RNA–Protein interactions for RNA: ENST00000483311.5

ATXN2-210, Transcript of ataxin 2, humanhuman

TSL 1 (best)

Gene ATXN2, Length 4,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-210ENST00000483311 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.29
ATXN2-210ENST00000483311 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
ATXN2-210ENST00000483311 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
ATXN2-210ENST00000483311 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
ATXN2-210ENST00000483311 ABCC9O60706 1549 aa19.37■□□□□ 0.69
ATXN2-210ENST00000483311 CCDC180Q9P1Z9 1646 aa19.34■□□□□ 0.69
ATXN2-210ENST00000483311 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
ATXN2-210ENST00000483311 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
ATXN2-210ENST00000483311 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
ATXN2-210ENST00000483311 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
ATXN2-210ENST00000483311 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
ATXN2-210ENST00000483311 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATXN2-210ENST00000483311 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
ATXN2-210ENST00000483311 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
ATXN2-210ENST00000483311 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
ATXN2-210ENST00000483311 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
ATXN2-210ENST00000483311 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.55
ATXN2-210ENST00000483311 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
ATXN2-210ENST00000483311 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
ATXN2-210ENST00000483311 NACADO15069 1562 aa18.42■□□□□ 0.54
ATXN2-210ENST00000483311 APLP2Q06481 763 aa18.4■□□□□ 0.54
ATXN2-210ENST00000483311 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
ATXN2-210ENST00000483311 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
ATXN2-210ENST00000483311 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
ATXN2-210ENST00000483311 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
ATXN2-210ENST00000483311 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
ATXN2-210ENST00000483311 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
ATXN2-210ENST00000483311 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
ATXN2-210ENST00000483311 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
ATXN2-210ENST00000483311 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
ATXN2-210ENST00000483311 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
ATXN2-210ENST00000483311 HRCP23327 699 aa17.91■□□□□ 0.46
ATXN2-210ENST00000483311 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
ATXN2-210ENST00000483311 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
ATXN2-210ENST00000483311 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
ATXN2-210ENST00000483311 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
ATXN2-210ENST00000483311 WIZO95785 1651 aa17.73■□□□□ 0.43
ATXN2-210ENST00000483311 ITGAEP38570 1179 aa17.67■□□□□ 0.42
ATXN2-210ENST00000483311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
ATXN2-210ENST00000483311 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
ATXN2-210ENST00000483311 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
ATXN2-210ENST00000483311 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
ATXN2-210ENST00000483311 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
ATXN2-210ENST00000483311 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
ATXN2-210ENST00000483311 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
ATXN2-210ENST00000483311 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
ATXN2-210ENST00000483311 SOGA1O94964 1423 aa17.44■□□□□ 0.38
ATXN2-210ENST00000483311 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
ATXN2-210ENST00000483311 EEA1Q15075 1411 aa17.43■□□□□ 0.38
ATXN2-210ENST00000483311 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
ATXN2-210ENST00000483311 FBLN2P98095 1184 aa17.37■□□□□ 0.37
ATXN2-210ENST00000483311 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
ATXN2-210ENST00000483311 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
ATXN2-210ENST00000483311 CLIP1P30622 1438 aa17.34■□□□□ 0.37
ATXN2-210ENST00000483311 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
ATXN2-210ENST00000483311 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
ATXN2-210ENST00000483311 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
ATXN2-210ENST00000483311 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
ATXN2-210ENST00000483311 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
ATXN2-210ENST00000483311 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
ATXN2-210ENST00000483311 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
ATXN2-210ENST00000483311 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
ATXN2-210ENST00000483311 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
ATXN2-210ENST00000483311 CUX2O14529 1486 aa17.14■□□□□ 0.33
ATXN2-210ENST00000483311 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
ATXN2-210ENST00000483311 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
ATXN2-210ENST00000483311 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.33
ATXN2-210ENST00000483311 NCAPD3P42695 1498 aa17.08■□□□□ 0.33
ATXN2-210ENST00000483311 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
ATXN2-210ENST00000483311 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
ATXN2-210ENST00000483311 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
ATXN2-210ENST00000483311 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
ATXN2-210ENST00000483311 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
ATXN2-210ENST00000483311 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
ATXN2-210ENST00000483311 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
ATXN2-210ENST00000483311 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
ATXN2-210ENST00000483311 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
ATXN2-210ENST00000483311 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
ATXN2-210ENST00000483311 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
ATXN2-210ENST00000483311 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
ATXN2-210ENST00000483311 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
ATXN2-210ENST00000483311 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
ATXN2-210ENST00000483311 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
ATXN2-210ENST00000483311 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
ATXN2-210ENST00000483311 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
ATXN2-210ENST00000483311 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
ATXN2-210ENST00000483311 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
ATXN2-210ENST00000483311 HMGXB3Q12766 1538 aa16.84■□□□□ 0.29
ATXN2-210ENST00000483311 CFTRP13569 1480 aa16.83■□□□□ 0.29
ATXN2-210ENST00000483311 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
ATXN2-210ENST00000483311 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
ATXN2-210ENST00000483311 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
ATXN2-210ENST00000483311 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
ATXN2-210ENST00000483311 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
ATXN2-210ENST00000483311 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
ATXN2-210ENST00000483311 IGF1RP08069 1367 aa16.76■□□□□ 0.27
ATXN2-210ENST00000483311 NESP48681 1621 aa16.76■□□□□ 0.27
ATXN2-210ENST00000483311 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
ATXN2-210ENST00000483311 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
ATXN2-210ENST00000483311 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms