2D3-213ENST00000502690 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.485e-6■■■■■ 29.2
UBE2D3-213ENST00000502690 ADAMTS12P58397 1594 aa30.53■■■□□ 2.48
UBE2D3-213ENST00000502690 GRIN2AQ12879 1464 aa30.45■■■□□ 2.47
UBE2D3-213ENST00000502690 CEP170Q5SW79 1584 aa30.43■■■□□ 2.46
UBE2D3-213ENST00000502690 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
UBE2D3-213ENST00000502690 NUP160Q12769 1436 aa30.36■■■□□ 2.45
UBE2D3-213ENST00000502690 TRHP20396 242 aaPredicted RBP30.35■■■□□ 2.45
UBE2D3-213ENST00000502690 ERICH3Q5RHP9 1530 aa30.33■■■□□ 2.45
UBE2D3-213ENST00000502690 FHAD1B1AJZ9 1412 aa30.31■■■□□ 2.44
UBE2D3-213ENST00000502690 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
UBE2D3-213ENST00000502690 RUSC2Q8N2Y8 1516 aa30.11■■■□□ 2.41
UBE2D3-213ENST00000502690 PRG4Q92954 1404 aaPredicted RBP30.02■■■□□ 2.4
UBE2D3-213ENST00000502690 CUL7Q14999 1698 aa29.95■■■□□ 2.38
UBE2D3-213ENST00000502690 IGF1RP08069 1367 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms